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The map label for this gene is ybjY [C]

Identifier: 220917942

GI number: 220917942

Start: 3142568

End: 3143749

Strand: Direct

Name: ybjY [C]

Synonym: A2cp1_2843

Alternate gene names: 220917942

Gene position: 3142568-3143749 (Clockwise)

Preceding gene: 220917941

Following gene: 220917952

Centisome position: 62.48

GC content: 81.39

Gene sequence:

>1182_bases
ATGCGGCGCTGGATGGTGCTCGGAGCGATGGTGGCGCTCGCGCTGGCGGGCGCGGCGGCGGTCCTCGGCAGGGGTGCGGC
CGAGGTGGAGGTCCGGCGCGCGACCCGCGGCCCCATCGCCGAGTGGGTGGAGGGCACCGGGAAGGCGCGGGTGCGAGAGC
GGCATGCCGTCTCCGCCCCGGTGACCGGCGCGCTCGAGCGAGTCGAGGTCCACGCCGGGGACACGGTGCGCGCCGGCGCG
GTGGTGGCCCGGGTGCTCCCGCTCACGCCGACGCCGCTCGACCCGCGCGCGCGCTCCGAGGCCCGGGCGCGCGCGGCGGC
GGCGACGGCCGCCGAGGCGCAGGCGGAGGCGGCGCTGCGAAGGGCCCGGGTGGTGGAGGCCGACGCGGCGCGGACCCTGG
CGCGGGCCCGCGCCCTCCTCGCCGCCTCGGCCATGGCGGCGAGCGAGCACGACGCCGCGGAGGCCACTGCGCGCGCTGCG
CGCGAGGAGGTGGACGCCGCGCAGGCCACGGTCGGGCGGGTGCGGGCGGAGCGCATCGCGGCCGAGGCCGTGCTCGCCGC
GCCCCGCGGCGCGGCCGGCGGCGCCGTCCCGGTCGCCTCGCCGGTGGCCGGCGTGGTGCTGCGCGTCGCGCAGGAGAGCC
CGGGTCCCGTGCTCGCCGGCACGCCCGTGCTCGAGCTGGGCGACCCGCGCGATCTCGAGGTCGCGCTCGAGCTCCTCACC
GAGCAGGCCTCGCGGGTGCGCCCCGGCGCGGAGGTGGAGCTGACGGCCTGGGGCGGCGACGCGCCGCTCGCGGGCCGGGT
CCGCCGCGTCGAGCCGAGCGCGTTCACGAAGGTGAGCGCGCTCGGCGTCGAGGAGCAGCGCGTGAACGTGCTGGTCGATC
CGGCCGGCGCGGCGGGCGCGTGGGCGCCGCTCGGCGACGGCTGGCGCGTCGAGGGCCGCGTGGAGGTGGCGCGCCGGCCG
GACGCGCTGCTCGTGCCCGCGAGCAGCGTGTTCCGGGGCGACCGCGGCTGGGCGGTGTACGCGGTCGAGGGCGGGCGGGC
GCGGCTGTGCCCGGTCCGGCTGGGCGCGATGGCCGCCACCGAGGTGGAGATCGCCGAGGGGCTCGCAGAGGGAGCGCCGG
TGGTGCTCCGGCCCACCGGCGCGCTCCGCGACGGCGTGCGGGTGCGGGCGCGGGAGCCGTGA

Upstream 100 bases:

>100_bases
GGGCGTGGTCTGCGCCGCGAGCGGGCTGCTCGTGGCGCTGGCGCGGCGCTGGGTCGGGAAGGTGGATCTGGTGGAGGTGC
TGAAGGCGCGGGAGTGAGCG

Downstream 100 bases:

>100_bases
GCCGGCGGCCTATGCGGGGGCGTTCGCCCCGTCGTCCGGGGTCCCGGTCACGCCCAGGTAGCGCAGCAGGCGCCGGTGGT
GCTGGCGCAGGCCGCGCACC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MRRWMVLGAMVALALAGAAAVLGRGAAEVEVRRATRGPIAEWVEGTGKARVRERHAVSAPVTGALERVEVHAGDTVRAGA
VVARVLPLTPTPLDPRARSEARARAAAATAAEAQAEAALRRARVVEADAARTLARARALLAASAMAASEHDAAEATARAA
REEVDAAQATVGRVRAERIAAEAVLAAPRGAAGGAVPVASPVAGVVLRVAQESPGPVLAGTPVLELGDPRDLEVALELLT
EQASRVRPGAEVELTAWGGDAPLAGRVRRVEPSAFTKVSALGVEEQRVNVLVDPAGAAGAWAPLGDGWRVEGRVEVARRP
DALLVPASSVFRGDRGWAVYAVEGGRARLCPVRLGAMAATEVEIAEGLAEGAPVVLRPTGALRDGVRVRAREP

Sequences:

>Translated_393_residues
MRRWMVLGAMVALALAGAAAVLGRGAAEVEVRRATRGPIAEWVEGTGKARVRERHAVSAPVTGALERVEVHAGDTVRAGA
VVARVLPLTPTPLDPRARSEARARAAAATAAEAQAEAALRRARVVEADAARTLARARALLAASAMAASEHDAAEATARAA
REEVDAAQATVGRVRAERIAAEAVLAAPRGAAGGAVPVASPVAGVVLRVAQESPGPVLAGTPVLELGDPRDLEVALELLT
EQASRVRPGAEVELTAWGGDAPLAGRVRRVEPSAFTKVSALGVEEQRVNVLVDPAGAAGAWAPLGDGWRVEGRVEVARRP
DALLVPASSVFRGDRGWAVYAVEGGRARLCPVRLGAMAATEVEIAEGLAEGAPVVLRPTGALRDGVRVRAREP
>Mature_393_residues
MRRWMVLGAMVALALAGAAAVLGRGAAEVEVRRATRGPIAEWVEGTGKARVRERHAVSAPVTGALERVEVHAGDTVRAGA
VVARVLPLTPTPLDPRARSEARARAAAATAAEAQAEAALRRARVVEADAARTLARARALLAASAMAASEHDAAEATARAA
REEVDAAQATVGRVRAERIAAEAVLAAPRGAAGGAVPVASPVAGVVLRVAQESPGPVLAGTPVLELGDPRDLEVALELLT
EQASRVRPGAEVELTAWGGDAPLAGRVRRVEPSAFTKVSALGVEEQRVNVLVDPAGAAGAWAPLGDGWRVEGRVEVARRP
DALLVPASSVFRGDRGWAVYAVEGGRARLCPVRLGAMAATEVEIAEGLAEGAPVVLRPTGALRDGVRVRAREP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40456; Mature: 40456

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWMVLGAMVALALAGAAAVLGRGAAEVEVRRATRGPIAEWVEGTGKARVRERHAVSAP
CCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCCCHHHHHCCCCCHHHHHHHCCCCC
VTGALERVEVHAGDTVRAGAVVARVLPLTPTPLDPRARSEARARAAAATAAEAQAEAALR
CHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RARVVEADAARTLARARALLAASAMAASEHDAAEATARAAREEVDAAQATVGRVRAERIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAVLAAPRGAAGGAVPVASPVAGVVLRVAQESPGPVLAGTPVLELGDPRDLEVALELLT
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCHHHHHHHHHH
EQASRVRPGAEVELTAWGGDAPLAGRVRRVEPSAFTKVSALGVEEQRVNVLVDPAGAAGA
HHHHHCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
WAPLGDGWRVEGRVEVARRPDALLVPASSVFRGDRGWAVYAVEGGRARLCPVRLGAMAAT
CCCCCCCEEECCEEEECCCCCEEEECCHHHHCCCCCEEEEEEECCCEEECCEECCCHHHH
EVEIAEGLAEGAPVVLRPTGALRDGVRVRAREP
HHHHHHHHHCCCCEEEECCCCCCCCCEEEECCC
>Mature Secondary Structure
MRRWMVLGAMVALALAGAAAVLGRGAAEVEVRRATRGPIAEWVEGTGKARVRERHAVSAP
CCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCCCHHHHHCCCCCHHHHHHHCCCCC
VTGALERVEVHAGDTVRAGAVVARVLPLTPTPLDPRARSEARARAAAATAAEAQAEAALR
CHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RARVVEADAARTLARARALLAASAMAASEHDAAEATARAAREEVDAAQATVGRVRAERIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAVLAAPRGAAGGAVPVASPVAGVVLRVAQESPGPVLAGTPVLELGDPRDLEVALELLT
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCHHHHHHHHHH
EQASRVRPGAEVELTAWGGDAPLAGRVRRVEPSAFTKVSALGVEEQRVNVLVDPAGAAGA
HHHHHCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
WAPLGDGWRVEGRVEVARRPDALLVPASSVFRGDRGWAVYAVEGGRARLCPVRLGAMAAT
CCCCCCCEEECCEEEECCCCCEEEECCHHHHCCCCCEEEEEEECCCEEECCEECCCHHHH
EVEIAEGLAEGAPVVLRPTGALRDGVRVRAREP
HHHHHHHHHCCCCEEEECCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA