Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is bglA [H]
Identifier: 220931115
GI number: 220931115
Start: 271978
End: 273489
Strand: Direct
Name: bglA [H]
Synonym: Hore_02670
Alternate gene names: 220931115
Gene position: 271978-273489 (Clockwise)
Preceding gene: 220931114
Following gene: 220931117
Centisome position: 10.55
GC content: 39.29
Gene sequence:
>1512_bases ATGTTAAGAAATAAAATTGTATCAGTGTTTTTATTATTAATTATTAGTACAGCTGGCGTTATGGCAACAGATGATAATGT AGGGCAAGAAAAACATCAAGTGCCCTATGATCAATTGACATTAGTCTGGAGTGATGAATTTAATTATACAGGATTCCCCG ATCCTGATAAATGGAGTTATGATGTAGGGGGGCATGGCTGGGGCAATGGAGAGAAACAGTACTACACTGAAAAAAGAAAA GAAAATGTCTGGGTAGAAGATGGAAGATTAATTATTATGGCCAGGAAAGAGGATTATAAGGGTAATAAATATACATCAGC TAGATTAGTTACCCGCAATAAAGGAGACTGGTTATATGGTAGAATAGAAGTGAGGGCCAAACTCCCCCGGGGAAGAGGAA CCTGGCCTGCTATCTGGATGCTTCCTACTGGCTGGATATATGGTAACTGGCCCAGCAGCGGGGAGATAGATATAATGGAA CATGTGGGTTATGATATGGGGGTAGTTCATGGTTCAGTACATACCAGGAGTTATAACCATCGACTGGGGACCCATAAAAC TAATACCATCAGGGTTGAAGAGGTTGATAAAAAATTTCATGTTTATAGTATTGAATGGTATCCTGGTAAAATACTTTTCT TTGTTGATAATATCCATTATTTTACCTTTAGGAATGAGGGAACCGGCTGGCGGGAATGGCCCTTTGATCAGCCCTTCCAT TTGATATTAAATATTGCAGTAGGTGGTGCCTGGGGTGGTCAAAAAGGAATTGATGACAGTATCTGGCCCCAGAGTATGGA GGTTGATTATGTAAGGGGTTATGATTTAAATATTGAAGAAAGGGATAAGATCCCTCCCGGAAAACCTGGTAATTTAAAGG CAGATTCTACTGCCATTTATGTAGATTTAAGCTGGGACCATTCTGTTGACAATTTTGGGGTAAAAGAATATGAAATTTAT TTAAATGATAGATTAATAGGAAAAACCAGTAATACCAAATTTAAGGTTAAAAAACTGGACCCTGAAACAAAATATAATTT TAAGGTCAGGGCAGTAGATTTTGCAGGAAATGTATCTGAGTATAGTTCTGTTCAGGTTAAAACTACGTCCCTGCCTTTAA AAATAATTCCGGGAAAAGTGGAAGCAGAGGAATACCTTATAATGGAGGATGGAATTGCCACTGAAACTACAACTGATGCT GGTGGTGGTGTTAATCTTTGTTATATAGGTGATGGTGACTGGATGGAGTATGTTCTGGAGGTACAGGAAACAGGAAATTA TCAAGTGGATTTTAGAGTGGCCGGGGTAATCAAGGGCAAAGTAGAGCTCAGAGATGAAAAGGGGAACACCCTGGCCAGTG TCGAAGTTCCTGCTACTGGTGACTGGCAAAAATGGGTTACTGTTTCCAGTGATAAATTTACCCTGGCAGCTGGAGTATAC CATATTAAGGTTTATGCTACAATTGGTGGCTTTAACCTTAACTGGTTTGAGATTAAGAAAGTTGACCAGTAG
Upstream 100 bases:
>100_bases TTTTTATCCAGTATACATATTAATAACGAAACCGGTTACGTGCAGGAGAACAAGATATTAATATTTTCCTGTATATTTTA TAGCAAAATGAGGTGGGGAC
Downstream 100 bases:
>100_bases GTAGGTTTTTTAATACATTTTTTATGGAATGTTGTTTATTGAATTAAAAAAAGAAATGGCTTGTAAAATTTATTTTAATA AGATAAGGCAAAAAACCTCA
Product: family 1 glycoside hydrolase6
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MLRNKIVSVFLLLIISTAGVMATDDNVGQEKHQVPYDQLTLVWSDEFNYTGFPDPDKWSYDVGGHGWGNGEKQYYTEKRK ENVWVEDGRLIIMARKEDYKGNKYTSARLVTRNKGDWLYGRIEVRAKLPRGRGTWPAIWMLPTGWIYGNWPSSGEIDIME HVGYDMGVVHGSVHTRSYNHRLGTHKTNTIRVEEVDKKFHVYSIEWYPGKILFFVDNIHYFTFRNEGTGWREWPFDQPFH LILNIAVGGAWGGQKGIDDSIWPQSMEVDYVRGYDLNIEERDKIPPGKPGNLKADSTAIYVDLSWDHSVDNFGVKEYEIY LNDRLIGKTSNTKFKVKKLDPETKYNFKVRAVDFAGNVSEYSSVQVKTTSLPLKIIPGKVEAEEYLIMEDGIATETTTDA GGGVNLCYIGDGDWMEYVLEVQETGNYQVDFRVAGVIKGKVELRDEKGNTLASVEVPATGDWQKWVTVSSDKFTLAAGVY HIKVYATIGGFNLNWFEIKKVDQ
Sequences:
>Translated_503_residues MLRNKIVSVFLLLIISTAGVMATDDNVGQEKHQVPYDQLTLVWSDEFNYTGFPDPDKWSYDVGGHGWGNGEKQYYTEKRK ENVWVEDGRLIIMARKEDYKGNKYTSARLVTRNKGDWLYGRIEVRAKLPRGRGTWPAIWMLPTGWIYGNWPSSGEIDIME HVGYDMGVVHGSVHTRSYNHRLGTHKTNTIRVEEVDKKFHVYSIEWYPGKILFFVDNIHYFTFRNEGTGWREWPFDQPFH LILNIAVGGAWGGQKGIDDSIWPQSMEVDYVRGYDLNIEERDKIPPGKPGNLKADSTAIYVDLSWDHSVDNFGVKEYEIY LNDRLIGKTSNTKFKVKKLDPETKYNFKVRAVDFAGNVSEYSSVQVKTTSLPLKIIPGKVEAEEYLIMEDGIATETTTDA GGGVNLCYIGDGDWMEYVLEVQETGNYQVDFRVAGVIKGKVELRDEKGNTLASVEVPATGDWQKWVTVSSDKFTLAAGVY HIKVYATIGGFNLNWFEIKKVDQ >Mature_503_residues MLRNKIVSVFLLLIISTAGVMATDDNVGQEKHQVPYDQLTLVWSDEFNYTGFPDPDKWSYDVGGHGWGNGEKQYYTEKRK ENVWVEDGRLIIMARKEDYKGNKYTSARLVTRNKGDWLYGRIEVRAKLPRGRGTWPAIWMLPTGWIYGNWPSSGEIDIME HVGYDMGVVHGSVHTRSYNHRLGTHKTNTIRVEEVDKKFHVYSIEWYPGKILFFVDNIHYFTFRNEGTGWREWPFDQPFH LILNIAVGGAWGGQKGIDDSIWPQSMEVDYVRGYDLNIEERDKIPPGKPGNLKADSTAIYVDLSWDHSVDNFGVKEYEIY LNDRLIGKTSNTKFKVKKLDPETKYNFKVRAVDFAGNVSEYSSVQVKTTSLPLKIIPGKVEAEEYLIMEDGIATETTTDA GGGVNLCYIGDGDWMEYVLEVQETGNYQVDFRVAGVIKGKVELRDEKGNTLASVEVPATGDWQKWVTVSSDKFTLAAGVY HIKVYATIGGFNLNWFEIKKVDQ
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 57421; Mature: 57421
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNKIVSVFLLLIISTAGVMATDDNVGQEKHQVPYDQLTLVWSDEFNYTGFPDPDKWSY CCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHEEEEECCCCCCCCCCCCCCEEE DVGGHGWGNGEKQYYTEKRKENVWVEDGRLIIMARKEDYKGNKYTSARLVTRNKGDWLYG ECCCCCCCCCCHHHHHHHHHCCEEEECCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEE RIEVRAKLPRGRGTWPAIWMLPTGWIYGNWPSSGEIDIMEHVGYDMGVVHGSVHTRSYNH EEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCEEEHHHCCCCEEEEECEEEECCCCC RLGTHKTNTIRVEEVDKKFHVYSIEWYPGKILFFVDNIHYFTFRNEGTGWREWPFDQPFH CCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEEEECEEEEEEECCCCCCCCCCCCCCEE LILNIAVGGAWGGQKGIDDSIWPQSMEVDYVRGYDLNIEERDKIPPGKPGNLKADSTAIY EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECEECCCCHHCCCCCCCCCCEECCCEEEE VDLSWDHSVDNFGVKEYEIYLNDRLIGKTSNTKFKVKKLDPETKYNFKVRAVDFAGNVSE EEEECCCCCCCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCC YSSVQVKTTSLPLKIIPGKVEAEEYLIMEDGIATETTTDAGGGVNLCYIGDGDWMEYVLE CCEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHEEEEE VQETGNYQVDFRVAGVIKGKVELRDEKGNTLASVEVPATGDWQKWVTVSSDKFTLAAGVY HHHCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEE HIKVYATIGGFNLNWFEIKKVDQ EEEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MLRNKIVSVFLLLIISTAGVMATDDNVGQEKHQVPYDQLTLVWSDEFNYTGFPDPDKWSY CCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHEEEEECCCCCCCCCCCCCCEEE DVGGHGWGNGEKQYYTEKRKENVWVEDGRLIIMARKEDYKGNKYTSARLVTRNKGDWLYG ECCCCCCCCCCHHHHHHHHHCCEEEECCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEE RIEVRAKLPRGRGTWPAIWMLPTGWIYGNWPSSGEIDIMEHVGYDMGVVHGSVHTRSYNH EEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCEEEHHHCCCCEEEEECEEEECCCCC RLGTHKTNTIRVEEVDKKFHVYSIEWYPGKILFFVDNIHYFTFRNEGTGWREWPFDQPFH CCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEEEECEEEEEEECCCCCCCCCCCCCCEE LILNIAVGGAWGGQKGIDDSIWPQSMEVDYVRGYDLNIEERDKIPPGKPGNLKADSTAIY EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECEECCCCHHCCCCCCCCCCEECCCEEEE VDLSWDHSVDNFGVKEYEIYLNDRLIGKTSNTKFKVKKLDPETKYNFKVRAVDFAGNVSE EEEECCCCCCCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCC YSSVQVKTTSLPLKIIPGKVEAEEYLIMEDGIATETTTDAGGGVNLCYIGDGDWMEYVLE CCEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHEEEEE VQETGNYQVDFRVAGVIKGKVELRDEKGNTLASVEVPATGDWQKWVTVSSDKFTLAAGVY HHHCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEE HIKVYATIGGFNLNWFEIKKVDQ EEEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]