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The map label for this gene is 220931114

Identifier: 220931114

GI number: 220931114

Start: 270932

End: 271507

Strand: Direct

Name: 220931114

Synonym: Hore_02660

Alternate gene names: NA

Gene position: 270932-271507 (Clockwise)

Preceding gene: 220931113

Following gene: 220931115

Centisome position: 10.51

GC content: 41.84

Gene sequence:

>576_bases
ATGAATCATGGAAGCCGTCCCCCCTGTCAGGGAATCCTCTATACAGTTAAACCCGGTGATACATTATCAAAAATTGCTAG
ACGATATAACCTAACAGTAAGGGATATAGTAAGTGCAAACCCGCAAATTAGTGATCCTGATAAAATAACAGTTGGCCAGG
TTATTTGTATTCCAAAGGTAGCATCTCAATTAAGAGAATGTGCTATAGTTCTGGCTTTGTCCCGGGAAGCTACTGTTGCT
CTCCCTGAAATAGCTGGAGGAGTTGTTTTGGTCCAGAGGGCTGGAGAAGGGAAATATGCCCTCACCTTTGCAGCTACAGG
TTTACCCAACCCCGGATCTTTAGGGGAATTTGATACTTATCTAGGTTCAATTAACATTAACGGGCAAGAGTATTCAGCAG
TATTGAGGGTTTCAGCACCTTTTGAGCAGGAACCAACCTGGGCTGGTACGAGGGTAATAAATATAAATCCTTTTAATTAT
CCTGACAGTACCGTTACTATTTTTCCCTTCAACCTTGAAACAAGTATCAGGTCTGGACCTATATTAGGAGGAACCATAGC
TGAATGTAAACGATAA

Upstream 100 bases:

>100_bases
GGGAAGTGTTAAAGAAATAACGGGTAGTTAGTTTAGAAAAATAACAATAAGGGGGTATCTACATATAATAATAGAAAATA
AATGAATTCAGGTGATTACT

Downstream 100 bases:

>100_bases
TTTAATTTCAACCCCCATTAAGGGGGTTTTTATTTTAAGGAAATTATCTTTTTCTTCCTATTTCTTTGAGATAATAAGGT
TTTTTCACTCTGGTTTATCC

Product: Peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNHGSRPPCQGILYTVKPGDTLSKIARRYNLTVRDIVSANPQISDPDKITVGQVICIPKVASQLRECAIVLALSREATVA
LPEIAGGVVLVQRAGEGKYALTFAATGLPNPGSLGEFDTYLGSININGQEYSAVLRVSAPFEQEPTWAGTRVININPFNY
PDSTVTIFPFNLETSIRSGPILGGTIAECKR

Sequences:

>Translated_191_residues
MNHGSRPPCQGILYTVKPGDTLSKIARRYNLTVRDIVSANPQISDPDKITVGQVICIPKVASQLRECAIVLALSREATVA
LPEIAGGVVLVQRAGEGKYALTFAATGLPNPGSLGEFDTYLGSININGQEYSAVLRVSAPFEQEPTWAGTRVININPFNY
PDSTVTIFPFNLETSIRSGPILGGTIAECKR
>Mature_191_residues
MNHGSRPPCQGILYTVKPGDTLSKIARRYNLTVRDIVSANPQISDPDKITVGQVICIPKVASQLRECAIVLALSREATVA
LPEIAGGVVLVQRAGEGKYALTFAATGLPNPGSLGEFDTYLGSININGQEYSAVLRVSAPFEQEPTWAGTRVININPFNY
PDSTVTIFPFNLETSIRSGPILGGTIAECKR

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20474; Mature: 20474

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHGSRPPCQGILYTVKPGDTLSKIARRYNLTVRDIVSANPQISDPDKITVGQVICIPKV
CCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEHHHHCCCCCCCCCCCEEECEEEEHHHH
ASQLRECAIVLALSREATVALPEIAGGVVLVQRAGEGKYALTFAATGLPNPGSLGEFDTY
HHHHHHEEEEEEECCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHE
LGSININGQEYSAVLRVSAPFEQEPTWAGTRVININPFNYPDSTVTIFPFNLETSIRSGP
EEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCC
ILGGTIAECKR
CCCCHHHHHCC
>Mature Secondary Structure
MNHGSRPPCQGILYTVKPGDTLSKIARRYNLTVRDIVSANPQISDPDKITVGQVICIPKV
CCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEHHHHCCCCCCCCCCCEEECEEEEHHHH
ASQLRECAIVLALSREATVALPEIAGGVVLVQRAGEGKYALTFAATGLPNPGSLGEFDTY
HHHHHHEEEEEEECCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHE
LGSININGQEYSAVLRVSAPFEQEPTWAGTRVININPFNYPDSTVTIFPFNLETSIRSGP
EEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCC
ILGGTIAECKR
CCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA