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The map label for this gene is 220918420

Identifier: 220918420

GI number: 220918420

Start: 3701588

End: 3702496

Strand: Direct

Name: 220918420

Synonym: A2cp1_3324

Alternate gene names: NA

Gene position: 3701588-3702496 (Clockwise)

Preceding gene: 220918418

Following gene: 220918422

Centisome position: 73.6

GC content: 74.92

Gene sequence:

>909_bases
ATGATGACCACCTCCGCCACCACGCCTGGACACCCCGCGGAGCGGAGCTCGGCGTTCGAGCGCCTCCGCCCCCGCCTGTT
CGGCATCGCCTACCGCATGCTCGGCACCGTCCCGGACGCGGAGGACGTGCTGCAGACCGCCTACCTGCGCTGGCACGAGG
CGGACGTCGCGGCGGTGCAGAACCCGGAGGCCTGGCTGGTGGCGGTCACGAGCCGGCTCGCGGTCGATCGGCTGCGCCAG
GCGAGCGGCGAGCGCCAGCGCTACGTCGGCGACTGGTTGCCCGAGCCGCTCGTCACCGGCGCCGCGCCTCCCGCCGACGC
GCGCTCCGAGCTGGCCTCCGACCTGTCCATGGCGTTCCTGGTGCTGCTCGAGCGGCTCTCGCCGGACGAGCGCGCCGCGC
TGCTGCTCCGCGACGTGTTCGGCGCCGGCTACGCGGAGATCGCCAGGGTGCTGGACCGGAGCGAGGAGGCCTGCCGCCAG
GTGGTGCACCGGGCGCGGCTGCGGGTGCGCGAGGGGCGGCCGCGGTTCGAGGTGCCGCTCGAGGCCAAGCACCGGCTGGT
GGCTCGCTTCCTGGACCGGCTGGCCGCGGCCGACGAGCAGGCACTGCTCGCGCTCGTGTCCGACGACGCCACCTGGACCT
CCGACGGCGGCGGCAAGGTCCACGTCGCTCGCGGGCTCCGCGGCAGCGCGCGCATCGTCCGGTTCATGCTGAACGTGGCC
CGCAAGGGCGCCGGCCGGACGCGGCGCGAGCTGGTGTGGGTCAACGGCGAGCCCGCCATCCTCACCACCCTCGACGGCCG
GCCGTTCTCGACCATCTCGTTCGCCACCGACGGCGAGCGCGTGACCGCGTTCTACGCGGTGCTCAACCCGGACAAGTTGC
GGCGGGTCGAGCCCGCTCGGGCGCGCTGA

Upstream 100 bases:

>100_bases
GGCGCGTCCCCGTCCCGTGACCGGCCGGCCCGCGACGCCCCGATCGGACCGGGCGACGGCATCGCGGTCACGGCACCGTC
ACCTCGATCGTCTCGGCTCC

Downstream 100 bases:

>100_bases
GCCGATCAGCCGGGCGGGCGCCGGCGGCGCGCGACGTCGGAGCCGCCCGGTCCCGTGCGCCGGACCCACTCGATGGCGTC
GCGCACGCGCCGGGGCACGA

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF-Family Protein RNA Polymerase Sigma Factor; ECF Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MMTTSATTPGHPAERSSAFERLRPRLFGIAYRMLGTVPDAEDVLQTAYLRWHEADVAAVQNPEAWLVAVTSRLAVDRLRQ
ASGERQRYVGDWLPEPLVTGAAPPADARSELASDLSMAFLVLLERLSPDERAALLLRDVFGAGYAEIARVLDRSEEACRQ
VVHRARLRVREGRPRFEVPLEAKHRLVARFLDRLAAADEQALLALVSDDATWTSDGGGKVHVARGLRGSARIVRFMLNVA
RKGAGRTRRELVWVNGEPAILTTLDGRPFSTISFATDGERVTAFYAVLNPDKLRRVEPARAR

Sequences:

>Translated_302_residues
MMTTSATTPGHPAERSSAFERLRPRLFGIAYRMLGTVPDAEDVLQTAYLRWHEADVAAVQNPEAWLVAVTSRLAVDRLRQ
ASGERQRYVGDWLPEPLVTGAAPPADARSELASDLSMAFLVLLERLSPDERAALLLRDVFGAGYAEIARVLDRSEEACRQ
VVHRARLRVREGRPRFEVPLEAKHRLVARFLDRLAAADEQALLALVSDDATWTSDGGGKVHVARGLRGSARIVRFMLNVA
RKGAGRTRRELVWVNGEPAILTTLDGRPFSTISFATDGERVTAFYAVLNPDKLRRVEPARAR
>Mature_302_residues
MMTTSATTPGHPAERSSAFERLRPRLFGIAYRMLGTVPDAEDVLQTAYLRWHEADVAAVQNPEAWLVAVTSRLAVDRLRQ
ASGERQRYVGDWLPEPLVTGAAPPADARSELASDLSMAFLVLLERLSPDERAALLLRDVFGAGYAEIARVLDRSEEACRQ
VVHRARLRVREGRPRFEVPLEAKHRLVARFLDRLAAADEQALLALVSDDATWTSDGGGKVHVARGLRGSARIVRFMLNVA
RKGAGRTRRELVWVNGEPAILTTLDGRPFSTISFATDGERVTAFYAVLNPDKLRRVEPARAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33499; Mature: 33499

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTSATTPGHPAERSSAFERLRPRLFGIAYRMLGTVPDAEDVLQTAYLRWHEADVAAVQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCC
NPEAWLVAVTSRLAVDRLRQASGERQRYVGDWLPEPLVTGAAPPADARSELASDLSMAFL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHH
VLLERLSPDERAALLLRDVFGAGYAEIARVLDRSEEACRQVVHRARLRVREGRPRFEVPL
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH
EAKHRLVARFLDRLAAADEQALLALVSDDATWTSDGGGKVHVARGLRGSARIVRFMLNVA
HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCEECCCCCEEEEECCCCHHHHHHHHHHHHH
RKGAGRTRRELVWVNGEPAILTTLDGRPFSTISFATDGERVTAFYAVLNPDKLRRVEPAR
HHCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEECHHHHHCCCCCC
AR
CC
>Mature Secondary Structure
MMTTSATTPGHPAERSSAFERLRPRLFGIAYRMLGTVPDAEDVLQTAYLRWHEADVAAVQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCC
NPEAWLVAVTSRLAVDRLRQASGERQRYVGDWLPEPLVTGAAPPADARSELASDLSMAFL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHH
VLLERLSPDERAALLLRDVFGAGYAEIARVLDRSEEACRQVVHRARLRVREGRPRFEVPL
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH
EAKHRLVARFLDRLAAADEQALLALVSDDATWTSDGGGKVHVARGLRGSARIVRFMLNVA
HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCEECCCCCEEEEECCCCHHHHHHHHHHHHH
RKGAGRTRRELVWVNGEPAILTTLDGRPFSTISFATDGERVTAFYAVLNPDKLRRVEPAR
HHCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEECHHHHHCCCCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA