Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918009
Identifier: 220918009
GI number: 220918009
Start: 3222612
End: 3223148
Strand: Reverse
Name: 220918009
Synonym: A2cp1_2910
Alternate gene names: NA
Gene position: 3223148-3222612 (Counterclockwise)
Preceding gene: 220918010
Following gene: 220918006
Centisome position: 64.09
GC content: 79.7
Gene sequence:
>537_bases GTGCGGCGCCCGCGCGACGCCCGCAGGTCGATCGCCGTGCTGCTCGCAGGCCTGGCGGCGCTCGCCGCCGGCTGCGGCTA CGGCTTCTCCCACGCGTACCGCGCGCGCGGCGGCGCGGAGCGCGTGCACGTGCGCGCGTTCCAGAACCTCTCGAGCGATC CGGAGCTGGGCGCCGCCCTCACCGCCGCGCTGCGCGAGGAGCTGGCGCGGCGCGGGGCGTCGGCCGGCCCGGACGCGCCG GTGGCGATCGAGGGCGAGGTGGGCGCCGGGGAGGGCCTGCCGTCGTCGGTGACCGGCTCGACCTTCCACGTGGTGCTGAA CGCGCGCGCGCGCCTGGTGTCCGAGGGGAAGGTGATCGCCTCGCTCGCCGTCCGCCGCGACGGCGATCACCTGGGCGGCG CGGATCCGCTCGAGACCGAGGGCCGGCGCGCGCTCGAGCTGCGCCGGCTGGCGGCGGACGCGGCGCGCCAGATCCTCGAG GGGTTCGAGGACCGGGACGAGCGCGCCCCGGCCGCGCAGGGCGCGGCGGGGCGCTGA
Upstream 100 bases:
>100_bases GCCGAGGCCGACGAGAAGGTGAAGGTCCACCTCGCGGGCAAGACCGTCCGCAAGGTGGTCTTCGTGCCGAAGCGCCTCGT CAACTTCGTGGTGGCCTGAC
Downstream 100 bases:
>100_bases CGACCGGGGCGGGGAGGGAGCCTACTTCGCGGCGGCGGCCGGCTTCGCCGCGGCCTTCGCCAGGCGGGAGATCTTCCGCG AGGCGGCGTTCTTGTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRRPRDARRSIAVLLAGLAALAAGCGYGFSHAYRARGGAERVHVRAFQNLSSDPELGAALTAALREELARRGASAGPDAP VAIEGEVGAGEGLPSSVTGSTFHVVLNARARLVSEGKVIASLAVRRDGDHLGGADPLETEGRRALELRRLAADAARQILE GFEDRDERAPAAQGAAGR
Sequences:
>Translated_178_residues MRRPRDARRSIAVLLAGLAALAAGCGYGFSHAYRARGGAERVHVRAFQNLSSDPELGAALTAALREELARRGASAGPDAP VAIEGEVGAGEGLPSSVTGSTFHVVLNARARLVSEGKVIASLAVRRDGDHLGGADPLETEGRRALELRRLAADAARQILE GFEDRDERAPAAQGAAGR >Mature_178_residues MRRPRDARRSIAVLLAGLAALAAGCGYGFSHAYRARGGAERVHVRAFQNLSSDPELGAALTAALREELARRGASAGPDAP VAIEGEVGAGEGLPSSVTGSTFHVVLNARARLVSEGKVIASLAVRRDGDHLGGADPLETEGRRALELRRLAADAARQILE GFEDRDERAPAAQGAAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18511; Mature: 18511
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPRDARRSIAVLLAGLAALAAGCGYGFSHAYRARGGAERVHVRAFQNLSSDPELGAAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH TAALREELARRGASAGPDAPVAIEGEVGAGEGLPSSVTGSTFHVVLNARARLVSEGKVIA HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHH SLAVRRDGDHLGGADPLETEGRRALELRRLAADAARQILEGFEDRDERAPAAQGAAGR HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRRPRDARRSIAVLLAGLAALAAGCGYGFSHAYRARGGAERVHVRAFQNLSSDPELGAAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH TAALREELARRGASAGPDAPVAIEGEVGAGEGLPSSVTGSTFHVVLNARARLVSEGKVIA HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHH SLAVRRDGDHLGGADPLETEGRRALELRRLAADAARQILEGFEDRDERAPAAQGAAGR HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA