Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is leuS [H]
Identifier: 220918010
GI number: 220918010
Start: 3223150
End: 3225648
Strand: Reverse
Name: leuS [H]
Synonym: A2cp1_2911
Alternate gene names: 220918010
Gene position: 3225648-3223150 (Counterclockwise)
Preceding gene: 220918012
Following gene: 220918009
Centisome position: 64.14
GC content: 72.19
Gene sequence:
>2499_bases ATGTCGATGAACGAGCGTTACGAGCCCCAGTCGATCGAGCCGCGCTGGCAGCGCCGGTGGGAGGAGGCGGGCGCCTTCAA GGCGGGTCGCCGTCCCGACGCCGACACCCGCTACGTCCTCGAGATGTTCCCGTATCCGTCGGGCGCCATGCACATGGGCC ACGCCCGCGTGTACACCATCGGCGACGCGCTGGCGCGCCACCTGCGCATGCGCGGGTTCGACGTCCTCCACCCGATCGGC TTCGACGCCCTCGGCCTGCCGGCCGAGAACGCCGCCATCAAGGACGGCCGCCACCCGGCGGAGCGGACGCGCGAGAACGT GGTCTCGTTCCGCGCCGAGATGAAGCGGCTCGGCTACAGCTTCGACTGGGAGCGCGAGCTGGTCACCGCCGACGCGTCCT ACTACCGCTGGAACCAGTGGTTCTTCCTGAAGCTGCTGGAGAAGGGCATCGCCTACCGGCGCCAGGGCAAGGTGAACTGG TGCACCGGCTGCCAGACGGTCATCGCGAACGAGCAGGTGGTGGACGACAACCGGTGCGAGCGCTGCGGCTCGCCGGTGGT CGAGAAGATCCACCCGGAGTGGGCGTTCCGCATCACCGCCTACGCCCAGCAGCTGCTGGACGGGCTGGACGGCCTGAAGG ACTGGCCGGACCGCGTCACGACCATGCAGCGCAACTGGATCGGCAAGAGCGAGGGCGCCGAGGTGGACTTCGCGCTCGCC GCCGGCGGCGCCGCGGTGAAGGTGTTCACCACCCGGGTCGACACGATCTACGGCTGCACGTACGTGGTGCTGGCGCCGGA GCACCCGCTGGTCGCGCAGGTCACCGCGCCGGAGCGCCGCGCCGAGGTGGACGCGTTCGTCGCGCGCATGCGCAAGACCG ACGCGGTGGAGCGCACGGGCGAGGGCGCGCCGAAGGAGGGCGTGTTCACCGGCGCGTTCGCGGTGAACCCGTTCACCGGC GAGCAGGTGCCGATCTGGATCGCGAACTTCGTGCTGGCCGAGTACGGCACCGGCGCGGTGATGAGCGTCCCGGCGCACGA CCAGCGCGACTTCGAGTTCGCGCGGAAGTACGGGCTGCCGGTGCGCGTGGTCATCCAGCCGGCGCAGGGCGCGCGGCTCC CGGCCGGCGACGCGCTCGACCGGGCCGCCACCGAGGACGGCGTGCTCGAGGGCTCCGGCCCGTTCACGGGGCTCGCCTCC GCGGAGGCGCGGGCGCGCATGTCCGCGCACGCCGCCGAGAAGGGCTTCGGCCAGGGCACGGTGCGGTGGCACCTGCGCGA CTGGGGCTTCTCGCGCCAGCGCTACTGGGGCACGCCCATCCCCATCATCTACTGCGACGAGCACGGGATGGTGCCGGTGC CGGAGCAGGACCTGCCGGTGGTGCTGCCGGCCGAGGCGATCATCACCGGCACCGGCGAGCCGCCGCTCGCCAAGGTGGCG TCGTTCGTGAACACCACCTGCCCGCGCTGCGGCAAGCCGGCGCGGCGCGAGGTGGAGACCATGGACACGTTCGTGGACTC GTCCTGGTACTACGCCCGCTACCTCTCGCCGAGGGACGACGCGCGGCCGTTCGACCCGGAGGTCGCCCGGCGCTGGCTGC CGGTGGACGTGTACGTGGGCGGCCCCGAGCACGCGGTGATGCACCTGCTCTACTTCCGGTTCTGGCACCGGGTCATGCAC GAGCTCGGGCTGGTGCACGAGGACGAGCCGGTGCGGCGGCTGGTCACGCAGGGCATCGTGAACGGGCCCGACGGGCGCAA GATGTCGAAGCGCTGGGGCAACGTGGTGGCGCCGGGCGGCATGGTGTCGAGGTTCGGCGCCGACACCGTGCGCATGTTCA TGCTGTTCGCGGCGCCGCCGGAGAAGGACATCGACTGGTCCGACGAGCAGGTGGACGGCCTGTTCCGCTTCCTGGCGCGC GTGTGGCGCATCTACTTCGCGCGCCAGGCCTGCTTCGACGCGTCGGAGGCCGCGCTCGCCCAGGCGGCCGGCGAGGCGCT CGAGCTGCGGCGGCGCACCCACCGGACCATCAAGCGCGTCACCGAGGGGCTCGAGGCGGATCTCAAGTTCAACACCAGCA TCGCGGCGCTCATGGAGCTGGTGAACGCGCTCTACGCGTTCGAGCCGGCCTCCGAGCCGGACCGGGCGGCGGTGCGCGAG GCGCTGCTCGCGCTCGCGACGCTGCTGGCGCCGTTCGCGCCGCACGTGGCCGAGGAGCTGTGGCACGAGGTGATGGGGCC GGTCGCGCGCGAGCGCCTGGTGGCGGACGCGCCCTGGCCGCCGTTCGATCCGGCGCTGATCGTGGCCGACACCGTGACCA TCGCGGTCCAGGTGAACGGGAAGCTCCGCGGCGAGGTGCAGGCGCCCGCCGCGGCCGGCGAGGCGGAGGTCCGCGCGCTC GCCGAGGCCGACGAGAAGGTGAAGGTCCACCTCGCGGGCAAGACCGTCCGCAAGGTGGTCTTCGTGCCGAAGCGCCTCGT CAACTTCGTGGTGGCCTGA
Upstream 100 bases:
>100_bases TACATGCGGGACCCCGTGCTGGATGGGCGGTGGACGTGGTTTCGCGGGCAATATACCTGAGCAGACGAAACGCGCGACGT CCGCTAGAATCCGCACCCCT
Downstream 100 bases:
>100_bases CGTGCGGCGCCCGCGCGACGCCCGCAGGTCGATCGCCGTGCTGCTCGCAGGCCTGGCGGCGCTCGCCGCCGGCTGCGGCT ACGGCTTCTCCCACGCGTAC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 832; Mature: 831
Protein sequence:
>832_residues MSMNERYEPQSIEPRWQRRWEEAGAFKAGRRPDADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIG FDALGLPAENAAIKDGRHPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGKVNW CTGCQTVIANEQVVDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGLDGLKDWPDRVTTMQRNWIGKSEGAEVDFALA AGGAAVKVFTTRVDTIYGCTYVVLAPEHPLVAQVTAPERRAEVDAFVARMRKTDAVERTGEGAPKEGVFTGAFAVNPFTG EQVPIWIANFVLAEYGTGAVMSVPAHDQRDFEFARKYGLPVRVVIQPAQGARLPAGDALDRAATEDGVLEGSGPFTGLAS AEARARMSAHAAEKGFGQGTVRWHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVA SFVNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVGGPEHAVMHLLYFRFWHRVMH ELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMVSRFGADTVRMFMLFAAPPEKDIDWSDEQVDGLFRFLAR VWRIYFARQACFDASEAALAQAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAFEPASEPDRAAVRE ALLALATLLAPFAPHVAEELWHEVMGPVARERLVADAPWPPFDPALIVADTVTIAVQVNGKLRGEVQAPAAAGEAEVRAL AEADEKVKVHLAGKTVRKVVFVPKRLVNFVVA
Sequences:
>Translated_832_residues MSMNERYEPQSIEPRWQRRWEEAGAFKAGRRPDADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIG FDALGLPAENAAIKDGRHPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGKVNW CTGCQTVIANEQVVDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGLDGLKDWPDRVTTMQRNWIGKSEGAEVDFALA AGGAAVKVFTTRVDTIYGCTYVVLAPEHPLVAQVTAPERRAEVDAFVARMRKTDAVERTGEGAPKEGVFTGAFAVNPFTG EQVPIWIANFVLAEYGTGAVMSVPAHDQRDFEFARKYGLPVRVVIQPAQGARLPAGDALDRAATEDGVLEGSGPFTGLAS AEARARMSAHAAEKGFGQGTVRWHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVA SFVNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVGGPEHAVMHLLYFRFWHRVMH ELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMVSRFGADTVRMFMLFAAPPEKDIDWSDEQVDGLFRFLAR VWRIYFARQACFDASEAALAQAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAFEPASEPDRAAVRE ALLALATLLAPFAPHVAEELWHEVMGPVARERLVADAPWPPFDPALIVADTVTIAVQVNGKLRGEVQAPAAAGEAEVRAL AEADEKVKVHLAGKTVRKVVFVPKRLVNFVVA >Mature_831_residues SMNERYEPQSIEPRWQRRWEEAGAFKAGRRPDADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGF DALGLPAENAAIKDGRHPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGKVNWC TGCQTVIANEQVVDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGLDGLKDWPDRVTTMQRNWIGKSEGAEVDFALAA GGAAVKVFTTRVDTIYGCTYVVLAPEHPLVAQVTAPERRAEVDAFVARMRKTDAVERTGEGAPKEGVFTGAFAVNPFTGE QVPIWIANFVLAEYGTGAVMSVPAHDQRDFEFARKYGLPVRVVIQPAQGARLPAGDALDRAATEDGVLEGSGPFTGLASA EARARMSAHAAEKGFGQGTVRWHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVAS FVNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVGGPEHAVMHLLYFRFWHRVMHE LGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMVSRFGADTVRMFMLFAAPPEKDIDWSDEQVDGLFRFLARV WRIYFARQACFDASEAALAQAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAFEPASEPDRAAVREA LLALATLLAPFAPHVAEELWHEVMGPVARERLVADAPWPPFDPALIVADTVTIAVQVNGKLRGEVQAPAAAGEAEVRALA EADEKVKVHLAGKTVRKVVFVPKRLVNFVVA
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=878, Percent_Identity=35.5353075170843, Blast_Score=514, Evalue=1e-145, Organism=Homo sapiens, GI5454158, Length=870, Percent_Identity=23.2183908045977, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI268370293, Length=873, Percent_Identity=23.0240549828179, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI268370297, Length=873, Percent_Identity=23.0240549828179, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI94721239, Length=343, Percent_Identity=25.9475218658892, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI94721241, Length=343, Percent_Identity=25.9475218658892, Blast_Score=70, Evalue=1e-11, Organism=Escherichia coli, GI1786861, Length=873, Percent_Identity=44.2153493699885, Blast_Score=739, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=409, Percent_Identity=24.9388753056235, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71997510, Length=773, Percent_Identity=28.5899094437257, Blast_Score=313, Evalue=3e-85, Organism=Caenorhabditis elegans, GI71997517, Length=773, Percent_Identity=28.5899094437257, Blast_Score=313, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17510661, Length=868, Percent_Identity=22.5806451612903, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI212645227, Length=318, Percent_Identity=27.9874213836478, Blast_Score=123, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323414, Length=770, Percent_Identity=36.8831168831169, Blast_Score=523, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6321531, Length=438, Percent_Identity=23.5159817351598, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21355409, Length=869, Percent_Identity=32.4510932105869, Blast_Score=411, Evalue=1e-114, Organism=Drosophila melanogaster, GI17864482, Length=434, Percent_Identity=24.4239631336406, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24653289, Length=434, Percent_Identity=24.4239631336406, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355675, Length=379, Percent_Identity=26.6490765171504, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 92904; Mature: 92773
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNERYEPQSIEPRWQRRWEEAGAFKAGRRPDADTRYVLEMFPYPSGAMHMGHARVYTI CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEEEH GDALARHLRMRGFDVLHPIGFDALGLPAENAAIKDGRHPAERTRENVVSFRAEMKRLGYS HHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGKVNWCTGCQTVIANEQVVDDNRCE CCCCHHHEECCCCCEECCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCHHHH RCGSPVVEKIHPEWAFRITAYAQQLLDGLDGLKDWPDRVTTMQRNWIGKSEGAEVDFALA HCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE AGGAAVKVFTTRVDTIYGCTYVVLAPEHPLVAQVTAPERRAEVDAFVARMRKTDAVERTG CCCCEEEEEEEHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC EGAPKEGVFTGAFAVNPFTGEQVPIWIANFVLAEYGTGAVMSVPAHDQRDFEFARKYGLP CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCC VRVVIQPAQGARLPAGDALDRAATEDGVLEGSGPFTGLASAEARARMSAHAAEKGFGQGT EEEEEECCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCE VRWHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVA EEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCHHHHHH SFVNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVG HHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEC GPEHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCEECCCC MVSRFGADTVRMFMLFAAPPEKDIDWSDEQVDGLFRFLARVWRIYFARQACFDASEAALA HHHHHCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAFEPASEPDRAAVRE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ALLALATLLAPFAPHVAEELWHEVMGPVARERLVADAPWPPFDPALIVADTVTIAVQVNG HHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECC KLRGEVQAPAAAGEAEVRALAEADEKVKVHLAGKTVRKVVFVPKRLVNFVVA CEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SMNERYEPQSIEPRWQRRWEEAGAFKAGRRPDADTRYVLEMFPYPSGAMHMGHARVYTI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEEEH GDALARHLRMRGFDVLHPIGFDALGLPAENAAIKDGRHPAERTRENVVSFRAEMKRLGYS HHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGKVNWCTGCQTVIANEQVVDDNRCE CCCCHHHEECCCCCEECCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCHHHH RCGSPVVEKIHPEWAFRITAYAQQLLDGLDGLKDWPDRVTTMQRNWIGKSEGAEVDFALA HCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE AGGAAVKVFTTRVDTIYGCTYVVLAPEHPLVAQVTAPERRAEVDAFVARMRKTDAVERTG CCCCEEEEEEEHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC EGAPKEGVFTGAFAVNPFTGEQVPIWIANFVLAEYGTGAVMSVPAHDQRDFEFARKYGLP CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCC VRVVIQPAQGARLPAGDALDRAATEDGVLEGSGPFTGLASAEARARMSAHAAEKGFGQGT EEEEEECCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCE VRWHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVA EEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCHHHHHH SFVNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVG HHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEC GPEHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCEECCCC MVSRFGADTVRMFMLFAAPPEKDIDWSDEQVDGLFRFLARVWRIYFARQACFDASEAALA HHHHHCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAFEPASEPDRAAVRE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ALLALATLLAPFAPHVAEELWHEVMGPVARERLVADAPWPPFDPALIVADTVTIAVQVNG HHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECC KLRGEVQAPAAAGEAEVRALAEADEKVKVHLAGKTVRKVVFVPKRLVNFVVA CEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA