Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917981
Identifier: 220917981
GI number: 220917981
Start: 3182922
End: 3184520
Strand: Reverse
Name: 220917981
Synonym: A2cp1_2882
Alternate gene names: NA
Gene position: 3184520-3182922 (Counterclockwise)
Preceding gene: 220917982
Following gene: 220917980
Centisome position: 63.32
GC content: 78.61
Gene sequence:
>1599_bases GTGGATCGACTCCGCCCCGCCCACCGCCGTCCCCGCGGCTCCCGCCGCGGGCTGACCCGCGCCGCCGCGCTGGCGCTCGC GCTCGCCGCCGCCGGCTGCCCCGCGAAGCAGGAGCCGGGCGCCGCCGCCGGGAGCGCCGCGGGGCGCGCCGTGCTGCGCG GTCCGGTGCGCGCCGTGAAGGCGTCGGCGGACGGCGCCTGGCTGGCGGTGCTCGAGGGCTGCAACGAGGCGCGCGGGCAG TTCCTGCCGCCACGCACCGCGAGCTGCGACGTGCGGCTCGTGCCGAGCGCGGGCGGTGACGCGCGCCGGGTGGCCGGGGC GGTCACCACGCTCCCGCACGGCCTGCTCTGGAGCCCGGCGGGCGCCACGCTCGCGGCGCTGGGCGAGTACGACTACCCGA CCGCGCGGGGCACGCTGGTGGTGGTGCGGGCGGGCGGCGCGCCGCGAACGCTCGGGACGGCGGTGTCGTTCGCGGGCTTC GCGCCCGGGACCGAGGACCTGCTGTTCGTCGCCGACGGCCGGCTGCTCGTGTCGCGCGGCGGCGGCGAGCCCGAGCCGGT GGCGGGCCTGGACCGGGTGGGCTCGCTCGAGCCGGGGCCGGGCTGGTCCGGCGGAGAGGGGCCCGCCCTGCTGGTGCGCC AGGGCGCGTCGGCGGGCGCGGCGCTGTCGGTGGTCGGGGCCGACGGGCGGGCCCGCCGCGTGGCGGAGCGGAGCGGCGAC TACGCGATCGCGCCGGGCGGCGCGTACGCGTACACCGTGCAGGACGGGGGCGGCTACGCGCTCCACCTGGCCGGACCGCG CCAGGCGGTGCTCGGCAAGGAGGTGCAGGCGTTCGCGTTCTCGCGCGACGGCCGCGCCCTCGCGTTCCTGGCGGACGCGA CCCCCGGGAAGCAGGGCGACCTGCACCTGGCGCTGGTGGCGAAGCCCGGCGACGCGGTGCTCGCGCGCGAGGTGGGCGAG CTGTGCTGGGCGCAGCGGGCGCCGCGGCTCGCCTGGCTGGAGCGGTTCGACGCCCGGGTCCGCTCCGGCACCGCCGGCGC AGGCGGGCTCGACCTGCCGTCGCGCACCTACGGCGCGAACGTGACCGACCTCGAGCTCTCCGCCGACGGCAAGCGCCTCG CGTTCCTTCAGCACACCACGCGCGGCGGCTACTCGGTGGACCTGATGCTGGCGCAGCTCGATGCGCCGCCCGGTACGGCC GCCGTCCAGGTGGCGCAGGGCGCGTTCGGGTTCTCCTTCTCGCCGGACGCGCGGTGGCTCTACTACCGGACCCGCTGCGT CCGGAACGGCGAGGGCTGCGACGTCGAGCGCGTGCCGGCCGAGGGGCTCGCCCCCGGCGCGAAGCCGGAGCGGGTGGCGG ACGGAGCCAAGAGCTTCGAGTACGACCCGCGCGATCCCGGGCGGCTGCTCGTCACCTGGCAGCGCATGGACCGCGACGCG CTCGACGTCGGGGTCTGGAAGGACGGCAAGCTGACGCGGGTCGACACCTACGTGCTGCCCGGCTCCGCCCAGCTCCTCGG CCCGGACTCGCGCCGCCTCGTCTACGCCGTGCTCCACGAGAAGCGCCAGGGCGCCTACGTGGCCGAGCTGCCGCGCTAG
Upstream 100 bases:
>100_bases ACGTGGTCTTCGCGCTGTTCCCTCCGCTCACCGGGCGCCACCGCGGCAAGGCCGGCCGCAAGGAGGCCCACGTGGAGCGG GCGCGCAAGGAGCTGGCACC
Downstream 100 bases:
>100_bases CGCGGGGCCGGCGGCGCCAGGAACTGTCGCCCGGGCCGGCGCGGTGGTACGCGATCCCCGATGACGCCCGACGCGTCCGC GCTGCCGCCCGAGGTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MDRLRPAHRRPRGSRRGLTRAAALALALAAAGCPAKQEPGAAAGSAAGRAVLRGPVRAVKASADGAWLAVLEGCNEARGQ FLPPRTASCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPAGATLAALGEYDYPTARGTLVVVRAGGAPRTLGTAVSFAGF APGTEDLLFVADGRLLVSRGGGEPEPVAGLDRVGSLEPGPGWSGGEGPALLVRQGASAGAALSVVGADGRARRVAERSGD YAIAPGGAYAYTVQDGGGYALHLAGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGDLHLALVAKPGDAVLAREVGE LCWAQRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYGANVTDLELSADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTA AVQVAQGAFGFSFSPDARWLYYRTRCVRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPRDPGRLLVTWQRMDRDA LDVGVWKDGKLTRVDTYVLPGSAQLLGPDSRRLVYAVLHEKRQGAYVAELPR
Sequences:
>Translated_532_residues MDRLRPAHRRPRGSRRGLTRAAALALALAAAGCPAKQEPGAAAGSAAGRAVLRGPVRAVKASADGAWLAVLEGCNEARGQ FLPPRTASCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPAGATLAALGEYDYPTARGTLVVVRAGGAPRTLGTAVSFAGF APGTEDLLFVADGRLLVSRGGGEPEPVAGLDRVGSLEPGPGWSGGEGPALLVRQGASAGAALSVVGADGRARRVAERSGD YAIAPGGAYAYTVQDGGGYALHLAGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGDLHLALVAKPGDAVLAREVGE LCWAQRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYGANVTDLELSADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTA AVQVAQGAFGFSFSPDARWLYYRTRCVRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPRDPGRLLVTWQRMDRDA LDVGVWKDGKLTRVDTYVLPGSAQLLGPDSRRLVYAVLHEKRQGAYVAELPR >Mature_532_residues MDRLRPAHRRPRGSRRGLTRAAALALALAAAGCPAKQEPGAAAGSAAGRAVLRGPVRAVKASADGAWLAVLEGCNEARGQ FLPPRTASCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPAGATLAALGEYDYPTARGTLVVVRAGGAPRTLGTAVSFAGF APGTEDLLFVADGRLLVSRGGGEPEPVAGLDRVGSLEPGPGWSGGEGPALLVRQGASAGAALSVVGADGRARRVAERSGD YAIAPGGAYAYTVQDGGGYALHLAGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGDLHLALVAKPGDAVLAREVGE LCWAQRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYGANVTDLELSADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTA AVQVAQGAFGFSFSPDARWLYYRTRCVRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPRDPGRLLVTWQRMDRDA LDVGVWKDGKLTRVDTYVLPGSAQLLGPDSRRLVYAVLHEKRQGAYVAELPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55356; Mature: 55356
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLRPAHRRPRGSRRGLTRAAALALALAAAGCPAKQEPGAAAGSAAGRAVLRGPVRAVK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHCCHHEEE ASADGAWLAVLEGCNEARGQFLPPRTASCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPA ECCCCEEEEEECCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCC GATLAALGEYDYPTARGTLVVVRAGGAPRTLGTAVSFAGFAPGTEDLLFVADGRLLVSRG CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEECC GGEPEPVAGLDRVGSLEPGPGWSGGEGPALLVRQGASAGAALSVVGADGRARRVAERSGD CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHCCC YAIAPGGAYAYTVQDGGGYALHLAGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGD EEEECCCEEEEEEECCCCEEEEECCCCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCC LHLALVAKPGDAVLAREVGELCWAQRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYGAN EEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTDLELSADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTAAVQVAQGAFGFSFSPDARWL CEEEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEE YYRTRCVRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPRDPGRLLVTWQRMDRDA EEEEEEECCCCCCCEECCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEEEECCCCCC LDVGVWKDGKLTRVDTYVLPGSAQLLGPDSRRLVYAVLHEKRQGAYVAELPR EEECCCCCCCEEEEEEEEECCCCEEECCCCCCEEEEEHHHHCCCCEEECCCC >Mature Secondary Structure MDRLRPAHRRPRGSRRGLTRAAALALALAAAGCPAKQEPGAAAGSAAGRAVLRGPVRAVK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHCCHHEEE ASADGAWLAVLEGCNEARGQFLPPRTASCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPA ECCCCEEEEEECCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCC GATLAALGEYDYPTARGTLVVVRAGGAPRTLGTAVSFAGFAPGTEDLLFVADGRLLVSRG CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEECC GGEPEPVAGLDRVGSLEPGPGWSGGEGPALLVRQGASAGAALSVVGADGRARRVAERSGD CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHCCC YAIAPGGAYAYTVQDGGGYALHLAGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGD EEEECCCEEEEEEECCCCEEEEECCCCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCC LHLALVAKPGDAVLAREVGELCWAQRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYGAN EEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTDLELSADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTAAVQVAQGAFGFSFSPDARWL CEEEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEE YYRTRCVRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPRDPGRLLVTWQRMDRDA EEEEEEECCCCCCCEECCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEEEECCCCCC LDVGVWKDGKLTRVDTYVLPGSAQLLGPDSRRLVYAVLHEKRQGAYVAELPR EEECCCCCCCEEEEEEEEECCCCEEECCCCCCEEEEEHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA