Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

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The map label for this gene is serB [C]

Identifier: 220917739

GI number: 220917739

Start: 2913158

End: 2913883

Strand: Direct

Name: serB [C]

Synonym: A2cp1_2640

Alternate gene names: 220917739

Gene position: 2913158-2913883 (Clockwise)

Preceding gene: 220917738

Following gene: 220917744

Centisome position: 57.92

GC content: 70.8

Gene sequence:

>726_bases
ATGGTCCCGTTCGGCCGCACGGCCGCCATCTTCGACGTCGACGACTCGCTCCTCGACGGCAACGCCGGGACCATCTTCAC
CTGGTACCTGTACAGCGAGCGCGTGATGCGGCCCGAGGTCCGGTCCCGCATCCCGCGCGTCATCTACGAGTACGCCCGCA
GCCGCCTCACCGAGCAGGACATGGTGGAGGTGGGCTCGCGCTGCCAGCAGGGCCTCTACGCCGACCAGGTGAAGGCGCAC
GCCCACGTCTGCTTCGAGCGCCACCTGCGCAAGCGCATCACCTCCGGCGCCATCCGGCAGATCCGCAAGCACCTGCTGTC
GGGGCACTTCGTGGTGATCGCCTCCGGCTCCTCGCAGTACATCATCGACGAGGTGGGCCGGCACCTCCGCGTGCACGCCG
CGGTGGGCACGCGCACGCGCATCGTCGACGGCCGCATCACCGACCAGATCCTGCCGCCGGTGGTGTTCAAGGACGGCAAG
CGCGCGGCGGTGGAGGCGATCGCCGAGCGGTTCGACCTCGACCTGACCCGCAGCTTCCTCTACTCCGACTCGAGCGCGGA
CGTGCCGCTGTTCGAGGCGGTCGGCACGCCGGTGGTGGTGAACCCCAAGGCGCCGTTCCGCGCCGCCGCCGAGAAGCGCG
GGTGGGAGATCGTCACCTGGAAGGAGCGCAACCGGCCCGGCGCCGAGCCCGACCTCGCCGACGAGTGGGGGAGCTGGGAG
GGCTGA

Upstream 100 bases:

>100_bases
CGAGGACAAGCCGGCGGGGTAGTTGTCGTAGAATCGCCTCCTCGCGCCCGGCGCGGCCGCGCGGCCGCCCGCCGGGCGCG
CGGGGGAGGCGCACCGGTCC

Downstream 100 bases:

>100_bases
CGGTGGGGCGGGGCCGGCCCGCCGCAGCTCAGGCGAGCCGGAACAGCCGCCGGGTGTTCTCGGCGGTTCGCGCGGCCACC
TCCTCGAGCGGCGCGCCCCA

Product: HAD superfamily hydrolase

Products: L-serine; D-serine; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MVPFGRTAAIFDVDDSLLDGNAGTIFTWYLYSERVMRPEVRSRIPRVIYEYARSRLTEQDMVEVGSRCQQGLYADQVKAH
AHVCFERHLRKRITSGAIRQIRKHLLSGHFVVIASGSSQYIIDEVGRHLRVHAAVGTRTRIVDGRITDQILPPVVFKDGK
RAAVEAIAERFDLDLTRSFLYSDSSADVPLFEAVGTPVVVNPKAPFRAAAEKRGWEIVTWKERNRPGAEPDLADEWGSWE
G

Sequences:

>Translated_241_residues
MVPFGRTAAIFDVDDSLLDGNAGTIFTWYLYSERVMRPEVRSRIPRVIYEYARSRLTEQDMVEVGSRCQQGLYADQVKAH
AHVCFERHLRKRITSGAIRQIRKHLLSGHFVVIASGSSQYIIDEVGRHLRVHAAVGTRTRIVDGRITDQILPPVVFKDGK
RAAVEAIAERFDLDLTRSFLYSDSSADVPLFEAVGTPVVVNPKAPFRAAAEKRGWEIVTWKERNRPGAEPDLADEWGSWE
G
>Mature_241_residues
MVPFGRTAAIFDVDDSLLDGNAGTIFTWYLYSERVMRPEVRSRIPRVIYEYARSRLTEQDMVEVGSRCQQGLYADQVKAH
AHVCFERHLRKRITSGAIRQIRKHLLSGHFVVIASGSSQYIIDEVGRHLRVHAAVGTRTRIVDGRITDQILPPVVFKDGK
RAAVEAIAERFDLDLTRSFLYSDSSADVPLFEAVGTPVVVNPKAPFRAAAEKRGWEIVTWKERNRPGAEPDLADEWGSWE
G

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.3

Molecular weight: Translated: 27221; Mature: 27221

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPFGRTAAIFDVDDSLLDGNAGTIFTWYLYSERVMRPEVRSRIPRVIYEYARSRLTEQD
CCCCCCEEEEEECCHHHCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH
MVEVGSRCQQGLYADQVKAHAHVCFERHLRKRITSGAIRQIRKHLLSGHFVVIASGSSQY
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH
IIDEVGRHLRVHAAVGTRTRIVDGRITDQILPPVVFKDGKRAAVEAIAERFDLDLTRSFL
HHHHHCCCEEEEEECCCCEEEECCCHHHHHCCCHHCCCCCHHHHHHHHHHHCHHHHHHHH
YSDSSADVPLFEAVGTPVVVNPKAPFRAAAEKRGWEIVTWKERNRPGAEPDLADEWGSWE
HCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCCC
G
C
>Mature Secondary Structure
MVPFGRTAAIFDVDDSLLDGNAGTIFTWYLYSERVMRPEVRSRIPRVIYEYARSRLTEQD
CCCCCCEEEEEECCHHHCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH
MVEVGSRCQQGLYADQVKAHAHVCFERHLRKRITSGAIRQIRKHLLSGHFVVIASGSSQY
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH
IIDEVGRHLRVHAAVGTRTRIVDGRITDQILPPVVFKDGKRAAVEAIAERFDLDLTRSFL
HHHHHCCCEEEEEECCCCEEEECCCHHHHHCCCHHCCCCCHHHHHHHHHHHCHHHHHHHH
YSDSSADVPLFEAVGTPVVVNPKAPFRAAAEKRGWEIVTWKERNRPGAEPDLADEWGSWE
HCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O

Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate

General reaction: phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]