Click here to switch to the map view.

The map label for this gene is 220917941

Identifier: 220917941

GI number: 220917941

Start: 3140204

End: 3142564

Strand: Direct

Name: 220917941

Synonym: A2cp1_2842

Alternate gene names: NA

Gene position: 3140204-3142564 (Clockwise)

Preceding gene: 220917940

Following gene: 220917942

Centisome position: 62.44

GC content: 78.53

Gene sequence:

>2361_bases
GTGAGCGCGCTCGACCACAAGGCCTGGCACGACCTCGGGCGCATGCGCGGCCAGGCGGTGGCGGTGGGCGCGCTGATCGC
GAGCGCCATGGCGGTGTGGGTGACCACGGTGCTCACCGAGCGCGCCATGCTGCGGACCCGCGACGCGTACTACGCGCGCC
AGCGGTTCGCCGACGCGTTCGCCTCGGTGCGGCGCGCGCCCGAGCCGGTGGGCGCGCGCCTCGCCGCCGTCGCCGGCGTG
GCCGAGGTGGAGACGCGGGTGATCTGGCCCGGTCGCCTGGACCTGCCCGACGCGCGCCGGGCGCGGGCGACGTTCGTGTC
CCTGCCCGACCGCGCGGCGCCGCGGCTCAACGTGCTCGCGCTGCGGGCCGGTCGCCTCCCGCTGCCCGGCGAGCGCGGCG
TGGCGGTCCTCACCGAGGGCTTCGCCGTCGCGAACCGGCTCGGCCCCGGCGACGACCTCGCTGCGGTGCTGAACGGCCGC
CGCACGCGGCTGCGCGTCGTCGGCGTGGCGCTCTCGCCCGAGTACGTCTACGCCGTCGGGCCCGGCATGCTGTTCCCGGA
CGACCGGAGCTTCGGGGTGGTCTGGGCGCCGCGCACCGACCTGGCGGAGGCGGCGGGGCTGGACGGCGCGTTCAACGCGG
TGGCGCTGCGCCTCGGCCCGGGCGCGGCCGAGCCGGACGTCCTCGCCGCGGTGGACCGGGTGCTCGAGCCCTGGGGCGGC
GTCGGCGCCCACGCCCGCCGGGACCAGGCCTCGCACCGCTACCTCTCCGACGAGCTGACGCAGCTCCGGGCGCTGGCGCT
GGTGATGCCCGCCATCTTCCTCGGCGTCGCCGCGTTCCTGCTGTCCGTGATCGTGTCGCGGCTCGTGGCGCAGCAGCGGC
CGCAGGTGGGCATGCTGAAGGCGCTGGGCTACTCCGACCTCGCGCTGGCGATCCACTACGCGAAGCTGGTGGGCGTGGTG
GTGGCGGCCGGCGCCGCCGCGGGCGCGGCCGGCGGCGCGCTGCTCGGCCGCGGGCTCGCCCGCATGTACGCGGAGTTCTA
CCGGTTCCCGTTCCTCGTCTACGCCGATGCCCCGGCGGTGGTCGCCTCCGGCGCGGCCCTGTGCGCGCTCGCGGCGCTGG
TGGGCGTGGCCGCCGCGGTGGCCCGCGCCGCCCGGCTCCCGCCCGCCGAGGCGATGCGCCCCGAGCCGCCGCCCGCGTTC
CGCGCCACGCGCCTCGACCGCCTGCTGGCCCAGCCCGGCGTCCCGCCCGCCTGGCGGATGGTGCTGCGCAACCTGTCCCG
CCGTCCGGTGCGGGCCGGCCTGTCCGCGCTCGGCGTGGCCTGCGGGATCGCGGTGATCGTCCTCGCCGGCGCCATGCAGG
ACGCGCTCCATCACCTGCTCGGCGTCCAGTTCCGGGAGGCGCGCCGCGAGGACGCGATCGTGGTGTTCACCGAGGCGGTC
GGCGCCGACGCGCTGGCGGAGCTGCGCGCCCTGCCCGGCGTGCGCGCGGCGGAGCCGTTCCGCGGCGTGCCCGCGACGCT
GCGGAGCGGGCCGCGCAGCCACCGGACGGAGATCGCCGGCCTCGACCCCGGCGCGCGCCTGTGGCGCCTGGTGGACGCGA
GCGGGCGCGAGGTGCCGGTGCCGCCGGCCGGCGTGGTGCTCTCGTCGCAGCTCGCGCGCATGCTCGCCGTCGGCCCGGGC
GACACGGTGCTCGCCGAGGTCCACGAGGGGCGGCGCCCGGTGCTGGCGCTGCCGGTGGCCGCGCTGGTGGACGACTTCGT
GGGCGTGAGCGCGACGCTGAGCCGGGCGCGCCTCGACGCCGCCCTCGGCGACGGCCCGCGCGCCAGCGGCGCGCTGCTCG
CGCTCGCGACCGGCGCGGGCCCGCAGGTGGAGGCTCGGCTGGCGGAGCGGCCCCGGGTGGCGGCGGTCACGCTCGGGGAC
GAGCTGCGGCGCTCGATGGAGACGGTGATCGGGCGCTTCATGGGCGGCGTGGTCGCGGTGCTGGCCGGGTTCGCGCTCGT
GCTCGCCGGCGGCGTCATCTACAACGCGGCCCGGGTCGCGCACGCCGAGCGGCAGCGCGAGCTCGCCACGCTGCAGGTGC
TCGGGTTCACGCCGGGCGAGGCGTGGCGCATCCTGGCCGGCGAGCTGGCGGTGCTGGTCCTCCTGGCCATCCCGGCCGGC
TGCGCCCTCGGGCTCGGGCTGGCCACGCTCACCTCGCGGCTGGTGTCGTCCGACCTGTTCCGGCTGCCGGTGGTCATCTC
GCCCGGCACGTGGGCGCGGGCGGTGGGCGTGGTCTGCGCCGCGAGCGGGCTGCTCGTGGCGCTGGCGCGGCGCTGGGTCG
GGAAGGTGGATCTGGTGGAGGTGCTGAAGGCGCGGGAGTGA

Upstream 100 bases:

>100_bases
CCATCGCCGCGCTGGCAGACCGGGTGGTGCACGTGCGCGACGGCCGCATCGCGCGCGTCGACCACAACGCGCGGCGCGCG
CCGGCCGCGGAGATCGCCTG

Downstream 100 bases:

>100_bases
GCGATGCGGCGCTGGATGGTGCTCGGAGCGATGGTGGCGCTCGCGCTGGCGGGCGCGGCGGCGGTCCTCGGCAGGGGTGC
GGCCGAGGTGGAGGTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Efflux ABC Transporter Permease Protein; Permease; ABC Transporter Inner Membrane Subunit; Permease Domain-Containing Protein; Peptide ABC Transporter Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 786; Mature: 785

Protein sequence:

>786_residues
MSALDHKAWHDLGRMRGQAVAVGALIASAMAVWVTTVLTERAMLRTRDAYYARQRFADAFASVRRAPEPVGARLAAVAGV
AEVETRVIWPGRLDLPDARRARATFVSLPDRAAPRLNVLALRAGRLPLPGERGVAVLTEGFAVANRLGPGDDLAAVLNGR
RTRLRVVGVALSPEYVYAVGPGMLFPDDRSFGVVWAPRTDLAEAAGLDGAFNAVALRLGPGAAEPDVLAAVDRVLEPWGG
VGAHARRDQASHRYLSDELTQLRALALVMPAIFLGVAAFLLSVIVSRLVAQQRPQVGMLKALGYSDLALAIHYAKLVGVV
VAAGAAAGAAGGALLGRGLARMYAEFYRFPFLVYADAPAVVASGAALCALAALVGVAAAVARAARLPPAEAMRPEPPPAF
RATRLDRLLAQPGVPPAWRMVLRNLSRRPVRAGLSALGVACGIAVIVLAGAMQDALHHLLGVQFREARREDAIVVFTEAV
GADALAELRALPGVRAAEPFRGVPATLRSGPRSHRTEIAGLDPGARLWRLVDASGREVPVPPAGVVLSSQLARMLAVGPG
DTVLAEVHEGRRPVLALPVAALVDDFVGVSATLSRARLDAALGDGPRASGALLALATGAGPQVEARLAERPRVAAVTLGD
ELRRSMETVIGRFMGGVVAVLAGFALVLAGGVIYNAARVAHAERQRELATLQVLGFTPGEAWRILAGELAVLVLLAIPAG
CALGLGLATLTSRLVSSDLFRLPVVISPGTWARAVGVVCAASGLLVALARRWVGKVDLVEVLKARE

Sequences:

>Translated_786_residues
MSALDHKAWHDLGRMRGQAVAVGALIASAMAVWVTTVLTERAMLRTRDAYYARQRFADAFASVRRAPEPVGARLAAVAGV
AEVETRVIWPGRLDLPDARRARATFVSLPDRAAPRLNVLALRAGRLPLPGERGVAVLTEGFAVANRLGPGDDLAAVLNGR
RTRLRVVGVALSPEYVYAVGPGMLFPDDRSFGVVWAPRTDLAEAAGLDGAFNAVALRLGPGAAEPDVLAAVDRVLEPWGG
VGAHARRDQASHRYLSDELTQLRALALVMPAIFLGVAAFLLSVIVSRLVAQQRPQVGMLKALGYSDLALAIHYAKLVGVV
VAAGAAAGAAGGALLGRGLARMYAEFYRFPFLVYADAPAVVASGAALCALAALVGVAAAVARAARLPPAEAMRPEPPPAF
RATRLDRLLAQPGVPPAWRMVLRNLSRRPVRAGLSALGVACGIAVIVLAGAMQDALHHLLGVQFREARREDAIVVFTEAV
GADALAELRALPGVRAAEPFRGVPATLRSGPRSHRTEIAGLDPGARLWRLVDASGREVPVPPAGVVLSSQLARMLAVGPG
DTVLAEVHEGRRPVLALPVAALVDDFVGVSATLSRARLDAALGDGPRASGALLALATGAGPQVEARLAERPRVAAVTLGD
ELRRSMETVIGRFMGGVVAVLAGFALVLAGGVIYNAARVAHAERQRELATLQVLGFTPGEAWRILAGELAVLVLLAIPAG
CALGLGLATLTSRLVSSDLFRLPVVISPGTWARAVGVVCAASGLLVALARRWVGKVDLVEVLKARE
>Mature_785_residues
SALDHKAWHDLGRMRGQAVAVGALIASAMAVWVTTVLTERAMLRTRDAYYARQRFADAFASVRRAPEPVGARLAAVAGVA
EVETRVIWPGRLDLPDARRARATFVSLPDRAAPRLNVLALRAGRLPLPGERGVAVLTEGFAVANRLGPGDDLAAVLNGRR
TRLRVVGVALSPEYVYAVGPGMLFPDDRSFGVVWAPRTDLAEAAGLDGAFNAVALRLGPGAAEPDVLAAVDRVLEPWGGV
GAHARRDQASHRYLSDELTQLRALALVMPAIFLGVAAFLLSVIVSRLVAQQRPQVGMLKALGYSDLALAIHYAKLVGVVV
AAGAAAGAAGGALLGRGLARMYAEFYRFPFLVYADAPAVVASGAALCALAALVGVAAAVARAARLPPAEAMRPEPPPAFR
ATRLDRLLAQPGVPPAWRMVLRNLSRRPVRAGLSALGVACGIAVIVLAGAMQDALHHLLGVQFREARREDAIVVFTEAVG
ADALAELRALPGVRAAEPFRGVPATLRSGPRSHRTEIAGLDPGARLWRLVDASGREVPVPPAGVVLSSQLARMLAVGPGD
TVLAEVHEGRRPVLALPVAALVDDFVGVSATLSRARLDAALGDGPRASGALLALATGAGPQVEARLAERPRVAAVTLGDE
LRRSMETVIGRFMGGVVAVLAGFALVLAGGVIYNAARVAHAERQRELATLQVLGFTPGEAWRILAGELAVLVLLAIPAGC
ALGLGLATLTSRLVSSDLFRLPVVISPGTWARAVGVVCAASGLLVALARRWVGKVDLVEVLKARE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82093; Mature: 81962

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALDHKAWHDLGRMRGQAVAVGALIASAMAVWVTTVLTERAMLRTRDAYYARQRFADAF
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVRRAPEPVGARLAAVAGVAEVETRVIWPGRLDLPDARRARATFVSLPDRAAPRLNVLA
HHHHCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHEEECCCCCCCCCEEEE
LRAGRLPLPGERGVAVLTEGFAVANRLGPGDDLAAVLNGRRTRLRVVGVALSPEYVYAVG
EECCCCCCCCCCCCEEEECCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEC
PGMLFPDDRSFGVVWAPRTDLAEAAGLDGAFNAVALRLGPGAAEPDVLAAVDRVLEPWGG
CCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
VGAHARRDQASHRYLSDELTQLRALALVMPAIFLGVAAFLLSVIVSRLVAQQRPQVGMLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALGYSDLALAIHYAKLVGVVVAAGAAAGAAGGALLGRGLARMYAEFYRFPFLVYADAPAV
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHH
VASGAALCALAALVGVAAAVARAARLPPAEAMRPEPPPAFRATRLDRLLAQPGVPPAWRM
HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
VLRNLSRRPVRAGLSALGVACGIAVIVLAGAMQDALHHLLGVQFREARREDAIVVFTEAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHH
GADALAELRALPGVRAAEPFRGVPATLRSGPRSHRTEIAGLDPGARLWRLVDASGREVPV
CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHCCEECCCCCHHHHHHHHCCCCCCCCC
PPAGVVLSSQLARMLAVGPGDTVLAEVHEGRRPVLALPVAALVDDFVGVSATLSRARLDA
CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ALGDGPRASGALLALATGAGPQVEARLAERPRVAAVTLGDELRRSMETVIGRFMGGVVAV
HCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
LAGFALVLAGGVIYNAARVAHAERQRELATLQVLGFTPGEAWRILAGELAVLVLLAIPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
CALGLGLATLTSRLVSSDLFRLPVVISPGTWARAVGVVCAASGLLVALARRWVGKVDLVE
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VLKARE
HHHCCC
>Mature Secondary Structure 
SALDHKAWHDLGRMRGQAVAVGALIASAMAVWVTTVLTERAMLRTRDAYYARQRFADAF
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVRRAPEPVGARLAAVAGVAEVETRVIWPGRLDLPDARRARATFVSLPDRAAPRLNVLA
HHHHCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHEEECCCCCCCCCEEEE
LRAGRLPLPGERGVAVLTEGFAVANRLGPGDDLAAVLNGRRTRLRVVGVALSPEYVYAVG
EECCCCCCCCCCCCEEEECCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEC
PGMLFPDDRSFGVVWAPRTDLAEAAGLDGAFNAVALRLGPGAAEPDVLAAVDRVLEPWGG
CCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
VGAHARRDQASHRYLSDELTQLRALALVMPAIFLGVAAFLLSVIVSRLVAQQRPQVGMLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALGYSDLALAIHYAKLVGVVVAAGAAAGAAGGALLGRGLARMYAEFYRFPFLVYADAPAV
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHH
VASGAALCALAALVGVAAAVARAARLPPAEAMRPEPPPAFRATRLDRLLAQPGVPPAWRM
HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
VLRNLSRRPVRAGLSALGVACGIAVIVLAGAMQDALHHLLGVQFREARREDAIVVFTEAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHH
GADALAELRALPGVRAAEPFRGVPATLRSGPRSHRTEIAGLDPGARLWRLVDASGREVPV
CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHCCEECCCCCHHHHHHHHCCCCCCCCC
PPAGVVLSSQLARMLAVGPGDTVLAEVHEGRRPVLALPVAALVDDFVGVSATLSRARLDA
CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ALGDGPRASGALLALATGAGPQVEARLAERPRVAAVTLGDELRRSMETVIGRFMGGVVAV
HCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
LAGFALVLAGGVIYNAARVAHAERQRELATLQVLGFTPGEAWRILAGELAVLVLLAIPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
CALGLGLATLTSRLVSSDLFRLPVVISPGTWARAVGVVCAASGLLVALARRWVGKVDLVE
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VLKARE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA