Click here to switch to the map view.

The map label for this gene is 220917729

Identifier: 220917729

GI number: 220917729

Start: 2905392

End: 2906033

Strand: Reverse

Name: 220917729

Synonym: A2cp1_2630

Alternate gene names: NA

Gene position: 2906033-2905392 (Counterclockwise)

Preceding gene: 220917730

Following gene: 220917728

Centisome position: 57.78

GC content: 75.39

Gene sequence:

>642_bases
GTGCTCGCCTATCCGCTGGGCGACGCGCTCTACCTGAACGTCACGAGTGGCTGCACGCTCGCCTGCACGTTCTGCCCCAA
GATCCGCGACGACGACTTCACGGTGGGTGGATTCGACCTGCGGCTGGCGCGCAACCCGGACGCGGACGAGGTCTGGCGCG
CGATCCAGGCGGTGGGCCTGGAGGGCCGCTCGGAGGTCTGCTTCACCGGCTTCGGCGAGCCGACCCGCCGGCTCGAGGTG
GTGCTCGAGATCGCGCGGCGCCTCCGCGCGGCGGGCGCGCGCCGGATCCGGCTCGACACGGACGGGCTCGCGAACCTGCG
CGAGGGGCGCGACGTGGTCGCCGAGCTCGCGGCCGCCGGCGTGGGCGCCGTATCGGTGTCGCTGAACGCGCCGGACGCGG
CGGCCTACGCGCGCATCTGCCCGAGCCGCTACGGCGAGGCGGCGTACGACGCGGTGAAGGCGTTCCTCCGCGCCGCCGTC
GGCGTCATCCCCGACGTCGCCGCGAGCGCGGTGGCGATGCCGGGCGTCTCCGAGGCGGCCTGCAGGGCGGTCGCGGAATC
GCTCGGCGCGCGGTTCCGTTGGCGCCCGTACGACCGGGTGGGTCGCATCCCATCCTCGGCGGGGTCGGCCCGGGTGGGCT
GA

Upstream 100 bases:

>100_bases
ACGGTGACGCAGCAGGCCGCATCCGGGTGGCGCTCCCGCCTGGGTCCTGCTATTCACCCGGGCGCTCGTGACCACGGAAA
CCTCCCCCAGGAACGTGCCG

Downstream 100 bases:

>100_bases
AGGCCGGAAGGTCCGGGGGAGTAACGGGGTTTTTCAGGTGTCGGCCTCAGCACTTGGCCTCGGGTAGTCACTGGACCTCG
AGGCGAGAATGGTGCATAAC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Hydrolase TatD Family; TatD Family Hydrolase; Metallo Cofactor Biosynthesis Protein; Radical SAM-Superfamily Protein; Deoxyribonuclease TatD Family; Mg-Dependent DNAse; TatD Family Deoxyribonuclease; Radical SAM Superfamily Protein; Radical SAM Family Protein; Radical SAM; TatD-Related DeoxyribonucleaseRadical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLAYPLGDALYLNVTSGCTLACTFCPKIRDDDFTVGGFDLRLARNPDADEVWRAIQAVGLEGRSEVCFTGFGEPTRRLEV
VLEIARRLRAAGARRIRLDTDGLANLREGRDVVAELAAAGVGAVSVSLNAPDAAAYARICPSRYGEAAYDAVKAFLRAAV
GVIPDVAASAVAMPGVSEAACRAVAESLGARFRWRPYDRVGRIPSSAGSARVG

Sequences:

>Translated_213_residues
MLAYPLGDALYLNVTSGCTLACTFCPKIRDDDFTVGGFDLRLARNPDADEVWRAIQAVGLEGRSEVCFTGFGEPTRRLEV
VLEIARRLRAAGARRIRLDTDGLANLREGRDVVAELAAAGVGAVSVSLNAPDAAAYARICPSRYGEAAYDAVKAFLRAAV
GVIPDVAASAVAMPGVSEAACRAVAESLGARFRWRPYDRVGRIPSSAGSARVG
>Mature_213_residues
MLAYPLGDALYLNVTSGCTLACTFCPKIRDDDFTVGGFDLRLARNPDADEVWRAIQAVGLEGRSEVCFTGFGEPTRRLEV
VLEIARRLRAAGARRIRLDTDGLANLREGRDVVAELAAAGVGAVSVSLNAPDAAAYARICPSRYGEAAYDAVKAFLRAAV
GVIPDVAASAVAMPGVSEAACRAVAESLGARFRWRPYDRVGRIPSSAGSARVG

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.21.-

Molecular weight: Translated: 22519; Mature: 22519

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYPLGDALYLNVTSGCTLACTFCPKIRDDDFTVGGFDLRLARNPDADEVWRAIQAVGL
CCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHCC
EGRSEVCFTGFGEPTRRLEVVLEIARRLRAAGARRIRLDTDGLANLREGRDVVAELAAAG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
VGAVSVSLNAPDAAAYARICPSRYGEAAYDAVKAFLRAAVGVIPDVAASAVAMPGVSEAA
CCEEEEEECCCCHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CRAVAESLGARFRWRPYDRVGRIPSSAGSARVG
HHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLAYPLGDALYLNVTSGCTLACTFCPKIRDDDFTVGGFDLRLARNPDADEVWRAIQAVGL
CCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHCC
EGRSEVCFTGFGEPTRRLEVVLEIARRLRAAGARRIRLDTDGLANLREGRDVVAELAAAG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
VGAVSVSLNAPDAAAYARICPSRYGEAAYDAVKAFLRAAVGVIPDVAASAVAMPGVSEAA
CCEEEEEECCCCHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CRAVAESLGARFRWRPYDRVGRIPSSAGSARVG
HHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA