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The map label for this gene is 220917913

Identifier: 220917913

GI number: 220917913

Start: 3111562

End: 3112593

Strand: Direct

Name: 220917913

Synonym: A2cp1_2814

Alternate gene names: NA

Gene position: 3111562-3112593 (Clockwise)

Preceding gene: 220917906

Following gene: 220917914

Centisome position: 61.87

GC content: 76.55

Gene sequence:

>1032_bases
ATGACCCCGCGCGCCGCCTGGAACCCGCCCAACCCGTGGGCCGCCGCCGAGATCGAGTGGGACGACGGCCCGCCCCCCGC
GCGGATCACGCTGCTCGAGGACGCGACCCGCGACGTCCTCTCCCGCAACGACAGCCCCGACATCCCGTTCCGCTGGAGCG
TGAACCCGTACCGCGGGTGCATGCACGCGTGCGCGTACTGCTACGCGCGGCCGACGCACGAGTACCTGGGCATGGGCGCG
GGCACCGACTTCGACACCCGCATCGTGGTGAAGCGGCGCGCGCCGGAGCTGCTCCGCGCCGCGTTCGACCGGCCCGGCTG
GAAGGGCGAGGAGGTGGCGTTCTCCGGCGGGACCGACGCGTGGCAGCCGATCGAGGCGGAGCTGAGGCTCACCCGCGGCT
GCCTCGAGGTGTGCGCCGCCTACCGGAACCCGATCCGCGTCGTCACCAAGTCGGCGCTGCTGGAGCGCGACCTCGACCTG
CTGCAGGAGCTGGCGCGGTCCTCCCGCGTGCTGATCTCGGTGAGCCTCCCGTTCCTCGATCCGGCGCTGGCGCGCGCGCT
GGAGCCCTGGGCGCCCTCCCCTGCGCGGCGGCTCCGCCTCATCGAGCGGCTGGCGCGCGCCGGGCTCTCGCCCGGCGTCC
TCGTCGCGCCGGCGATCCCCGGGCTCGACGACCAGGTCCCGCGGGTGCTGGCGGCGGCGGGTGCGGCGGGCGCCGAGCGC
GCCGCGTGGGTCCTGCTGCGCCTTCCCGGATCGGTGGCGCCCGTGTTCGAGCAGCGGCTGCGCGCGGCGCTCCCCGACGC
CGCCGCGCGCGTGATGCACCTGGTGCGCGAGACGCGCGAGGGCCGGACGTACGACCCGGCCTTCCCCACCCGGCGGCGCG
GGACCGGGGCGTACGCCGCCGTGATCGCCCAGGTGTTCGCGCGCCACGCCTCCCGCCTCGGGCTGGACCGGTCCGAGCCC
CCACTCGACGGGCCGTCCCCATTCCGGCGTCCCGGCGCCGGGGGACAGCTGGGGCTGTTTGACCCAACGTGA

Upstream 100 bases:

>100_bases
GCCGGCGGCCGCTGCGCCGCAGCGCTTGCGCCCGCCCCCGCGAAAAGCTCGCGCCCACCGGGGCCTTGAGCCTGAACGTC
CGTTCCGGTACGCATCCGGC

Downstream 100 bases:

>100_bases
AGACGCGGCCCTCCCAGGCGGGTGACTTTCGCGGGATCTCCCGCTAGACAGGGCTCGTGCGGATCGGGATCCAGGCCGGT
GGTGACAGGCCCCTCGCCTC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTPRAAWNPPNPWAAAEIEWDDGPPPARITLLEDATRDVLSRNDSPDIPFRWSVNPYRGCMHACAYCYARPTHEYLGMGA
GTDFDTRIVVKRRAPELLRAAFDRPGWKGEEVAFSGGTDAWQPIEAELRLTRGCLEVCAAYRNPIRVVTKSALLERDLDL
LQELARSSRVLISVSLPFLDPALARALEPWAPSPARRLRLIERLARAGLSPGVLVAPAIPGLDDQVPRVLAAAGAAGAER
AAWVLLRLPGSVAPVFEQRLRAALPDAAARVMHLVRETREGRTYDPAFPTRRRGTGAYAAVIAQVFARHASRLGLDRSEP
PLDGPSPFRRPGAGGQLGLFDPT

Sequences:

>Translated_343_residues
MTPRAAWNPPNPWAAAEIEWDDGPPPARITLLEDATRDVLSRNDSPDIPFRWSVNPYRGCMHACAYCYARPTHEYLGMGA
GTDFDTRIVVKRRAPELLRAAFDRPGWKGEEVAFSGGTDAWQPIEAELRLTRGCLEVCAAYRNPIRVVTKSALLERDLDL
LQELARSSRVLISVSLPFLDPALARALEPWAPSPARRLRLIERLARAGLSPGVLVAPAIPGLDDQVPRVLAAAGAAGAER
AAWVLLRLPGSVAPVFEQRLRAALPDAAARVMHLVRETREGRTYDPAFPTRRRGTGAYAAVIAQVFARHASRLGLDRSEP
PLDGPSPFRRPGAGGQLGLFDPT
>Mature_342_residues
TPRAAWNPPNPWAAAEIEWDDGPPPARITLLEDATRDVLSRNDSPDIPFRWSVNPYRGCMHACAYCYARPTHEYLGMGAG
TDFDTRIVVKRRAPELLRAAFDRPGWKGEEVAFSGGTDAWQPIEAELRLTRGCLEVCAAYRNPIRVVTKSALLERDLDLL
QELARSSRVLISVSLPFLDPALARALEPWAPSPARRLRLIERLARAGLSPGVLVAPAIPGLDDQVPRVLAAAGAAGAERA
AWVLLRLPGSVAPVFEQRLRAALPDAAARVMHLVRETREGRTYDPAFPTRRRGTGAYAAVIAQVFARHASRLGLDRSEPP
LDGPSPFRRPGAGGQLGLFDPT

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37506; Mature: 37375

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRAAWNPPNPWAAAEIEWDDGPPPARITLLEDATRDVLSRNDSPDIPFRWSVNPYRGC
CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCHHHHH
MHACAYCYARPTHEYLGMGAGTDFDTRIVVKRRAPELLRAAFDRPGWKGEEVAFSGGTDA
HHHHHHHHCCCCHHHHCCCCCCCCCCEEEEHHCCHHHHHHHHCCCCCCCCEEEECCCCCC
WQPIEAELRLTRGCLEVCAAYRNPIRVVTKSALLERDLDLLQELARSSRVLISVSLPFLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
PALARALEPWAPSPARRLRLIERLARAGLSPGVLVAPAIPGLDDQVPRVLAAAGAAGAER
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHH
AAWVLLRLPGSVAPVFEQRLRAALPDAAARVMHLVRETREGRTYDPAFPTRRRGTGAYAA
HEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VIAQVFARHASRLGLDRSEPPLDGPSPFRRPGAGGQLGLFDPT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPRAAWNPPNPWAAAEIEWDDGPPPARITLLEDATRDVLSRNDSPDIPFRWSVNPYRGC
CCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCHHHHH
MHACAYCYARPTHEYLGMGAGTDFDTRIVVKRRAPELLRAAFDRPGWKGEEVAFSGGTDA
HHHHHHHHCCCCHHHHCCCCCCCCCCEEEEHHCCHHHHHHHHCCCCCCCCEEEECCCCCC
WQPIEAELRLTRGCLEVCAAYRNPIRVVTKSALLERDLDLLQELARSSRVLISVSLPFLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
PALARALEPWAPSPARRLRLIERLARAGLSPGVLVAPAIPGLDDQVPRVLAAAGAAGAER
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHH
AAWVLLRLPGSVAPVFEQRLRAALPDAAARVMHLVRETREGRTYDPAFPTRRRGTGAYAA
HEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VIAQVFARHASRLGLDRSEPPLDGPSPFRRPGAGGQLGLFDPT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]