| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917854
Identifier: 220917854
GI number: 220917854
Start: 3036304
End: 3038706
Strand: Direct
Name: 220917854
Synonym: A2cp1_2755
Alternate gene names: NA
Gene position: 3036304-3038706 (Clockwise)
Preceding gene: 220917848
Following gene: 220917856
Centisome position: 60.37
GC content: 75.11
Gene sequence:
>2403_bases ATGACGAAGACTTCGACGGTGCTCGCGCTCGTGATCGCGGGCTGTGGCGGCAGCGGTGGCGGCGGCTCGCAGGTCGGGCA GGTCGTCACGGTGGTGCGGACCGACGCCTTGACGGCGCCGGACCAGGTGACGGCGGTGAGGGTGTTCGCCTCGCCGGCGA ACGTCACGCAGGACCTGGCACACCAGCCGGACGGCACCTTCGGCGGCGTGCTCACGCTGCCCGTCGGCGTGCAGACCATC ACGGTCTCGGTGTATGCGGGCCCGTCCGTCGTCGGCACCGGCGCCGCCACCGTCGCCATCCAGGCGAACGCGGCCTCCCA GGTCACGCTCCGCATCGTGGACAGCACCGGCCCCGGCCCCACGCCGGGCCAGGGCCCGATCATCGTCGCCCTCTCGGCCT CCAAGATGACGCCGCTCGTGGGCGAGTCCATCGCCCTGAGCGCGCGCGTGGTGGCGCCCGCGGGCGCGGCCGTGACCTAC GCATGGTCCCAGGATTGCGCCTCCGGAACCTTCACCACGCCGGCCGCCGAGTCCACGAGCTGGTCCTCGAGCGCGGCGGG CGCCTGCGCGCTCACGCTGACCGCCACCGCGAACGGCCTCGCCGACGCGAGCGCGGTCGCCATCCAGGTGCTGGCGCCGG GGAGCGCCACCGGGTCGGTGTCGATCGTGGGCACGTTCGTGCCCCGCACCACCATCGGCGCCATCTCCGCCTACCCCTCC CCCGCCGCGACGGAGGCGGGCTGCACGGTCGGCCGCACCGGCGCCGACGGCACCTGCCGCATGGCGGTCCACTCCGGCCA GACGATCGGGATCACGCTCGACCCCGGGGCGGCCCCCGGCGCCGCCACCTACGCGCTCCGGGACGGCTGCGGCGGCGCCA TCGTCCCCGGCGCCGCGGCGTCCTCCTTCCAGTGGACGCCGCCGTCGGCGGGCGGCTTCTGCGTGCTCACCGGGACCAAG GTCGAGGACGGCGTCGCCGACGCCTTCGCGTTCGGGCTGTACGCCGACCCCGTGCTCGCCCCGTCGCCCCGGCAGGCCTT CGACTGGACGCCGCACGCGGTGGGGACGGCACCGCCGCCCCACGCCTTCGTCGAGCAGCCCACCACGGCCGCGCACGTGG TCTGGAGCGGCACGACCTTCGCGGACACGCATGGCCGCATCACCTTCGTCCCGCAGGGCGCGCTGCCGTCCACCACCGCC GTGGGCCTCTGGAGCCCGGCGGAGACGCTGGTCGGCCCATGGGCCACCGGCGCGACCCGGTTCGTGGCCGACGCGGCGCA CGGGGCGAGCGCGGTGGACACCTCCGGTGACTTCACGGTCTGCGTGAAGTTCAAGCCCGGCCTCCACCCCGGGATGACGG CGCCCAACAAGACGCTGGTGGCGCGCGGGCAGGCCGAGTTCCCCACCGCGGCGTGGCCGGAAGGCTGGGCGCTCATGCAG ATGCACGAGGCCTACTGCTTCCACTACCTCACGGCGACCGCCGGAGGCGCCATCATGTCGCCGGACACGAGCGTGACGCC GGAGGCGGTCGAGACCTACGCGTTCGACTACATGTGCGGCGGGCGCGCCGGCGGGCAGATCCTCGCCGGCGCACATGGCC AGAGCGGCGCGCTCGCCACCGCGGTCGCCACCGCGTTCTCCGACGAGTCCGCCCTGCCGCTGTCCATCGGCTCGTACCCG ACCGGCGACGACCCCACGCTGGACGCCTCCGTCTACGAGGTGATCTTCGACACGCGCCCGGCGACGGTGGACACGTTCCG CGACATCGTCGGCGCTGCGGAAGGCACGCGTCTCGCGAACGGCGCGGTGTGGGTCCCGCGGCGCGTCGCGGGGGAGACGG CGACCGGCGCCGACGGTCAGGGCTACCCGCTGCCTCCCTACGCGAACCCGGGGCGGTGGCCCGTCCCGGTGGTGGACGGG ACGGTCCCCGGCAACGCCCAGCTCGGCTACCGCCGGCCGCTCGCGGAGCGGACCTCGACGACCGGCTACTGCATCGGCGC GGAGCTGGTCGCGGACGGCGCGTGGGCCGACGTCGGCGGGATCGTCCTCACGTTCATCGACGACGCGGCCACGCAGTCCA CCCGGCTCTACCTCGACCCCCGCGTCTGCTTCGCCACGGAGGCACCGGGGCAGGCGGCGACGTCGGCGTGCAGCGCCTCG ACGCTGCCCTACGACTCGTGGCCGCCGGGTTCGCTGCACCGGTTCACCGCCTGCGCCGACGCCAGCAGCGGGGCGCTGAC CGCCTACGTGGACGGCGCCGCCACGTCCGTGCTGCCCGCCGGAGCCACCGGCGGCGTCCCGGACCTCTCGAGTGGCGTGC TCACCATCGGCTCCAGCCTGGGCGGCGCCAGCATCTCGCGGGTCTTCGCCTGCCCGTTCGCGGACGCGGCGCGCTGCCAG TGA
Upstream 100 bases:
>100_bases CACGTCGGGCGCCTGCTCTGGTGGCGCGTCACGGGGATGGCGCTGCCGGCGGATCGACGCCGCCGAGCGACCGGGGATGG GGGCGCGGGGGGCCCGACCG
Downstream 100 bases:
>100_bases GCCCGGCGCGAGCCGGGGGGCCGGTGCGCGCGCCGGTGTTCGATCGCCGCGCGGGCGCGTCGCCGGCCGCGACGACTTCG CGTCAGGGCGCCGCCGGAGC
Product: PKD domain containing protein
Products: NA
Alternate protein names: PKD Domain Containing Protein
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTKTSTVLALVIAGCGGSGGGGSQVGQVVTVVRTDALTAPDQVTAVRVFASPANVTQDLAHQPDGTFGGVLTLPVGVQTI TVSVYAGPSVVGTGAATVAIQANAASQVTLRIVDSTGPGPTPGQGPIIVALSASKMTPLVGESIALSARVVAPAGAAVTY AWSQDCASGTFTTPAAESTSWSSSAAGACALTLTATANGLADASAVAIQVLAPGSATGSVSIVGTFVPRTTIGAISAYPS PAATEAGCTVGRTGADGTCRMAVHSGQTIGITLDPGAAPGAATYALRDGCGGAIVPGAAASSFQWTPPSAGGFCVLTGTK VEDGVADAFAFGLYADPVLAPSPRQAFDWTPHAVGTAPPPHAFVEQPTTAAHVVWSGTTFADTHGRITFVPQGALPSTTA VGLWSPAETLVGPWATGATRFVADAAHGASAVDTSGDFTVCVKFKPGLHPGMTAPNKTLVARGQAEFPTAAWPEGWALMQ MHEAYCFHYLTATAGGAIMSPDTSVTPEAVETYAFDYMCGGRAGGQILAGAHGQSGALATAVATAFSDESALPLSIGSYP TGDDPTLDASVYEVIFDTRPATVDTFRDIVGAAEGTRLANGAVWVPRRVAGETATGADGQGYPLPPYANPGRWPVPVVDG TVPGNAQLGYRRPLAERTSTTGYCIGAELVADGAWADVGGIVLTFIDDAATQSTRLYLDPRVCFATEAPGQAATSACSAS TLPYDSWPPGSLHRFTACADASSGALTAYVDGAATSVLPAGATGGVPDLSSGVLTIGSSLGGASISRVFACPFADAARCQ
Sequences:
>Translated_800_residues MTKTSTVLALVIAGCGGSGGGGSQVGQVVTVVRTDALTAPDQVTAVRVFASPANVTQDLAHQPDGTFGGVLTLPVGVQTI TVSVYAGPSVVGTGAATVAIQANAASQVTLRIVDSTGPGPTPGQGPIIVALSASKMTPLVGESIALSARVVAPAGAAVTY AWSQDCASGTFTTPAAESTSWSSSAAGACALTLTATANGLADASAVAIQVLAPGSATGSVSIVGTFVPRTTIGAISAYPS PAATEAGCTVGRTGADGTCRMAVHSGQTIGITLDPGAAPGAATYALRDGCGGAIVPGAAASSFQWTPPSAGGFCVLTGTK VEDGVADAFAFGLYADPVLAPSPRQAFDWTPHAVGTAPPPHAFVEQPTTAAHVVWSGTTFADTHGRITFVPQGALPSTTA VGLWSPAETLVGPWATGATRFVADAAHGASAVDTSGDFTVCVKFKPGLHPGMTAPNKTLVARGQAEFPTAAWPEGWALMQ MHEAYCFHYLTATAGGAIMSPDTSVTPEAVETYAFDYMCGGRAGGQILAGAHGQSGALATAVATAFSDESALPLSIGSYP TGDDPTLDASVYEVIFDTRPATVDTFRDIVGAAEGTRLANGAVWVPRRVAGETATGADGQGYPLPPYANPGRWPVPVVDG TVPGNAQLGYRRPLAERTSTTGYCIGAELVADGAWADVGGIVLTFIDDAATQSTRLYLDPRVCFATEAPGQAATSACSAS TLPYDSWPPGSLHRFTACADASSGALTAYVDGAATSVLPAGATGGVPDLSSGVLTIGSSLGGASISRVFACPFADAARCQ >Mature_799_residues TKTSTVLALVIAGCGGSGGGGSQVGQVVTVVRTDALTAPDQVTAVRVFASPANVTQDLAHQPDGTFGGVLTLPVGVQTIT VSVYAGPSVVGTGAATVAIQANAASQVTLRIVDSTGPGPTPGQGPIIVALSASKMTPLVGESIALSARVVAPAGAAVTYA WSQDCASGTFTTPAAESTSWSSSAAGACALTLTATANGLADASAVAIQVLAPGSATGSVSIVGTFVPRTTIGAISAYPSP AATEAGCTVGRTGADGTCRMAVHSGQTIGITLDPGAAPGAATYALRDGCGGAIVPGAAASSFQWTPPSAGGFCVLTGTKV EDGVADAFAFGLYADPVLAPSPRQAFDWTPHAVGTAPPPHAFVEQPTTAAHVVWSGTTFADTHGRITFVPQGALPSTTAV GLWSPAETLVGPWATGATRFVADAAHGASAVDTSGDFTVCVKFKPGLHPGMTAPNKTLVARGQAEFPTAAWPEGWALMQM HEAYCFHYLTATAGGAIMSPDTSVTPEAVETYAFDYMCGGRAGGQILAGAHGQSGALATAVATAFSDESALPLSIGSYPT GDDPTLDASVYEVIFDTRPATVDTFRDIVGAAEGTRLANGAVWVPRRVAGETATGADGQGYPLPPYANPGRWPVPVVDGT VPGNAQLGYRRPLAERTSTTGYCIGAELVADGAWADVGGIVLTFIDDAATQSTRLYLDPRVCFATEAPGQAATSACSAST LPYDSWPPGSLHRFTACADASSGALTAYVDGAATSVLPAGATGGVPDLSSGVLTIGSSLGGASISRVFACPFADAARCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79794; Mature: 79662
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTSTVLALVIAGCGGSGGGGSQVGQVVTVVRTDALTAPDQVTAVRVFASPANVTQDLA CCCHHEEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHH HQPDGTFGGVLTLPVGVQTITVSVYAGPSVVGTGAATVAIQANAASQVTLRIVDSTGPGP CCCCCCCCCEEEECCCEEEEEEEEEECCCEEECCCEEEEEEECCCCEEEEEEEECCCCCC TPGQGPIIVALSASKMTPLVGESIALSARVVAPAGAAVTYAWSQDCASGTFTTPAAESTS CCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC WSSSAAGACALTLTATANGLADASAVAIQVLAPGSATGSVSIVGTFVPRTTIGAISAYPS CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHEECCCC PAATEAGCTVGRTGADGTCRMAVHSGQTIGITLDPGAAPGAATYALRDGCGGAIVPGAAA CCCCCCCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC SSFQWTPPSAGGFCVLTGTKVEDGVADAFAFGLYADPVLAPSPRQAFDWTPHAVGTAPPP CCEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC HAFVEQPTTAAHVVWSGTTFADTHGRITFVPQGALPSTTAVGLWSPAETLVGPWATGATR HHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCCCCHH FVADAAHGASAVDTSGDFTVCVKFKPGLHPGMTAPNKTLVARGQAEFPTAAWPEGWALMQ HHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH MHEAYCFHYLTATAGGAIMSPDTSVTPEAVETYAFDYMCGGRAGGQILAGAHGQSGALAT HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCCCCHHH AVATAFSDESALPLSIGSYPTGDDPTLDASVYEVIFDTRPATVDTFRDIVGAAEGTRLAN HHHHHCCCCCCCEEEECCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEECC GAVWVPRRVAGETATGADGQGYPLPPYANPGRWPVPVVDGTVPGNAQLGYRRPLAERTST CEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCC TGYCIGAELVADGAWADVGGIVLTFIDDAATQSTRLYLDPRVCFATEAPGQAATSACSAS CEEEEEHHEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCC TLPYDSWPPGSLHRFTACADASSGALTAYVDGAATSVLPAGATGGVPDLSSGVLTIGSSL CCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHEEECCCCCCCCCCCCCCEEEECCCC GGASISRVFACPFADAARCQ CCCCEEEEEECCCCHHHCCC >Mature Secondary Structure TKTSTVLALVIAGCGGSGGGGSQVGQVVTVVRTDALTAPDQVTAVRVFASPANVTQDLA CCHHEEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHH HQPDGTFGGVLTLPVGVQTITVSVYAGPSVVGTGAATVAIQANAASQVTLRIVDSTGPGP CCCCCCCCCEEEECCCEEEEEEEEEECCCEEECCCEEEEEEECCCCEEEEEEEECCCCCC TPGQGPIIVALSASKMTPLVGESIALSARVVAPAGAAVTYAWSQDCASGTFTTPAAESTS CCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC WSSSAAGACALTLTATANGLADASAVAIQVLAPGSATGSVSIVGTFVPRTTIGAISAYPS CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHEECCCC PAATEAGCTVGRTGADGTCRMAVHSGQTIGITLDPGAAPGAATYALRDGCGGAIVPGAAA CCCCCCCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC SSFQWTPPSAGGFCVLTGTKVEDGVADAFAFGLYADPVLAPSPRQAFDWTPHAVGTAPPP CCEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC HAFVEQPTTAAHVVWSGTTFADTHGRITFVPQGALPSTTAVGLWSPAETLVGPWATGATR HHHHCCCCCEEEEEECCCEEECCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCCCCHH FVADAAHGASAVDTSGDFTVCVKFKPGLHPGMTAPNKTLVARGQAEFPTAAWPEGWALMQ HHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH MHEAYCFHYLTATAGGAIMSPDTSVTPEAVETYAFDYMCGGRAGGQILAGAHGQSGALAT HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCCCCHHH AVATAFSDESALPLSIGSYPTGDDPTLDASVYEVIFDTRPATVDTFRDIVGAAEGTRLAN HHHHHCCCCCCCEEEECCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEECC GAVWVPRRVAGETATGADGQGYPLPPYANPGRWPVPVVDGTVPGNAQLGYRRPLAERTST CEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCC TGYCIGAELVADGAWADVGGIVLTFIDDAATQSTRLYLDPRVCFATEAPGQAATSACSAS CEEEEEHHEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCC TLPYDSWPPGSLHRFTACADASSGALTAYVDGAATSVLPAGATGGVPDLSSGVLTIGSSL CCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHEEECCCCCCCCCCCCCCEEEECCCC GGASISRVFACPFADAARCQ CCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA