| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917848
Identifier: 220917848
GI number: 220917848
Start: 3030734
End: 3032566
Strand: Direct
Name: 220917848
Synonym: A2cp1_2749
Alternate gene names: NA
Gene position: 3030734-3032566 (Clockwise)
Preceding gene: 220917847
Following gene: 220917854
Centisome position: 60.26
GC content: 74.63
Gene sequence:
>1833_bases ATGGACCGCTCTCCACGACGCCCCGTCCGGCTGGCTGCCCTCGCCGTCGCGCTCGTCGCGGTCCTCCCCTACCTCCACAC GCTGCGACACGGGTTCGCGTACGACGACCGCGTCGAGGTCGTCGAGAACGCGTACCTCCGCGGCGTCGAGGGGGTACCGG CTATCCTCTCCCATCGCGACTGGGCAGGATCGGGCAAGGGGTCCGCCACCTACCGGCCGCTCACCACCCTCTCCTTCGCC CTGAATCACGCGGTCCACGGGCTCGCCCCGTCGGGCTATCACCTCGTCAACCTGCTGCTCCACGCGGCCGTTTCCGTCCT GGTGCTCGGGCTCGCGCTCGGGCTCGGGCTCCCCCTGGCGGCCGCCACGCTGGCCGGCCTGCTCTTCGCGGTCCACCCCA TCCACGTGGAGGCGGTGGCGAACGTGGCCGGGCGCAAGGAGCTCCTGGTCACCGCCTTCACCCTGGGTGCCGTGCTCCTC CACCCGGTCGCGCTCCGCCGCGGAGGCCTCCGACTCGTCGCCGCGCCGCTGCTCGGCGCGCTGGCGGCCTTCTCCAAGGA GACCGGGCTCGTCCTGATCGGCCTGATCGTCGCGCTCGACCTGCTCTTCCGCCGCGCCGAGGTCCGCGCCGCACCGCGCC GCGCGGCCACGCTCTACGCGTCCTACCTCGCGGCCGCCGGCGCCTACCTCGCCGCCCGCTGGGCCGTGCTGGGAAGCCTG GGTATGCCGGGCACGATCTTCCTGGTGAACCCGATCGCCGATGCACCGCTCCTCGAGCGGATCGCGACCGCGCTGGTCGT GCTCGGGAAGGGCCTCCAGCTCTCGATCGCGCCGGCCACGCTGTCGCCCGACTACTCGTACGCCGCGATCCCGCCGGTTG CCTCCGCCCTCGACCCGCGCCTGGCCCTGGCGGTCGCCGCGCTCGCAGGCGCGGCCGCGTTCGCTGCTTGGCCCGGGCGG CGCCGGCGCGTGCGGCTCGCCGCGGCGGCCATCTACGCCTTCGGCGTCTTCCCCGCGTCGAACCTGCTCGTCCCCATCGG GACGATCTTCGGGGAACGGCTGCTTTACCTCCCCAGCGTCGGCTTCGTCCTCGGGGTCGCCGCGGTGATGGCCACCGTCC TCGAGGGACCGCGCCGCGTAGCGCTCCGCACGATCACCGGGGTCGCGCTCGCGCTGCTGGCGGTCCGCGGCGCGTGGTAC GCACGGGCCTGGTCGAACAGCCTCTCCATCTTTGCCGAGGGCGTGCGGGTCCAGCCGGCCTCGGCCCAGATGCAGCTCAC CTATGGCGCGCAGTTGCTCGGGCGCAAGGAGATGGCCGGAGCGGCCGCCGCCTTCGCGCGCGCGGCGGAGATCCTGGCCG TGCGGCCCGACGCCCAGTCGGACGCCCTGGTGCAGCTCGGGGTCGCCTATGAGCAGCTCGGCCGGGCCGAGGAGGCGGAG CAGCTGTACGCCCGCGTCCTCGCGCGGGAACACCGCCATCCGGACGCGCTGTGGCGGATGGGCGTCCGGCGCTGGGCCCA GGGGGATCCACCGGGCGCCGTCCAGCTCTGGGAGCGAGCGATCGCGGCCGAGCCGCGGCACGCCCCCGCGCTCTCGGACC TCGGCTTGGCCGCCTACGCCGCCGGCGATCTCCAGGGCGCCGAGGCGCGCTTCCGCGAGGCTGCGGCGATCGCGCCGACG CTGCCGGGGGTCTGGTACAAGCTCGGCGTGGTCTGCGAGCAGCTGGGGCGCCGCGAGGAGGCGCTGGCCGCCTGGCGCCG CTTCCTCGAGCTCGCTCCGGAGCCTTCGCTCGAGCGAGACGAGATCGAGCGGCGTCTCGCCGCCAGTCCGTGA
Upstream 100 bases:
>100_bases GCTGGTGGCGACGACCTGAGCGTCGCTCATCGGCGCGGGCGGGCCTGCCGCCAGGTGACCGCGCCTCGCCCGCGGTGGTA GCATCCGCGGCCGATCTTCG
Downstream 100 bases:
>100_bases GCGCGGACCTCCCGCGATCGCCGTCGTGCCGGTCCTCCGCGCGATGGGCCAACGCCGCCGGAAGCGCTCGAGCCGCGAGG CGCGGGCTTCGCCGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MDRSPRRPVRLAALAVALVAVLPYLHTLRHGFAYDDRVEVVENAYLRGVEGVPAILSHRDWAGSGKGSATYRPLTTLSFA LNHAVHGLAPSGYHLVNLLLHAAVSVLVLGLALGLGLPLAAATLAGLLFAVHPIHVEAVANVAGRKELLVTAFTLGAVLL HPVALRRGGLRLVAAPLLGALAAFSKETGLVLIGLIVALDLLFRRAEVRAAPRRAATLYASYLAAAGAYLAARWAVLGSL GMPGTIFLVNPIADAPLLERIATALVVLGKGLQLSIAPATLSPDYSYAAIPPVASALDPRLALAVAALAGAAAFAAWPGR RRRVRLAAAAIYAFGVFPASNLLVPIGTIFGERLLYLPSVGFVLGVAAVMATVLEGPRRVALRTITGVALALLAVRGAWY ARAWSNSLSIFAEGVRVQPASAQMQLTYGAQLLGRKEMAGAAAAFARAAEILAVRPDAQSDALVQLGVAYEQLGRAEEAE QLYARVLAREHRHPDALWRMGVRRWAQGDPPGAVQLWERAIAAEPRHAPALSDLGLAAYAAGDLQGAEARFREAAAIAPT LPGVWYKLGVVCEQLGRREEALAAWRRFLELAPEPSLERDEIERRLAASP
Sequences:
>Translated_610_residues MDRSPRRPVRLAALAVALVAVLPYLHTLRHGFAYDDRVEVVENAYLRGVEGVPAILSHRDWAGSGKGSATYRPLTTLSFA LNHAVHGLAPSGYHLVNLLLHAAVSVLVLGLALGLGLPLAAATLAGLLFAVHPIHVEAVANVAGRKELLVTAFTLGAVLL HPVALRRGGLRLVAAPLLGALAAFSKETGLVLIGLIVALDLLFRRAEVRAAPRRAATLYASYLAAAGAYLAARWAVLGSL GMPGTIFLVNPIADAPLLERIATALVVLGKGLQLSIAPATLSPDYSYAAIPPVASALDPRLALAVAALAGAAAFAAWPGR RRRVRLAAAAIYAFGVFPASNLLVPIGTIFGERLLYLPSVGFVLGVAAVMATVLEGPRRVALRTITGVALALLAVRGAWY ARAWSNSLSIFAEGVRVQPASAQMQLTYGAQLLGRKEMAGAAAAFARAAEILAVRPDAQSDALVQLGVAYEQLGRAEEAE QLYARVLAREHRHPDALWRMGVRRWAQGDPPGAVQLWERAIAAEPRHAPALSDLGLAAYAAGDLQGAEARFREAAAIAPT LPGVWYKLGVVCEQLGRREEALAAWRRFLELAPEPSLERDEIERRLAASP >Mature_610_residues MDRSPRRPVRLAALAVALVAVLPYLHTLRHGFAYDDRVEVVENAYLRGVEGVPAILSHRDWAGSGKGSATYRPLTTLSFA LNHAVHGLAPSGYHLVNLLLHAAVSVLVLGLALGLGLPLAAATLAGLLFAVHPIHVEAVANVAGRKELLVTAFTLGAVLL HPVALRRGGLRLVAAPLLGALAAFSKETGLVLIGLIVALDLLFRRAEVRAAPRRAATLYASYLAAAGAYLAARWAVLGSL GMPGTIFLVNPIADAPLLERIATALVVLGKGLQLSIAPATLSPDYSYAAIPPVASALDPRLALAVAALAGAAAFAAWPGR RRRVRLAAAAIYAFGVFPASNLLVPIGTIFGERLLYLPSVGFVLGVAAVMATVLEGPRRVALRTITGVALALLAVRGAWY ARAWSNSLSIFAEGVRVQPASAQMQLTYGAQLLGRKEMAGAAAAFARAAEILAVRPDAQSDALVQLGVAYEQLGRAEEAE QLYARVLAREHRHPDALWRMGVRRWAQGDPPGAVQLWERAIAAEPRHAPALSDLGLAAYAAGDLQGAEARFREAAAIAPT LPGVWYKLGVVCEQLGRREEALAAWRRFLELAPEPSLERDEIERRLAASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI224809432, Length=644, Percent_Identity=27.0186335403727, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI118766330, Length=670, Percent_Identity=27.1641791044776, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI118766328, Length=670, Percent_Identity=27.1641791044776, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI301336134, Length=632, Percent_Identity=27.2151898734177, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI83415184, Length=555, Percent_Identity=26.3063063063063, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI22749211, Length=320, Percent_Identity=32.5, Blast_Score=108, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25147174, Length=613, Percent_Identity=27.2430668841762, Blast_Score=182, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17560436, Length=446, Percent_Identity=31.8385650224215, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24647123, Length=587, Percent_Identity=27.2572402044293, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24656717, Length=687, Percent_Identity=25.764192139738, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI18110006, Length=687, Percent_Identity=25.764192139738, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI19920486, Length=314, Percent_Identity=33.7579617834395, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI161076610, Length=308, Percent_Identity=34.0909090909091, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281364285, Length=329, Percent_Identity=30.6990881458967, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24581187, Length=329, Percent_Identity=30.6990881458967, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64482; Mature: 64482
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSPRRPVRLAALAVALVAVLPYLHTLRHGFAYDDRVEVVENAYLRGVEGVPAILSHRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC WAGSGKGSATYRPLTTLSFALNHAVHGLAPSGYHLVNLLLHAAVSVLVLGLALGLGLPLA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AATLAGLLFAVHPIHVEAVANVAGRKELLVTAFTLGAVLLHPVALRRGGLRLVAAPLLGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAAFSKETGLVLIGLIVALDLLFRRAEVRAAPRRAATLYASYLAAAGAYLAARWAVLGSL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMPGTIFLVNPIADAPLLERIATALVVLGKGLQLSIAPATLSPDYSYAAIPPVASALDPR CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCHH LALAVAALAGAAAFAAWPGRRRRVRLAAAAIYAFGVFPASNLLVPIGTIFGERLLYLPSV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCH GFVLGVAAVMATVLEGPRRVALRTITGVALALLAVRGAWYARAWSNSLSIFAEGVRVQPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCC SAQMQLTYGAQLLGRKEMAGAAAAFARAAEILAVRPDAQSDALVQLGVAYEQLGRAEEAE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHH QLYARVLAREHRHPDALWRMGVRRWAQGDPPGAVQLWERAIAAEPRHAPALSDLGLAAYA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHH AGDLQGAEARFREAAAIAPTLPGVWYKLGVVCEQLGRREEALAAWRRFLELAPEPSLERD CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHH EIERRLAASP HHHHHHCCCC >Mature Secondary Structure MDRSPRRPVRLAALAVALVAVLPYLHTLRHGFAYDDRVEVVENAYLRGVEGVPAILSHRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC WAGSGKGSATYRPLTTLSFALNHAVHGLAPSGYHLVNLLLHAAVSVLVLGLALGLGLPLA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AATLAGLLFAVHPIHVEAVANVAGRKELLVTAFTLGAVLLHPVALRRGGLRLVAAPLLGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAAFSKETGLVLIGLIVALDLLFRRAEVRAAPRRAATLYASYLAAAGAYLAARWAVLGSL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMPGTIFLVNPIADAPLLERIATALVVLGKGLQLSIAPATLSPDYSYAAIPPVASALDPR CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCHH LALAVAALAGAAAFAAWPGRRRRVRLAAAAIYAFGVFPASNLLVPIGTIFGERLLYLPSV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCH GFVLGVAAVMATVLEGPRRVALRTITGVALALLAVRGAWYARAWSNSLSIFAEGVRVQPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCC SAQMQLTYGAQLLGRKEMAGAAAAFARAAEILAVRPDAQSDALVQLGVAYEQLGRAEEAE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHH QLYARVLAREHRHPDALWRMGVRRWAQGDPPGAVQLWERAIAAEPRHAPALSDLGLAAYA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHH AGDLQGAEARFREAAAIAPTLPGVWYKLGVVCEQLGRREEALAAWRRFLELAPEPSLERD CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHH EIERRLAASP HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA