Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917627
Identifier: 220917627
GI number: 220917627
Start: 2794845
End: 2796137
Strand: Reverse
Name: 220917627
Synonym: A2cp1_2527
Alternate gene names: NA
Gene position: 2796137-2794845 (Counterclockwise)
Preceding gene: 220917628
Following gene: 220917626
Centisome position: 55.6
GC content: 75.17
Gene sequence:
>1293_bases GTGACCACCCCGCCCGCCGGCGCCGTCCCGGCCGATCCCGCGAAGCCGACGCCGCCCTGGATCTTCCTGTTCCTCGACTT CCCGTTCGGCGCGGCGGTCGGCTACCTCTCGCTGGGCGTGCCGTTCTGGATGGAGCGGCGCGGCTTCTCCATCGAGGCCA TCGCCGCGGTGGCGGCGGGCGCGAACCTGGCGCACGCGTTCAAGCTGCTGTGGATCCCGGTGCTCGACCTCGGCGCCTAC CGCAAGGTCTGGTACCTGGCCATGGCCGCCACCACCGCCGCGCTGCTGGCGGTGATCTCGGCGCTGCCGGATCCGCTCGC GAACCTGCCGCTGTTCGCGGCGCTGCTCACCGCGCTGCAGGCGGCGGCCACCACCGGCCACGCCGCCAACAACGCGCTCA TGGCGACGACCACCCGGTTCGCCGACAAGGGCAAGGTGGGGGGGTTCGCCATGGCCTCGAACGTCGGCAGCACCGGGCTG CTCGGCGCCGTGGCGATCCTGGTGTCGGACGCGGTCTCCCCGCGCGCGGCCGGGCTGACGCTGGCGGTCCTCGTGCTCGC CGGCGCCGCGTTCGCGCTGCGCATCGTCGAGCCGCGCCTGGTCGACCCGGCGGTCCGGGCGGCGCACGGGCTGGCCCGCG CCACGGTCCGGCACCTCGGGGCGATGCTGCGCGACCTCTGGTCCACCGTGCGGAGCCGCGAGGGCTTCACCGGCCTCGTC ATCTGCCTCGCGCCGGTCGGCTGCCAGGCGATGTCCAACCTGTTCACCGGCATCTCCGAGCAGTACGGCGCCAGCGCGCG GCTGGTGGGGATGGCGAACGGCGTCGGCGGCGGCATCGCCAGCGCGGTGGGGGCGCTGCTGGGCGGCGTCCTCGCCGACC GGATGAGCCGCCGGGTCGCCTACGCCGCGTCCGGCGGCCTGACCGCGCTCTGCGCCGTGGCGATGGCCGCCGCGCCGCTG AACGAGTGGACCTACGCCTGGGGCACGTTCACGTACCTGTTCGCGGGCGGGATCGCGTTCGCCACCTGGGCCGGGATGGT GCTCGAGATGGTGGGGCTCTCGGCCGCGACCGCCACGAAGTACGCGCTCTTCAACGCGTCGGCCAACCTCGCCATCAGCT ACGTCACCGCCGCCGACGGCCTCGGCGGCGCCTGGCTGCACCGGACGCTCGGCATCGCCGAGGCGCGCGGCGTGCTCCTC ACCGACGCGGCGCTCACGCTGGGCGGCATCGCGGTGCTGCTCGCGATGCTGCTGGTGACGCGCCGCCCCGCGCCCGCCGT GCGCCCCTCCTGA
Upstream 100 bases:
>100_bases GGACGTGGAGCTGCGCGAGCGGACCACCGCCCAGGTCGGCGCGTGGCTGGCGCGCGGCGGACGCTAGCGCGGCGGCCGCG AGCCGCTACAATCCGCCGCC
Downstream 100 bases:
>100_bases CCCGGATCGCCGGCGCGGCCCGCATCGGGGCCGGCGCGAGCCCTGTCGCGCGGCGCCGCCGTCCACAACGTGGTTCGGGG CCCCTCGCGCGCGCGGCGCC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTTPPAGAVPADPAKPTPPWIFLFLDFPFGAAVGYLSLGVPFWMERRGFSIEAIAAVAAGANLAHAFKLLWIPVLDLGAY RKVWYLAMAATTAALLAVISALPDPLANLPLFAALLTALQAAATTGHAANNALMATTTRFADKGKVGGFAMASNVGSTGL LGAVAILVSDAVSPRAAGLTLAVLVLAGAAFALRIVEPRLVDPAVRAAHGLARATVRHLGAMLRDLWSTVRSREGFTGLV ICLAPVGCQAMSNLFTGISEQYGASARLVGMANGVGGGIASAVGALLGGVLADRMSRRVAYAASGGLTALCAVAMAAAPL NEWTYAWGTFTYLFAGGIAFATWAGMVLEMVGLSAATATKYALFNASANLAISYVTAADGLGGAWLHRTLGIAEARGVLL TDAALTLGGIAVLLAMLLVTRRPAPAVRPS
Sequences:
>Translated_430_residues MTTPPAGAVPADPAKPTPPWIFLFLDFPFGAAVGYLSLGVPFWMERRGFSIEAIAAVAAGANLAHAFKLLWIPVLDLGAY RKVWYLAMAATTAALLAVISALPDPLANLPLFAALLTALQAAATTGHAANNALMATTTRFADKGKVGGFAMASNVGSTGL LGAVAILVSDAVSPRAAGLTLAVLVLAGAAFALRIVEPRLVDPAVRAAHGLARATVRHLGAMLRDLWSTVRSREGFTGLV ICLAPVGCQAMSNLFTGISEQYGASARLVGMANGVGGGIASAVGALLGGVLADRMSRRVAYAASGGLTALCAVAMAAAPL NEWTYAWGTFTYLFAGGIAFATWAGMVLEMVGLSAATATKYALFNASANLAISYVTAADGLGGAWLHRTLGIAEARGVLL TDAALTLGGIAVLLAMLLVTRRPAPAVRPS >Mature_429_residues TTPPAGAVPADPAKPTPPWIFLFLDFPFGAAVGYLSLGVPFWMERRGFSIEAIAAVAAGANLAHAFKLLWIPVLDLGAYR KVWYLAMAATTAALLAVISALPDPLANLPLFAALLTALQAAATTGHAANNALMATTTRFADKGKVGGFAMASNVGSTGLL GAVAILVSDAVSPRAAGLTLAVLVLAGAAFALRIVEPRLVDPAVRAAHGLARATVRHLGAMLRDLWSTVRSREGFTGLVI CLAPVGCQAMSNLFTGISEQYGASARLVGMANGVGGGIASAVGALLGGVLADRMSRRVAYAASGGLTALCAVAMAAAPLN EWTYAWGTFTYLFAGGIAFATWAGMVLEMVGLSAATATKYALFNASANLAISYVTAADGLGGAWLHRTLGIAEARGVLLT DAALTLGGIAVLLAMLLVTRRPAPAVRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43830; Mature: 43699
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPAGAVPADPAKPTPPWIFLFLDFPFGAAVGYLSLGVPFWMERRGFSIEAIAAVAAG CCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHC ANLAHAFKLLWIPVLDLGAYRKVWYLAMAATTAALLAVISALPDPLANLPLFAALLTALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AAATTGHAANNALMATTTRFADKGKVGGFAMASNVGSTGLLGAVAILVSDAVSPRAAGLT HHHHCCCCCCCCEEEEHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH LAVLVLAGAAFALRIVEPRLVDPAVRAAHGLARATVRHLGAMLRDLWSTVRSREGFTGLV HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE ICLAPVGCQAMSNLFTGISEQYGASARLVGMANGVGGGIASAVGALLGGVLADRMSRRVA EECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH YAASGGLTALCAVAMAAAPLNEWTYAWGTFTYLFAGGIAFATWAGMVLEMVGLSAATATK HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YALFNASANLAISYVTAADGLGGAWLHRTLGIAEARGVLLTDAALTLGGIAVLLAMLLVT HHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH RRPAPAVRPS CCCCCCCCCC >Mature Secondary Structure TTPPAGAVPADPAKPTPPWIFLFLDFPFGAAVGYLSLGVPFWMERRGFSIEAIAAVAAG CCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHC ANLAHAFKLLWIPVLDLGAYRKVWYLAMAATTAALLAVISALPDPLANLPLFAALLTALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AAATTGHAANNALMATTTRFADKGKVGGFAMASNVGSTGLLGAVAILVSDAVSPRAAGLT HHHHCCCCCCCCEEEEHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH LAVLVLAGAAFALRIVEPRLVDPAVRAAHGLARATVRHLGAMLRDLWSTVRSREGFTGLV HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE ICLAPVGCQAMSNLFTGISEQYGASARLVGMANGVGGGIASAVGALLGGVLADRMSRRVA EECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH YAASGGLTALCAVAMAAAPLNEWTYAWGTFTYLFAGGIAFATWAGMVLEMVGLSAATATK HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YALFNASANLAISYVTAADGLGGAWLHRTLGIAEARGVLLTDAALTLGGIAVLLAMLLVT HHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH RRPAPAVRPS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA