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The map label for this gene is 220918059

Identifier: 220918059

GI number: 220918059

Start: 3272978

End: 3275041

Strand: Reverse

Name: 220918059

Synonym: A2cp1_2960

Alternate gene names: NA

Gene position: 3275041-3272978 (Counterclockwise)

Preceding gene: 220918060

Following gene: 220918056

Centisome position: 65.12

GC content: 69.67

Gene sequence:

>2064_bases
ATGCACTTCCAGCCTGTCTCGAAGGGAACGGCGGCGGCCGCGCTGGCCATCGCCTCCATGCTGGCTCTGGGCTGTTCCGG
CACCAACTCCACCTTCGAAGACCCTGCTGGACAGGCGCCGGGTGTCACCGTCTCCCCGGGCGCGGCCACGGTCTACCCCG
AGCAGAGCCTCACGTTCCAGGCGAACGTGACGGGATATGCGAACCCCGGGGTCACCTGGTCGATCGCGGACGGGACGAAC
GGCGGCACGATCAGCGCCGATGGCTTCTACACCGCCCCCTCGAGCACCGGCACGTACCGGGTCGTCGCGACCAGCGTCGC
GAACCCGTCCCTGAGCGCCAGCGCCACCGTCACCGTCTCGACGGCCCCCCCGCCGCCGCCGGACGGCTCGACGATGACGG
CGGCGCACCGGACCTCCGGCGTCGCGCCGCTGGCGGTGTTCTTCGACGCGGTCGACACCACGCCCACCGGCAGCGCCTCG
CCCTTCAACTGGGCCAGCAACGTGTACCAGCCCGCCGACCTCGAGGGCGCCCAGTACACGTGGAGCTTCGGTGACCCGGG
CTCCGGAAACTGGAGCACGACCGGGAAGTCGAAGAACGCGGCGACCGGGTACACGGCCGCCCACGTCTTCGAGAACCCCG
GCACGTACACCGTGTCGCTCACCGTCGTGGACACCGCCGGGGTCACGCGGACCTACACCCAGACCATCAACGTCTCGGCG
TTCAGCGGCACGACGTTCTTCGTCGCCGCGAACGGCAGCGACTCGAACAACGGCACGTCGCAGTCCACGCCCTTCCAGAC
GGTCAATCGCGCGATGACGGCCGCGCTGGCCGCCAGCGGTCCGGTGCAGGTCCTCTTCCGGCGGGGCGACACGTTCTCCG
CCTCCTCCATCTACGCGATCACCAAGCCCGGCCCCGGGATCATCGGTGCGTATGGCTCGGGCAACCGCCCGGTCATCAAC
GTCGCGGACCTGGGGGATGGGAACGTCTTCAGCCCGCGGGGAACGGGCGCCGACTGGCGCATCATGGATCTCGACATGCG
CGGTGCGAACCCGTCGACCGCGACCGGGCCCATCGGGCCGGACGTCTCGCATCAGGGCGTGAACCTGCTCGTCCTGCGGC
TGCGTGCCAGCAACTTCTACGTCGGGCTCGGATGGGGAGACTGGACGCCGATCTACGCGACGCCCCACGACGGCATGTTC
ATCGTGGACAGCGAGTCCCCGAACAACGGCGGGTACGGGATGTACCTGGGCGGCCGGAGGATCGCACTCCTCGGAAACGT
CGCGAGCGATCCCGGCCAGACGCACGTGTGCCGGGTATGGCAGGCGCACAAGGCCGTGATCTCGAACAACCAGTTCCTGC
GCCCCGGAGGACAGCGCCACGCGCTCAAGCTGCACGGGCCGCAGCTGAACGACGGCCGCCCCGAGACGCGGTGGGTCTCC
ATCAACGACAACGTGTTCCAGGCGAGCGGCACGTCCCAGTGGACGGTCTCGATCGGCTCGGCCAGCAGCGTGGCGAACGA
GAACGGTCCCGTCTCGCACCTGGTGCTCGAGCGAAACCGGTTCGGCGGGTCGGCGTCGCTGGTCGCGGACATCGAGACGG
AGTCGAGCCACGCCATGGTCCGCAACAACGTCTTCGACGACACGCTCGCGTCCGGCGTGACCTCGATCCTGTGGGAGCAG
CGCAACAGCGTCGTCCCTGCGCCCTCGGACATCCGCATCTACAACAACACGTTCTACAACGGGTCGGCCAGCGGCGGCTC
CGGGCTCATCCGGACCAACTCGACGACGACCAACCTCCGGCTCCGGAACAACCTGTACGCCGCCGACTCGACCGGGAACA
TCAGCCTCGTCCAGGGGACGCGCGGCGCCGGCTGGGCGGAAGACGTCAACCTGGTGGTCGGCCTGTCGGCGCTCGCGAAC
CCCGGGGGCGGGGACTTCACGCTGCCGGTCGGCTCTCCGGCGGTGGACGCAGGCCTGAACCTGTCCGACGTCCGGGGCGA
CTACCTGCTCGCGCCGCGGCCGCGGGGTGCGGGGCTGGACGTCGGAGCCTTCGAGTCACGCTGA

Upstream 100 bases:

>100_bases
ACAAGACCCTTAGCCTAGTCAGGTCCGGTAATGGTCTCCCTGTCGGTGTCGTGTTTATAAGGGACAGCCTCGTAGACACC
GATCAAGGAGAGACCCACCG

Downstream 100 bases:

>100_bases
GCCCGACCCGGGCGCCGGCTGCTGCCTGACCGATGCCGTCCTCCAGCTCGGGGGACGGCATCGCCGTCAGAACGATCGCT
TCCAGCGCTGGACGAGATCG

Product: PKD domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MHFQPVSKGTAAAALAIASMLALGCSGTNSTFEDPAGQAPGVTVSPGAATVYPEQSLTFQANVTGYANPGVTWSIADGTN
GGTISADGFYTAPSSTGTYRVVATSVANPSLSASATVTVSTAPPPPPDGSTMTAAHRTSGVAPLAVFFDAVDTTPTGSAS
PFNWASNVYQPADLEGAQYTWSFGDPGSGNWSTTGKSKNAATGYTAAHVFENPGTYTVSLTVVDTAGVTRTYTQTINVSA
FSGTTFFVAANGSDSNNGTSQSTPFQTVNRAMTAALAASGPVQVLFRRGDTFSASSIYAITKPGPGIIGAYGSGNRPVIN
VADLGDGNVFSPRGTGADWRIMDLDMRGANPSTATGPIGPDVSHQGVNLLVLRLRASNFYVGLGWGDWTPIYATPHDGMF
IVDSESPNNGGYGMYLGGRRIALLGNVASDPGQTHVCRVWQAHKAVISNNQFLRPGGQRHALKLHGPQLNDGRPETRWVS
INDNVFQASGTSQWTVSIGSASSVANENGPVSHLVLERNRFGGSASLVADIETESSHAMVRNNVFDDTLASGVTSILWEQ
RNSVVPAPSDIRIYNNTFYNGSASGGSGLIRTNSTTTNLRLRNNLYAADSTGNISLVQGTRGAGWAEDVNLVVGLSALAN
PGGGDFTLPVGSPAVDAGLNLSDVRGDYLLAPRPRGAGLDVGAFESR

Sequences:

>Translated_687_residues
MHFQPVSKGTAAAALAIASMLALGCSGTNSTFEDPAGQAPGVTVSPGAATVYPEQSLTFQANVTGYANPGVTWSIADGTN
GGTISADGFYTAPSSTGTYRVVATSVANPSLSASATVTVSTAPPPPPDGSTMTAAHRTSGVAPLAVFFDAVDTTPTGSAS
PFNWASNVYQPADLEGAQYTWSFGDPGSGNWSTTGKSKNAATGYTAAHVFENPGTYTVSLTVVDTAGVTRTYTQTINVSA
FSGTTFFVAANGSDSNNGTSQSTPFQTVNRAMTAALAASGPVQVLFRRGDTFSASSIYAITKPGPGIIGAYGSGNRPVIN
VADLGDGNVFSPRGTGADWRIMDLDMRGANPSTATGPIGPDVSHQGVNLLVLRLRASNFYVGLGWGDWTPIYATPHDGMF
IVDSESPNNGGYGMYLGGRRIALLGNVASDPGQTHVCRVWQAHKAVISNNQFLRPGGQRHALKLHGPQLNDGRPETRWVS
INDNVFQASGTSQWTVSIGSASSVANENGPVSHLVLERNRFGGSASLVADIETESSHAMVRNNVFDDTLASGVTSILWEQ
RNSVVPAPSDIRIYNNTFYNGSASGGSGLIRTNSTTTNLRLRNNLYAADSTGNISLVQGTRGAGWAEDVNLVVGLSALAN
PGGGDFTLPVGSPAVDAGLNLSDVRGDYLLAPRPRGAGLDVGAFESR
>Mature_687_residues
MHFQPVSKGTAAAALAIASMLALGCSGTNSTFEDPAGQAPGVTVSPGAATVYPEQSLTFQANVTGYANPGVTWSIADGTN
GGTISADGFYTAPSSTGTYRVVATSVANPSLSASATVTVSTAPPPPPDGSTMTAAHRTSGVAPLAVFFDAVDTTPTGSAS
PFNWASNVYQPADLEGAQYTWSFGDPGSGNWSTTGKSKNAATGYTAAHVFENPGTYTVSLTVVDTAGVTRTYTQTINVSA
FSGTTFFVAANGSDSNNGTSQSTPFQTVNRAMTAALAASGPVQVLFRRGDTFSASSIYAITKPGPGIIGAYGSGNRPVIN
VADLGDGNVFSPRGTGADWRIMDLDMRGANPSTATGPIGPDVSHQGVNLLVLRLRASNFYVGLGWGDWTPIYATPHDGMF
IVDSESPNNGGYGMYLGGRRIALLGNVASDPGQTHVCRVWQAHKAVISNNQFLRPGGQRHALKLHGPQLNDGRPETRWVS
INDNVFQASGTSQWTVSIGSASSVANENGPVSHLVLERNRFGGSASLVADIETESSHAMVRNNVFDDTLASGVTSILWEQ
RNSVVPAPSDIRIYNNTFYNGSASGGSGLIRTNSTTTNLRLRNNLYAADSTGNISLVQGTRGAGWAEDVNLVVGLSALAN
PGGGDFTLPVGSPAVDAGLNLSDVRGDYLLAPRPRGAGLDVGAFESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71054; Mature: 71054

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFQPVSKGTAAAALAIASMLALGCSGTNSTFEDPAGQAPGVTVSPGAATVYPEQSLTFQ
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEEEE
ANVTGYANPGVTWSIADGTNGGTISADGFYTAPSSTGTYRVVATSVANPSLSASATVTVS
EEECEECCCCEEEEECCCCCCCEEECCCEEECCCCCCEEEEEEEECCCCCCCCEEEEEEE
TAPPPPPDGSTMTAAHRTSGVAPLAVFFDAVDTTPTGSASPFNWASNVYQPADLEGAQYT
CCCCCCCCCCEEEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
WSFGDPGSGNWSTTGKSKNAATGYTAAHVFENPGTYTVSLTVVDTAGVTRTYTQTINVSA
EECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEEEE
FSGTTFFVAANGSDSNNGTSQSTPFQTVNRAMTAALAASGPVQVLFRRGDTFSASSIYAI
ECCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE
TKPGPGIIGAYGSGNRPVINVADLGDGNVFSPRGTGADWRIMDLDMRGANPSTATGPIGP
ECCCCCEEECCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DVSHQGVNLLVLRLRASNFYVGLGWGDWTPIYATPHDGMFIVDSESPNNGGYGMYLGGRR
CCCCCCCEEEEEEEECCCEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEECCEE
IALLGNVASDPGQTHVCRVWQAHKAVISNNQFLRPGGQRHALKLHGPQLNDGRPETRWVS
EEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCCEEEEE
INDNVFQASGTSQWTVSIGSASSVANENGPVSHLVLERNRFGGSASLVADIETESSHAMV
ECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEE
RNNVFDDTLASGVTSILWEQRNSVVPAPSDIRIYNNTFYNGSASGGSGLIRTNSTTTNLR
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCCCCCCCEEEECCCEEEEE
LRNNLYAADSTGNISLVQGTRGAGWAEDVNLVVGLSALANPGGGDFTLPVGSPAVDAGLN
EECCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCHHCCCC
LSDVRGDYLLAPRPRGAGLDVGAFESR
HHHCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHFQPVSKGTAAAALAIASMLALGCSGTNSTFEDPAGQAPGVTVSPGAATVYPEQSLTFQ
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEEEE
ANVTGYANPGVTWSIADGTNGGTISADGFYTAPSSTGTYRVVATSVANPSLSASATVTVS
EEECEECCCCEEEEECCCCCCCEEECCCEEECCCCCCEEEEEEEECCCCCCCCEEEEEEE
TAPPPPPDGSTMTAAHRTSGVAPLAVFFDAVDTTPTGSASPFNWASNVYQPADLEGAQYT
CCCCCCCCCCEEEEEHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
WSFGDPGSGNWSTTGKSKNAATGYTAAHVFENPGTYTVSLTVVDTAGVTRTYTQTINVSA
EECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEEEE
FSGTTFFVAANGSDSNNGTSQSTPFQTVNRAMTAALAASGPVQVLFRRGDTFSASSIYAI
ECCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE
TKPGPGIIGAYGSGNRPVINVADLGDGNVFSPRGTGADWRIMDLDMRGANPSTATGPIGP
ECCCCCEEECCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DVSHQGVNLLVLRLRASNFYVGLGWGDWTPIYATPHDGMFIVDSESPNNGGYGMYLGGRR
CCCCCCCEEEEEEEECCCEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEECCEE
IALLGNVASDPGQTHVCRVWQAHKAVISNNQFLRPGGQRHALKLHGPQLNDGRPETRWVS
EEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCCEEEEE
INDNVFQASGTSQWTVSIGSASSVANENGPVSHLVLERNRFGGSASLVADIETESSHAMV
ECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEE
RNNVFDDTLASGVTSILWEQRNSVVPAPSDIRIYNNTFYNGSASGGSGLIRTNSTTTNLR
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCCCCCCCEEEECCCEEEEE
LRNNLYAADSTGNISLVQGTRGAGWAEDVNLVVGLSALANPGGGDFTLPVGSPAVDAGLN
EECCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCHHCCCC
LSDVRGDYLLAPRPRGAGLDVGAFESR
HHHCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA