| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is dcp [H]
Identifier: 220918398
GI number: 220918398
Start: 3675715
End: 3677868
Strand: Direct
Name: dcp [H]
Synonym: A2cp1_3302
Alternate gene names: 220918398
Gene position: 3675715-3677868 (Clockwise)
Preceding gene: 220918391
Following gene: 220918401
Centisome position: 73.09
GC content: 72.52
Gene sequence:
>2154_bases ATGTCGGCACTCGTCGCGAGCGCGCTCGCACAGCTCGTCCTGCTCTCCAGCCCGCCCGCGGCCCCCGCGCGCGCGGAGGT CCCCGTGAACAACCCGCTGCTCGCCCCGTGGGCGGGCCCGCACGGCGGCGTCCCGCCGTTCGACGTGGCGCGCGTCGATC AGCTCGCCCCGGCCATCGAGGCCGGCATGGCCGCGAAGCTCGCCGCCGTCGAGGCGATCGCCGCCGACCCGGCCGCGCCC ACCTTCGACAACACGCTGGCCGCGATGGAGCGCTCCGGCCGGGCGCTCGACCGCGCCATGACGGTCTTCGGGGTGTTCTC CACCTCGATGAGCACGCCGGAGTTCCAGGCGGTGGAGCGCGAGCTGGCGCCGAAGCTGGCCGCGTTCGACGACCGGATCA CGCAGAACGAGAAGCTGTTCGCGCGCATCGCCGCCGTCTACGATGCGCGCGAGACCTCCTGCAGGACGCCCGAGCAGAAG CGGCTCGCCTGGCTCTATTACACGACGTTCGTCCGCGCCGGCGCGAAGCTCGACCCGGCCGCGAAGCAGCGCGTCGCCGC GATCAACGAGCGGCTCGCCACGCTGTACACGAAGTTCGCGCAGGACGTGCTGGCCGACGAGTCCGGCTACACCCTGGTCC TCGAGGACGAGGCGGCGCTGGCGGGCCTGCCGGCGAGCGTGCGCGCCGGCATGGCGGCCGCGGCCGCGACCCGCGGGAAG GCCGGCAAGTGGGCGGTGCTCAACACGCGCTCCAGCGTCGAGCCGTTCCTGGCCTACTCGGAGCGGCGCGACCTCCGCGA GCGGGTCTGGCGCGACTTCACCAGCCGCGGCGATCACGGCGACGCGCACGACACCAAGGCGGCCATCACCGAGATCCTGA AGCTGCGCGCCGAGCGCGCGAAGCTGCTCGGGTACCCGACGCACGCGCACTGGCGGCTCGAGGACTCGATGGCGAAGACG CCCGGGCGCGCCATGGCGCTCATGGAGGCGGTCTGGCCGGCGGCGGTGGCGCGGGTCCGCGAGGAGGTCGCCGACATGCA GGCGGTGGCCGACCGCGAGGGCGCGGGCATCACCATCGAGCCGTGGGACTACCGCTTCTACGCGGAGAAGGTCCGCAAGG CGAAGTACGACCTCGACGAGAACGAGGTGAAGCCGTACCTCCAGCTCGAGAAGCTGCGCGAGGCGATGTTCTGGGTGGCC GGCCGCCTGTTCGACCTGCACTTCACGCCGGCGAAGGGCGTGCCGGTGTACCACCCCGACGTGCGCGTCTGGGAGGTGAA GGACGGCAAGGGCCGGCACGTGGGCCGCTGGTACTTCGACCCGTACGCGCGCGACGGGAAGCGCTCGGGCGCGTGGATGA ACGCGTACCGCGCGCAGGAGCGGTTCGACGGCGAGATCCCGACCATCGTCTCGAACAACGCGAACTTCGTGAAGGGGAAG CCGGGCGAGCCGGTGCTGGTGAGCTGGACCGACGCCGAGACCCTGTTCCACGAGTTCGGGCACGCGCTGCACGGCCTCGC CTCCAGCGTCGGGTACCCGTCGCTCTCCGGCACCGCGGTGGCGCGCGACTACGTGGAGTTCCCGTCGCAGCTCCTGGAGC GCTGGCTCGAGACGCCGGAGGTGCTGGACCGCTTCGCGCGCCACGTGAAGACCGGCAAGCCGCTGCCGCGGGCGCTGGTG GCGAAGATCCAGAAGGCGTCCACCTTCAACCAGGGCTTCGGGACGGTGGAGTACCTCTCGGCCGCGCTGGTGGATCTGAA GATGCACCTCGCCGGCTCGACCGAGATCGACCCCGCCGCGTTCGAGAAGGACACGCTCGCCGCGCTGGGCATGCCGCGCG AGGTGGTGATGCGCCACCGGCCGCCGCACTTCCTCCACGTGTTCTCCGGCGACGGCTACTCCGCCGGCTACTACAGCTAC CTCTGGGCCGACACCCTCAGCACCGACGCGTACGAGGCGTTCACCGAGGCGAAGGGACCCTACGATCGGGCGGTCGCCGC CCGCCTGCGCGAGCACGTGTTCTCCGCCGGGAACACCGTCGACCCCGCCGACGCGTACCGCGCGTTCCGCGGGCGCGACC CCGGCATCGGCGCGCTCATGCGCAAGCGCGGCTTCCCGGTGCCGGCGGCGGAGCCGGGCGCGGCGCCGCGGTAA
Upstream 100 bases:
>100_bases TCGCACCGCGACGCGCACGTGATCCGGCGCGACGAGGGACTTGACCCGCTCGCGGCCCCGCGCGAGAGAACCGGGAGCCC ATTCGGCGCGGAGGTCGTAC
Downstream 100 bases:
>100_bases GCGCGCGCGGCACGCGATCCGCGATCCGGTCCCGGGATCGCGGATCGCGCCGACCAGGCCCTGCGCCCGGCGGCGTCCCG GCTACGGCCCGGGCGCGGCG
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 717; Mature: 716
Protein sequence:
>717_residues MSALVASALAQLVLLSSPPAAPARAEVPVNNPLLAPWAGPHGGVPPFDVARVDQLAPAIEAGMAAKLAAVEAIAADPAAP TFDNTLAAMERSGRALDRAMTVFGVFSTSMSTPEFQAVERELAPKLAAFDDRITQNEKLFARIAAVYDARETSCRTPEQK RLAWLYYTTFVRAGAKLDPAAKQRVAAINERLATLYTKFAQDVLADESGYTLVLEDEAALAGLPASVRAGMAAAAATRGK AGKWAVLNTRSSVEPFLAYSERRDLRERVWRDFTSRGDHGDAHDTKAAITEILKLRAERAKLLGYPTHAHWRLEDSMAKT PGRAMALMEAVWPAAVARVREEVADMQAVADREGAGITIEPWDYRFYAEKVRKAKYDLDENEVKPYLQLEKLREAMFWVA GRLFDLHFTPAKGVPVYHPDVRVWEVKDGKGRHVGRWYFDPYARDGKRSGAWMNAYRAQERFDGEIPTIVSNNANFVKGK PGEPVLVSWTDAETLFHEFGHALHGLASSVGYPSLSGTAVARDYVEFPSQLLERWLETPEVLDRFARHVKTGKPLPRALV AKIQKASTFNQGFGTVEYLSAALVDLKMHLAGSTEIDPAAFEKDTLAALGMPREVVMRHRPPHFLHVFSGDGYSAGYYSY LWADTLSTDAYEAFTEAKGPYDRAVAARLREHVFSAGNTVDPADAYRAFRGRDPGIGALMRKRGFPVPAAEPGAAPR
Sequences:
>Translated_717_residues MSALVASALAQLVLLSSPPAAPARAEVPVNNPLLAPWAGPHGGVPPFDVARVDQLAPAIEAGMAAKLAAVEAIAADPAAP TFDNTLAAMERSGRALDRAMTVFGVFSTSMSTPEFQAVERELAPKLAAFDDRITQNEKLFARIAAVYDARETSCRTPEQK RLAWLYYTTFVRAGAKLDPAAKQRVAAINERLATLYTKFAQDVLADESGYTLVLEDEAALAGLPASVRAGMAAAAATRGK AGKWAVLNTRSSVEPFLAYSERRDLRERVWRDFTSRGDHGDAHDTKAAITEILKLRAERAKLLGYPTHAHWRLEDSMAKT PGRAMALMEAVWPAAVARVREEVADMQAVADREGAGITIEPWDYRFYAEKVRKAKYDLDENEVKPYLQLEKLREAMFWVA GRLFDLHFTPAKGVPVYHPDVRVWEVKDGKGRHVGRWYFDPYARDGKRSGAWMNAYRAQERFDGEIPTIVSNNANFVKGK PGEPVLVSWTDAETLFHEFGHALHGLASSVGYPSLSGTAVARDYVEFPSQLLERWLETPEVLDRFARHVKTGKPLPRALV AKIQKASTFNQGFGTVEYLSAALVDLKMHLAGSTEIDPAAFEKDTLAALGMPREVVMRHRPPHFLHVFSGDGYSAGYYSY LWADTLSTDAYEAFTEAKGPYDRAVAARLREHVFSAGNTVDPADAYRAFRGRDPGIGALMRKRGFPVPAAEPGAAPR >Mature_716_residues SALVASALAQLVLLSSPPAAPARAEVPVNNPLLAPWAGPHGGVPPFDVARVDQLAPAIEAGMAAKLAAVEAIAADPAAPT FDNTLAAMERSGRALDRAMTVFGVFSTSMSTPEFQAVERELAPKLAAFDDRITQNEKLFARIAAVYDARETSCRTPEQKR LAWLYYTTFVRAGAKLDPAAKQRVAAINERLATLYTKFAQDVLADESGYTLVLEDEAALAGLPASVRAGMAAAAATRGKA GKWAVLNTRSSVEPFLAYSERRDLRERVWRDFTSRGDHGDAHDTKAAITEILKLRAERAKLLGYPTHAHWRLEDSMAKTP GRAMALMEAVWPAAVARVREEVADMQAVADREGAGITIEPWDYRFYAEKVRKAKYDLDENEVKPYLQLEKLREAMFWVAG RLFDLHFTPAKGVPVYHPDVRVWEVKDGKGRHVGRWYFDPYARDGKRSGAWMNAYRAQERFDGEIPTIVSNNANFVKGKP GEPVLVSWTDAETLFHEFGHALHGLASSVGYPSLSGTAVARDYVEFPSQLLERWLETPEVLDRFARHVKTGKPLPRALVA KIQKASTFNQGFGTVEYLSAALVDLKMHLAGSTEIDPAAFEKDTLAALGMPREVVMRHRPPHFLHVFSGDGYSAGYYSYL WADTLSTDAYEAFTEAKGPYDRAVAARLREHVFSAGNTVDPADAYRAFRGRDPGIGALMRKRGFPVPAAEPGAAPR
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=598, Percent_Identity=28.7625418060201, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI14149738, Length=645, Percent_Identity=25.4263565891473, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI156105687, Length=640, Percent_Identity=22.96875, Blast_Score=145, Evalue=2e-34, Organism=Escherichia coli, GI1787819, Length=681, Percent_Identity=39.9412628487518, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1789913, Length=688, Percent_Identity=30.6686046511628, Blast_Score=320, Evalue=2e-88, Organism=Caenorhabditis elegans, GI71999758, Length=331, Percent_Identity=25.6797583081571, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32565901, Length=569, Percent_Identity=20.2108963093146, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319793, Length=696, Percent_Identity=23.9942528735632, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6322715, Length=640, Percent_Identity=19.6875, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21356111, Length=703, Percent_Identity=22.475106685633, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI20129717, Length=394, Percent_Identity=25.1269035532995, Blast_Score=113, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 78845; Mature: 78714
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVASALAQLVLLSSPPAAPARAEVPVNNPLLAPWAGPHGGVPPFDVARVDQLAPAIE CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH AGMAAKLAAVEAIAADPAAPTFDNTLAAMERSGRALDRAMTVFGVFSTSMSTPEFQAVER HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ELAPKLAAFDDRITQNEKLFARIAAVYDARETSCRTPEQKRLAWLYYTTFVRAGAKLDPA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHH AKQRVAAINERLATLYTKFAQDVLADESGYTLVLEDEAALAGLPASVRAGMAAAAATRGK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCC AGKWAVLNTRSSVEPFLAYSERRDLRERVWRDFTSRGDHGDAHDTKAAITEILKLRAERA CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH KLLGYPTHAHWRLEDSMAKTPGRAMALMEAVWPAAVARVREEVADMQAVADREGAGITIE HHHCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC PWDYRFYAEKVRKAKYDLDENEVKPYLQLEKLREAMFWVAGRLFDLHFTPAKGVPVYHPD CCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCC VRVWEVKDGKGRHVGRWYFDPYARDGKRSGAWMNAYRAQERFDGEIPTIVSNNANFVKGK CEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCC PGEPVLVSWTDAETLFHEFGHALHGLASSVGYPSLSGTAVARDYVEFPSQLLERWLETPE CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH VLDRFARHVKTGKPLPRALVAKIQKASTFNQGFGTVEYLSAALVDLKMHLAGSTEIDPAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH FEKDTLAALGMPREVVMRHRPPHFLHVFSGDGYSAGYYSYLWADTLSTDAYEAFTEAKGP CCHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCC YDRAVAARLREHVFSAGNTVDPADAYRAFRGRDPGIGALMRKRGFPVPAAEPGAAPR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SALVASALAQLVLLSSPPAAPARAEVPVNNPLLAPWAGPHGGVPPFDVARVDQLAPAIE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH AGMAAKLAAVEAIAADPAAPTFDNTLAAMERSGRALDRAMTVFGVFSTSMSTPEFQAVER HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ELAPKLAAFDDRITQNEKLFARIAAVYDARETSCRTPEQKRLAWLYYTTFVRAGAKLDPA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHH AKQRVAAINERLATLYTKFAQDVLADESGYTLVLEDEAALAGLPASVRAGMAAAAATRGK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHCCC AGKWAVLNTRSSVEPFLAYSERRDLRERVWRDFTSRGDHGDAHDTKAAITEILKLRAERA CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH KLLGYPTHAHWRLEDSMAKTPGRAMALMEAVWPAAVARVREEVADMQAVADREGAGITIE HHHCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC PWDYRFYAEKVRKAKYDLDENEVKPYLQLEKLREAMFWVAGRLFDLHFTPAKGVPVYHPD CCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCC VRVWEVKDGKGRHVGRWYFDPYARDGKRSGAWMNAYRAQERFDGEIPTIVSNNANFVKGK CEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCC PGEPVLVSWTDAETLFHEFGHALHGLASSVGYPSLSGTAVARDYVEFPSQLLERWLETPE CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH VLDRFARHVKTGKPLPRALVAKIQKASTFNQGFGTVEYLSAALVDLKMHLAGSTEIDPAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH FEKDTLAALGMPREVVMRHRPPHFLHVFSGDGYSAGYYSYLWADTLSTDAYEAFTEAKGP CCHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCC YDRAVAARLREHVFSAGNTVDPADAYRAFRGRDPGIGALMRKRGFPVPAAEPGAAPR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]