Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918036
Identifier: 220918036
GI number: 220918036
Start: 3248811
End: 3249371
Strand: Reverse
Name: 220918036
Synonym: A2cp1_2937
Alternate gene names: NA
Gene position: 3249371-3248811 (Counterclockwise)
Preceding gene: 220918037
Following gene: 220918035
Centisome position: 64.61
GC content: 68.63
Gene sequence:
>561_bases ATGCGCGTCAACATTGATGAAATCAAGGAGGCAGGCCTCCGCCGGAGCTGGGACGTCGCCCGCGAGCAGGTGGACGACAT CCTGCAAGGCGACAAGGCCGGCTACCGCGCGCGCGGTCCGCTCCACGTCGACGCGAAGCTGGAGAAGATCGATCGAAGGG TGCGGGTCGATGCGCACGGCAGGGCGGAGCTGACGGTGCCCTGCGGCCGGTGCCTCCAGCCGGTGTCGCTGGACCAGCCG GTGGATTTCGAGTTGACGCTCGTCCCCTCGGACGAGTACGTGGACGAGCCCCGAGGCGAGCATGACTCGAGCACCGGCCC GATCGGCGGCAGCTTCGAGGCCGAGCGGGCGGACGAGGAGGTCTACACGGGCAAGGTCGTCGACCTCGACCCGATCCTCC GCGAGCAGCTGCTCCTGGCCGTGCCGGGCTATCCGGTGTGCAAGGACGACTGCAAGGGACTCTGCCCCGTGTGCGGGGCC AACCTGAACGATCGCGAGTGCGGCTGCGATCGCCACGTTCCGGACCCGCGCTGGGCGGGCCTCAAGAACGTGAAGCTGTA G
Upstream 100 bases:
>100_bases CTGGGAAGTCCGGCGCGCGCGGGCAACGGCCCGGCGCGCCTTGACTTCGCGGGATCGACCCCTATAATGAGGCCCTTTTT CGCCTCGGAAAGCTGTATAA
Downstream 100 bases:
>100_bases TGAGCGCGCCGCGGCTGCGGCGCGCGGAAGGAGCACGACGTGGGCGTTCCCAAGAAGCGGACGAGCAGCATGCGGCGCGA TCGGCGCCGCGCCGCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRVNIDEIKEAGLRRSWDVAREQVDDILQGDKAGYRARGPLHVDAKLEKIDRRVRVDAHGRAELTVPCGRCLQPVSLDQP VDFELTLVPSDEYVDEPRGEHDSSTGPIGGSFEAERADEEVYTGKVVDLDPILREQLLLAVPGYPVCKDDCKGLCPVCGA NLNDRECGCDRHVPDPRWAGLKNVKL
Sequences:
>Translated_186_residues MRVNIDEIKEAGLRRSWDVAREQVDDILQGDKAGYRARGPLHVDAKLEKIDRRVRVDAHGRAELTVPCGRCLQPVSLDQP VDFELTLVPSDEYVDEPRGEHDSSTGPIGGSFEAERADEEVYTGKVVDLDPILREQLLLAVPGYPVCKDDCKGLCPVCGA NLNDRECGCDRHVPDPRWAGLKNVKL >Mature_186_residues MRVNIDEIKEAGLRRSWDVAREQVDDILQGDKAGYRARGPLHVDAKLEKIDRRVRVDAHGRAELTVPCGRCLQPVSLDQP VDFELTLVPSDEYVDEPRGEHDSSTGPIGGSFEAERADEEVYTGKVVDLDPILREQLLLAVPGYPVCKDDCKGLCPVCGA NLNDRECGCDRHVPDPRWAGLKNVKL
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20657; Mature: 20657
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVNIDEIKEAGLRRSWDVAREQVDDILQGDKAGYRARGPLHVDAKLEKIDRRVRVDAHG CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHEEECCCC RAELTVPCGRCLQPVSLDQPVDFELTLVPSDEYVDEPRGEHDSSTGPIGGSFEAERADEE CEEEEECHHHHCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCH VYTGKVVDLDPILREQLLLAVPGYPVCKDDCKGLCPVCGANLNDRECGCDRHVPDPRWAG HHCCCEEECCHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCC LKNVKL CCCCCC >Mature Secondary Structure MRVNIDEIKEAGLRRSWDVAREQVDDILQGDKAGYRARGPLHVDAKLEKIDRRVRVDAHG CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHEEECCCC RAELTVPCGRCLQPVSLDQPVDFELTLVPSDEYVDEPRGEHDSSTGPIGGSFEAERADEE CEEEEECHHHHCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCH VYTGKVVDLDPILREQLLLAVPGYPVCKDDCKGLCPVCGANLNDRECGCDRHVPDPRWAG HHCCCEEECCHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCC LKNVKL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA