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The map label for this gene is dksA [H]

Identifier: 220918712

GI number: 220918712

Start: 4041130

End: 4041498

Strand: Direct

Name: dksA [H]

Synonym: A2cp1_3620

Alternate gene names: 220918712

Gene position: 4041130-4041498 (Clockwise)

Preceding gene: 220918710

Following gene: 220918713

Centisome position: 80.35

GC content: 75.61

Gene sequence:

>369_bases
ATGAACGCACGCGAGACCGAACGCTACCGCCGGATCCTGGCGGCGCAGCTCGAGGCGCTGGTGGGCCAGGGCGAGCGCGC
CGTGCACGAGATGGCCGACTCGGAGGGCGGCGGCGAGGTCGCCATCCCGGACCCGAACGATCGCGCCACCGCGGAGGAGC
GCCGCAACTGGGCGCTGCGCCTGCGCGATCGCGACCGCCGGCTCCTCGGCAAGGTCCAGGCGGCGCTGGCCCGGCTCGAC
GCGGGCACGTTCGGCACCTGCACGTCCTGCGGTGCGCCCATCAGCGCGGCGCGCCTGCGCGCGCGCCCGGTCACGGACCT
GTGCATCGCGTGCAAGACCGAGGCGGAGCGCGTGGAGCGGCCGAGATAG

Upstream 100 bases:

>100_bases
CGTGCACGTGCCGAGGATACGGGACGTGTCGCGCCCCCGGCAAGGACGCTTGTGGCGCGCGGACGCGAGCGCTAGCGTCG
ATCGCCACGCGGAGGTCGCC

Downstream 100 bases:

>100_bases
CGCCCGGCCCGGGGCGGTGCTCACCGGTGGTGCCTGGCCCGGGGCCGGGCTAGATTGGCGGCACCATGGCGCCCAAGAAG
ATCCGCAAGGCCGTGATCCC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLD
AGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVERPR

Sequences:

>Translated_122_residues
MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLD
AGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVERPR
>Mature_122_residues
MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLD
AGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVERPR

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=116, Percent_Identity=43.1034482758621, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 13470; Mature: 13470

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHEEE
LRDRDRRLLGKVQAALARLDAGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVER
ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHCCC
PR
CC
>Mature Secondary Structure
MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHEEE
LRDRDRRLLGKVQAALARLDAGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVER
ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHCCC
PR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8063112 [H]