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The map label for this gene is epsD [H]

Identifier: 220917919

GI number: 220917919

Start: 3117992

End: 3119134

Strand: Reverse

Name: epsD [H]

Synonym: A2cp1_2820

Alternate gene names: 220917919

Gene position: 3119134-3117992 (Counterclockwise)

Preceding gene: 220917920

Following gene: 220917912

Centisome position: 62.02

GC content: 74.37

Gene sequence:

>1143_bases
GTGCCCGAGCCGCGGCGGATCCTGATCTTCCAGAACCGCTTCCGCATCGGCGGGCAGGAGCGGCAGACGGTCCTGAACGT
CCGGTCGATGGACCGCGCCCGCTTCGAGCCGGTGGTTGCGGTGCTGCACCTCGACGGCGACCACCTGCAGGACCTGGAGG
TCGCGGGCGTGCGGCCGGTGGTGTTCGACGTGGGCGGGCGCATGATCCGCCCCAACACCGCCTGGCAGCTCGCGCGCATC
GTCCGCTTCGTCCACACCGAGCGGATCGCGGTCATCCACGCCCAGGACGTGTACACGAACGTGCTGGGGGTGCTGGCGGC
CCGGCTGGCGCGGGTCCCGGTCATCCTCACGCGGGTGGACCTGGGCCATCACCTGGAGGGCTACCGGCGACCGCTGCTGC
AGGCGGCTTCCCGGGTGGCCGACCGCGTGCTGGTGAACGCGCTCTGCATCCGCGATCTCGCCGTGCGGGAGGGGGTGGAG
GCGGACCGGGTGGCGGTGGTGCGCAACGGGGTGGACCTGGAGGCGCTGGACCTCGAGGCGCGCCGCGCGCCGGACCACCC
GGTGCCGGAGCCCGGGGCGGTGGTGTGCATCGCGAACATGCACCATCCGGTGAAGGGGCAGTCCGACCTGCTGGTCGCGA
TGCGCGAGGTGCTGCGCACCCGGCCGGACGCGCGTCTGGTGCTGGTGGGCGAGGGCGTGCGGCGCCCGCTGCTGGAGCGC
CTGGCGCGGCGCCTCGGCATCTCCGACCGGTGTTACTTCCTGGGCCACCGGCTGGACGCGCCGGCGCTGCTGGCGCAGGC
GGTGGCGGGCGTGTCCGCGAGCTACGCGGAGGGGATCTCCAACGCGATCCTGGAGAGCATGGCGATGCGGCTCCCGGTGG
TGGCGACGCGCGTCGGCGGGACGCCGGAGGTGGTGCGCGAGGGACAGAACGGCTTCCTCGTGCCGCCCGGCGCGCCGGCG
GCGCTGGCGCGCCGGATCCTCGACCTGCTGCGCGACCCGGCGCTGCGGCGCCGCATGGGCGAGCGGGGCCGGCGGATCGT
GGAGGAGGAGTTCGGGCTGGCGCAGATGCGCCTCTCCTACGACGCGCTGTACCAGGAGCTGACCGAGGATCCCTCGCCGC
GGATCGTGGCCGGGCTGGGGTGA

Upstream 100 bases:

>100_bases
TTCCTGTTCGCCTGCGCGGTCGCCGCCGTCCGCCTGGCCCGGGTGCGGGCCGCGGCCGGGGAGCGGGCGGCCCCCGCCCC
GGCGCCGGGCTGGTGACGCC

Downstream 100 bases:

>100_bases
GCGGGGCGCGCGGTCAGGGCTTCGCCGGCTCCTCCGCGGGGACCGCCGTCTCGCGCTTGTCCGGGGGCTGCGACTCGTAG
CGGCGCATCGGCGACGTGAC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPEPRRILIFQNRFRIGGQERQTVLNVRSMDRARFEPVVAVLHLDGDHLQDLEVAGVRPVVFDVGGRMIRPNTAWQLARI
VRFVHTERIAVIHAQDVYTNVLGVLAARLARVPVILTRVDLGHHLEGYRRPLLQAASRVADRVLVNALCIRDLAVREGVE
ADRVAVVRNGVDLEALDLEARRAPDHPVPEPGAVVCIANMHHPVKGQSDLLVAMREVLRTRPDARLVLVGEGVRRPLLER
LARRLGISDRCYFLGHRLDAPALLAQAVAGVSASYAEGISNAILESMAMRLPVVATRVGGTPEVVREGQNGFLVPPGAPA
ALARRILDLLRDPALRRRMGERGRRIVEEEFGLAQMRLSYDALYQELTEDPSPRIVAGLG

Sequences:

>Translated_380_residues
MPEPRRILIFQNRFRIGGQERQTVLNVRSMDRARFEPVVAVLHLDGDHLQDLEVAGVRPVVFDVGGRMIRPNTAWQLARI
VRFVHTERIAVIHAQDVYTNVLGVLAARLARVPVILTRVDLGHHLEGYRRPLLQAASRVADRVLVNALCIRDLAVREGVE
ADRVAVVRNGVDLEALDLEARRAPDHPVPEPGAVVCIANMHHPVKGQSDLLVAMREVLRTRPDARLVLVGEGVRRPLLER
LARRLGISDRCYFLGHRLDAPALLAQAVAGVSASYAEGISNAILESMAMRLPVVATRVGGTPEVVREGQNGFLVPPGAPA
ALARRILDLLRDPALRRRMGERGRRIVEEEFGLAQMRLSYDALYQELTEDPSPRIVAGLG
>Mature_379_residues
PEPRRILIFQNRFRIGGQERQTVLNVRSMDRARFEPVVAVLHLDGDHLQDLEVAGVRPVVFDVGGRMIRPNTAWQLARIV
RFVHTERIAVIHAQDVYTNVLGVLAARLARVPVILTRVDLGHHLEGYRRPLLQAASRVADRVLVNALCIRDLAVREGVEA
DRVAVVRNGVDLEALDLEARRAPDHPVPEPGAVVCIANMHHPVKGQSDLLVAMREVLRTRPDARLVLVGEGVRRPLLERL
ARRLGISDRCYFLGHRLDAPALLAQAVAGVSASYAEGISNAILESMAMRLPVVATRVGGTPEVVREGQNGFLVPPGAPAA
LARRILDLLRDPALRRRMGERGRRIVEEEFGLAQMRLSYDALYQELTEDPSPRIVAGLG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42067; Mature: 41935

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPRRILIFQNRFRIGGQERQTVLNVRSMDRARFEPVVAVLHLDGDHLQDLEVAGVRPV
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCEE
VFDVGGRMIRPNTAWQLARIVRFVHTERIAVIHAQDVYTNVLGVLAARLARVPVILTRVD
EEECCCEEECCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEC
LGHHLEGYRRPLLQAASRVADRVLVNALCIRDLAVREGVEADRVAVVRNGVDLEALDLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEECCHH
RRAPDHPVPEPGAVVCIANMHHPVKGQSDLLVAMREVLRTRPDARLVLVGEGVRRPLLER
HCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
LARRLGISDRCYFLGHRLDAPALLAQAVAGVSASYAEGISNAILESMAMRLPVVATRVGG
HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCC
TPEVVREGQNGFLVPPGAPAALARRILDLLRDPALRRRMGERGRRIVEEEFGLAQMRLSY
CHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DALYQELTEDPSPRIVAGLG
HHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure 
PEPRRILIFQNRFRIGGQERQTVLNVRSMDRARFEPVVAVLHLDGDHLQDLEVAGVRPV
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCEE
VFDVGGRMIRPNTAWQLARIVRFVHTERIAVIHAQDVYTNVLGVLAARLARVPVILTRVD
EEECCCEEECCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEC
LGHHLEGYRRPLLQAASRVADRVLVNALCIRDLAVREGVEADRVAVVRNGVDLEALDLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEECCHH
RRAPDHPVPEPGAVVCIANMHHPVKGQSDLLVAMREVLRTRPDARLVLVGEGVRRPLLER
HCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
LARRLGISDRCYFLGHRLDAPALLAQAVAGVSASYAEGISNAILESMAMRLPVVATRVGG
HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCC
TPEVVREGQNGFLVPPGAPAALARRILDLLRDPALRRRMGERGRRIVEEEFGLAQMRLSY
CHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DALYQELTEDPSPRIVAGLG
HHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]