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The map label for this gene is yjbJ [H]

Identifier: 220917758

GI number: 220917758

Start: 2935774

End: 2936460

Strand: Reverse

Name: yjbJ [H]

Synonym: A2cp1_2659

Alternate gene names: 220917758

Gene position: 2936460-2935774 (Counterclockwise)

Preceding gene: 220917759

Following gene: 220917757

Centisome position: 58.39

GC content: 77.15

Gene sequence:

>687_bases
ATGCCGCGGCTCAGCGGGCTCCTCGGGGCCGCCCTGGCCATCACCGCGTGGGTGGTGGTCGCGGCGTTCCCGCGGACGCT
CTCGCACGAGGCGCGGACGCACGGGACCGGCGAGCCGGGCTGCGGCGCGAGCGGGTGCGAGCCCGAGGCCGATCCGCTGG
TCGAGGCCATCGACGCGCAGATCGCCGCGCGGATGCCCGGGCTGGCCGACGGCGACCGGACCCGGCTGGCGAGCACCATC
GTGCTGGAGGCCGAGGCGGCGCGGATCGACCCGCTGCTGGTGCTCGCGCTCATCGAGGTCGAGTCCTCCTTCGACGCCCG
CGCGCTGTCCGGTGCGGGCGCGAAGGGGCTCATGCAGCTCCGCGAGTCCACCCTGCGCCGCGAGCTGGAGCGCGTCGGCC
TCCCGGCGGGGGACCCGCACGATCCGGTGCTCAACGTGCGCGCGGGGGTGCGCTACCTGCGCCGGCTCCTCGACGCCTTC
GGGCGCGAGGAGGTGGCGCTGATGGCCTACAACGCCGGCCCGAACCGGATCCTGGGCTACCTGCGCGAGGGCGCGATCCC
GCAGCGCTTCCACGTGTACCCGCGGCGCGTGAAGGCGGAGCTGCGCCGGATCCGGCGCGACATCGGCGACGAGCGCCCGG
CCGAGGCGGTGGCGGCCGCCGCCGCGCCCGCGCCGGTGGCCGAGTAG

Upstream 100 bases:

>100_bases
AGCGTCGCCTCGACGCCGTCTCCGAGCGCGTGGAGGCGCTGTCGCGGCGCGCGCCGGTCGCGCCGCCGCCGCCGCGGCAG
GAGCAGGGGGAATAGTGCGG

Downstream 100 bases:

>100_bases
GGCCGATCTCGGTTACACCCTGTCCCCGTCCGCCCGGCCCCGCCGGGCGCCAGGCTCCCATGCGCGTCACCGAGATCTTC
TTCAGCATCCAGGGCGAGGG

Product: lytic transglycosylase

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MPRLSGLLGAALAITAWVVVAAFPRTLSHEARTHGTGEPGCGASGCEPEADPLVEAIDAQIAARMPGLADGDRTRLASTI
VLEAEAARIDPLLVLALIEVESSFDARALSGAGAKGLMQLRESTLRRELERVGLPAGDPHDPVLNVRAGVRYLRRLLDAF
GREEVALMAYNAGPNRILGYLREGAIPQRFHVYPRRVKAELRRIRRDIGDERPAEAVAAAAAPAPVAE

Sequences:

>Translated_228_residues
MPRLSGLLGAALAITAWVVVAAFPRTLSHEARTHGTGEPGCGASGCEPEADPLVEAIDAQIAARMPGLADGDRTRLASTI
VLEAEAARIDPLLVLALIEVESSFDARALSGAGAKGLMQLRESTLRRELERVGLPAGDPHDPVLNVRAGVRYLRRLLDAF
GREEVALMAYNAGPNRILGYLREGAIPQRFHVYPRRVKAELRRIRRDIGDERPAEAVAAAAAPAPVAE
>Mature_227_residues
PRLSGLLGAALAITAWVVVAAFPRTLSHEARTHGTGEPGCGASGCEPEADPLVEAIDAQIAARMPGLADGDRTRLASTIV
LEAEAARIDPLLVLALIEVESSFDARALSGAGAKGLMQLRESTLRRELERVGLPAGDPHDPVLNVRAGVRYLRRLLDAFG
REEVALMAYNAGPNRILGYLREGAIPQRFHVYPRRVKAELRRIRRDIGDERPAEAVAAAAAPAPVAE

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 24360; Mature: 24229

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLSGLLGAALAITAWVVVAAFPRTLSHEARTHGTGEPGCGASGCEPEADPLVEAIDAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
IAARMPGLADGDRTRLASTIVLEAEAARIDPLLVLALIEVESSFDARALSGAGAKGLMQL
HHHHCCCCCCCCHHHHHHHHHEEHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
RESTLRRELERVGLPAGDPHDPVLNVRAGVRYLRRLLDAFGREEVALMAYNAGPNRILGY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LREGAIPQRFHVYPRRVKAELRRIRRDIGDERPAEAVAAAAAPAPVAE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRLSGLLGAALAITAWVVVAAFPRTLSHEARTHGTGEPGCGASGCEPEADPLVEAIDAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
IAARMPGLADGDRTRLASTIVLEAEAARIDPLLVLALIEVESSFDARALSGAGAKGLMQL
HHHHCCCCCCCCHHHHHHHHHEEHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
RESTLRRELERVGLPAGDPHDPVLNVRAGVRYLRRLLDAFGREEVALMAYNAGPNRILGY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LREGAIPQRFHVYPRRVKAELRRIRRDIGDERPAEAVAAAAAPAPVAE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]