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The map label for this gene is 220917920

Identifier: 220917920

GI number: 220917920

Start: 3119139

End: 3120443

Strand: Reverse

Name: 220917920

Synonym: A2cp1_2821

Alternate gene names: NA

Gene position: 3120443-3119139 (Counterclockwise)

Preceding gene: 220917921

Following gene: 220917919

Centisome position: 62.04

GC content: 76.78

Gene sequence:

>1305_bases
ATGCGGGCACGGGCGGAAGCGGCGTCGCTGGACGTGGCGCTCCTGGCGCGGGAGGCGGGGCTGGAGCGCGCGTCGCGGCG
GTGGAGCCGGACCGCGCACGCGGCGGCGCTCGGGTTCGTGGCGATGCTGTACGCGAGCCCGATGTACTGGTGGCCGGAGC
TGGAGCGGCTGCGCCTGGGCTTCGTCACGATGGCCCTGTGCGCGGCGGCGGTGGTCGCGCACCGGCTCTCCTCGGGCGAG
CGCATCCGGCTGGGCGGCGGCGGGAGCCTGCTGCTGCTCGCCTACCTCGCCTTCATCCCGCTCTCGCTCACCTGGACGCT
GTCGCGCCCGGACACGCTCCATGCCGTGGTGGACGGCGCCAAGATGGCGGTGGTCTTCGTCGCGATCCAGAACGCGCTCG
ACGCGCCCTCGCGCCTCGGGCGGTTCCTGCGGGTGGCGGCGCTCGCCTCGCTCGGCCCGGCCCTCGGCGGCGTCTGGGTC
TGGGCCAACGACGACCACCTGGTGGAGGGCTTCCGCACGCACTGGCGCGGCCTGTACGGCGATCCGAACCGCCTGGCGAT
GAGCCTGGTGGCGGTGCTGCCGTTCGCGCTGCTCGGGGCGATGCGCGCGCGCCGGCCGGCCGCGCGGGTGGGGTTCGCCG
GCGTGGTGGCGGCGCAGGTCGCGGCCATCGTGCTCACCCACTCGCGCTCGGGCGCGGTGGCGGCGGCGCTGGCGGCGCTC
CTGTTCCTCCTGCGCGGGCGCGGCGCCAGGCTGCGCGGGCCGCTGGCGGCCGGGGCGCTGCTCGCGGGCGTGGTGGCGCT
CGCGCCGCAGTCGTTCTGGGAGCGGTCGCGCACCATCGCCGACTACCGCGACGACGCCTCGGTGGCCGGCCGCGAGCACG
CCTGGAAGGTGCTCGGGAACATCGTGGACGAGCGGCCGCTCTCCGGCGTCGGGGCGGGCGCGTTCCTGGCCAGCTGGGCG
CGGTACGCGCCGCTGGAGGCGGGGGGCCGCCGCTACGTGGCCCACAACCTCCTGCTCGAGATCGTGGGCGACCTCGGGAT
CATCGCGTTCGGCCTGTTCGCGGCGTTCGTGGCGTGGCTGCTCTGGCAGACGTGGCGCGCCGGCGACGATCCGCTGGTCG
GGCCGGAGGCGCGCGCCGTGTTCGCCGGGCTCGCCGGGTACCTCGTGTGCGAGATGGCGAACGGCTACTCGCTCTCGTGG
TTCCTCTACTTCCTGTTCGCCTGCGCGGTCGCCGCCGTCCGCCTGGCCCGGGTGCGGGCCGCGGCCGGGGAGCGGGCGGC
CCCCGCCCCGGCGCCGGGCTGGTGA

Upstream 100 bases:

>100_bases
GCTGGGAGGCGAAGGTGGACGAGCTGAGGGCGCACGTCGAGGCGGCCGAGCGCGGCGCGGTGCCCGCGCGCATCCAGGCC
GTGCCGGGCTAGGGGGCTGG

Downstream 100 bases:

>100_bases
CGCCGTGCCCGAGCCGCGGCGGATCCTGATCTTCCAGAACCGCTTCCGCATCGGCGGGCAGGAGCGGCAGACGGTCCTGA
ACGTCCGGTCGATGGACCGC

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRARAEAASLDVALLAREAGLERASRRWSRTAHAAALGFVAMLYASPMYWWPELERLRLGFVTMALCAAAVVAHRLSSGE
RIRLGGGGSLLLLAYLAFIPLSLTWTLSRPDTLHAVVDGAKMAVVFVAIQNALDAPSRLGRFLRVAALASLGPALGGVWV
WANDDHLVEGFRTHWRGLYGDPNRLAMSLVAVLPFALLGAMRARRPAARVGFAGVVAAQVAAIVLTHSRSGAVAAALAAL
LFLLRGRGARLRGPLAAGALLAGVVALAPQSFWERSRTIADYRDDASVAGREHAWKVLGNIVDERPLSGVGAGAFLASWA
RYAPLEAGGRRYVAHNLLLEIVGDLGIIAFGLFAAFVAWLLWQTWRAGDDPLVGPEARAVFAGLAGYLVCEMANGYSLSW
FLYFLFACAVAAVRLARVRAAAGERAAPAPAPGW

Sequences:

>Translated_434_residues
MRARAEAASLDVALLAREAGLERASRRWSRTAHAAALGFVAMLYASPMYWWPELERLRLGFVTMALCAAAVVAHRLSSGE
RIRLGGGGSLLLLAYLAFIPLSLTWTLSRPDTLHAVVDGAKMAVVFVAIQNALDAPSRLGRFLRVAALASLGPALGGVWV
WANDDHLVEGFRTHWRGLYGDPNRLAMSLVAVLPFALLGAMRARRPAARVGFAGVVAAQVAAIVLTHSRSGAVAAALAAL
LFLLRGRGARLRGPLAAGALLAGVVALAPQSFWERSRTIADYRDDASVAGREHAWKVLGNIVDERPLSGVGAGAFLASWA
RYAPLEAGGRRYVAHNLLLEIVGDLGIIAFGLFAAFVAWLLWQTWRAGDDPLVGPEARAVFAGLAGYLVCEMANGYSLSW
FLYFLFACAVAAVRLARVRAAAGERAAPAPAPGW
>Mature_434_residues
MRARAEAASLDVALLAREAGLERASRRWSRTAHAAALGFVAMLYASPMYWWPELERLRLGFVTMALCAAAVVAHRLSSGE
RIRLGGGGSLLLLAYLAFIPLSLTWTLSRPDTLHAVVDGAKMAVVFVAIQNALDAPSRLGRFLRVAALASLGPALGGVWV
WANDDHLVEGFRTHWRGLYGDPNRLAMSLVAVLPFALLGAMRARRPAARVGFAGVVAAQVAAIVLTHSRSGAVAAALAAL
LFLLRGRGARLRGPLAAGALLAGVVALAPQSFWERSRTIADYRDDASVAGREHAWKVLGNIVDERPLSGVGAGAFLASWA
RYAPLEAGGRRYVAHNLLLEIVGDLGIIAFGLFAAFVAWLLWQTWRAGDDPLVGPEARAVFAGLAGYLVCEMANGYSLSW
FLYFLFACAVAAVRLARVRAAAGERAAPAPAPGW

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46205; Mature: 46205

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARAEAASLDVALLAREAGLERASRRWSRTAHAAALGFVAMLYASPMYWWPELERLRLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FVTMALCAAAVVAHRLSSGERIRLGGGGSLLLLAYLAFIPLSLTWTLSRPDTLHAVVDGA
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCH
KMAVVFVAIQNALDAPSRLGRFLRVAALASLGPALGGVWVWANDDHLVEGFRTHWRGLYG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCCEEEEECCCHHHHHHHHHCCCCCC
DPNRLAMSLVAVLPFALLGAMRARRPAARVGFAGVVAAQVAAIVLTHSRSGAVAAALAAL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LFLLRGRGARLRGPLAAGALLAGVVALAPQSFWERSRTIADYRDDASVAGREHAWKVLGN
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH
IVDERPLSGVGAGAFLASWARYAPLEAGGRRYVAHNLLLEIVGDLGIIAFGLFAAFVAWL
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQTWRAGDDPLVGPEARAVFAGLAGYLVCEMANGYSLSWFLYFLFACAVAAVRLARVRA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAGERAAPAPAPGW
HCCCCCCCCCCCCC
>Mature Secondary Structure
MRARAEAASLDVALLAREAGLERASRRWSRTAHAAALGFVAMLYASPMYWWPELERLRLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FVTMALCAAAVVAHRLSSGERIRLGGGGSLLLLAYLAFIPLSLTWTLSRPDTLHAVVDGA
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCH
KMAVVFVAIQNALDAPSRLGRFLRVAALASLGPALGGVWVWANDDHLVEGFRTHWRGLYG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCCEEEEECCCHHHHHHHHHCCCCCC
DPNRLAMSLVAVLPFALLGAMRARRPAARVGFAGVVAAQVAAIVLTHSRSGAVAAALAAL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LFLLRGRGARLRGPLAAGALLAGVVALAPQSFWERSRTIADYRDDASVAGREHAWKVLGN
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH
IVDERPLSGVGAGAFLASWARYAPLEAGGRRYVAHNLLLEIVGDLGIIAFGLFAAFVAWL
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQTWRAGDDPLVGPEARAVFAGLAGYLVCEMANGYSLSWFLYFLFACAVAAVRLARVRA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAGERAAPAPAPGW
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA