Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is rpmF

Identifier: 220918035

GI number: 220918035

Start: 3248592

End: 3248771

Strand: Reverse

Name: rpmF

Synonym: A2cp1_2936

Alternate gene names: 220918035

Gene position: 3248771-3248592 (Counterclockwise)

Preceding gene: 220918036

Following gene: 220918034

Centisome position: 64.6

GC content: 67.78

Gene sequence:

>180_bases
GTGGGCGTTCCCAAGAAGCGGACGAGCAGCATGCGGCGCGATCGGCGCCGCGCCGCGAACTTCAAGCTGAAGCCGGTCAA
CGTGGTGAAGTGCCCGAAGTGCAAGGAGCCCGTGCTCCCGCACCGCGCGTGCCCGTCCTGCGGGACGTACAAGGGCGAGC
AGATCACCGAGGCGTCATAG

Upstream 100 bases:

>100_bases
CGGCTGCGATCGCCACGTTCCGGACCCGCGCTGGGCGGGCCTCAAGAACGTGAAGCTGTAGTGAGCGCGCCGCGGCTGCG
GCGCGCGGAAGGAGCACGAC

Downstream 100 bases:

>100_bases
GCGCGATGGTCGGGAAGATCGCGCCCATCGCCGTGGATGCGATGGGGGGCGACCACGCCCCCGGCGCGATCGTACAGGGT
GCGGTTAACGCAGCGCGTAA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MGVPKKRTSSMRRDRRRAANFKLKPVNVVKCPKCKEPVLPHRACPSCGTYKGEQITEAS

Sequences:

>Translated_59_residues
MGVPKKRTSSMRRDRRRAANFKLKPVNVVKCPKCKEPVLPHRACPSCGTYKGEQITEAS
>Mature_58_residues
GVPKKRTSSMRRDRRRAANFKLKPVNVVKCPKCKEPVLPHRACPSCGTYKGEQITEAS

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_ANADE (Q2ILJ1)

Other databases:

- EMBL:   CP000251
- RefSeq:   YP_465959.1
- ProteinModelPortal:   Q2ILJ1
- SMR:   Q2ILJ1
- STRING:   Q2ILJ1
- GeneID:   3890271
- GenomeReviews:   CP000251_GR
- KEGG:   ade:Adeh_2752
- eggNOG:   NOG78241
- HOGENOM:   HBG728381
- OMA:   YGKKQVF
- ProtClustDB:   PRK12286
- BioCyc:   ADEH290397:ADEH_2752-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6643; Mature: 6512

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPKKRTSSMRRDRRRAANFKLKPVNVVKCPKCKEPVLPHRACPSCGTYKGEQITEAS
CCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GVPKKRTSSMRRDRRRAANFKLKPVNVVKCPKCKEPVLPHRACPSCGTYKGEQITEAS
CCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA