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The map label for this gene is ynfJ [C]

Identifier: 220917626

GI number: 220917626

Start: 2792916

End: 2794685

Strand: Reverse

Name: ynfJ [C]

Synonym: A2cp1_2526

Alternate gene names: 220917626

Gene position: 2794685-2792916 (Counterclockwise)

Preceding gene: 220917627

Following gene: 220917625

Centisome position: 55.57

GC content: 76.16

Gene sequence:

>1770_bases
GTGGAGCGGACGGGGTCACAGGACGCGAAGGCCCTGCCCACCGCGGCGCCGCCGGTCTTCTTCCGCTCGCTCCGGGACTT
CCTGCGCGTCCTGCCGGGCGCCGCGCAGCGGTTCTGGGTGCTGGTCATCGCGACGGGGGCGCTCTCCGGGCTGGGCTCGG
GCGCGCTGCTCCTGGCGCTCTCTGGCGTGCAGGAGCTCGCCTGGCCGCAGGCGGCGCGGTTCGTCGACTCGGTGGACGTC
TCGTCGCCCGGCCGGCGGGTGCTCGTCCCGGCGCTGGCCGGGCTGCTGGTCGGGGTCACCGCGCTGCTCTGGCGCAAGCC
GCTCGGCGGGCACGGCACGGCGCGCATCCTCGAGGCCATCTGGCATCGCGGCCGCGAGCTGTCGCTGGGCCGGACGCTCG
TGCGCGGGCTGCTCTCGATCACCTGCGTCGGCATGGGCGCGTCGCTGGGCCGGGAGGGCGCGCTCGTCCAGGCGGGCGCG
GCGAGCGGATCGTGGCTGGCCGGCCGGCTCGGGGTGAGCGAGCGCCAGGCCCGCGTGCTCGTCGCCTGCGGCGCCGCCTC
GGGCATCGCGGCCGCCTACGACGTGCCCATCGGCGGCGCGCTCTTCGGCCTGGAGGTGCTGCTGGGGAGCTTCGCCCTCG
AGCTGCTCGGGCCCATCGCCGTCGCCTGCGTGGTCGCCACCGCGGTGGCGCGCACGCTGCCGGTCCCGCACGCCACCTAC
GACATCCCCGAGTACGCGCTGCTCCACCCCGCCGAGCTGCTCCTCGGGCTCGCGCTCGCGCCGGTGCTCGGGCTCGCGTC
GGCCATCTACGTGCGGGTGATGGGCTGGGTCGAGGTGCGCTTCGATCGGTTCCCGGCGCGGCTGCGGCCGATGCTGCCGG
TCCTGGGCATGGGCGCGGTCGGGCTGCTCGCGATCCGGTTTCCGGCCGTGCTCGGCAACGGGTTCGACACGGTCCACCAG
GCGCTGCTCGGCGAGCTGCCGCTGCGCCTGCTGCTGGTGCTGCCGCTCCTGAAGCTCGCGGCGAGCGCGGTGTGCGCCGG
GACCGGGGTGCCCGGCGGGCTGTTCACCCCGTCGCTGTTCTTCGGGGCCGCCATCGGCGGCGCGGCCGGGGAGCTGCTGG
CGCGGGTGCTCCCAGGGGCGCCGCCCTCCGGCGCGCTCGCGCTGGTGGGCATGGCGGGCGTGCTGGCGGGCACCACGCAC
GCGGCGGTCTCCTCGGTGCTGATCGTGTTCGAGCTGACCGGCGACTACGGGGTGATCCTGCCGCTCATGCTCTCGGCCGC
GGTCGCCGCCGCCACCAGCCGCGCCATCGAGCCGGACTCGCTCTACACCGCGCCGCTGCGGCGCAGCGGGGTGGCGCTGC
CGGAGCTGCCGCGCCCGGAGTGGCTGCGCACCACGCCGGTGGCGGCGCTGGTGGAGCGCGACGCGGAGCGCGTCCCGCCC
ACGCTCGCGTTCGACGCGCTGGTGAAGAAGCTGCTGGCGCTGCCGCCCGGGCACGACCTGTACGTCACCGACGCGGAGGG
CGCGCTCCTCGGCGTCATCCGGCTCGACGCGCTGAAGGGCACCATCTCGGACCAGGCCGACCTGGGGATGATCGTCGCGG
CCGACGTGGTGGACCGCGAGATCGAGCCCATCACCACCGCCATGACGCTCGCGGAGGTCGCGGTGCGGTTCGGGGAGACC
GACCTCGAGCGCCTGCCGGTCGTGGACGGCCAGCGGAGGCTGGTGGGCGTGGTGGCCATGCGCGACCTGCTCGCCCGCGG
GAGCTTCTGA

Upstream 100 bases:

>100_bases
CGTCCACAACGTGGTTCGGGGCCCCTCGCGCGCGCGGCGCCGTCCGGCGGCCGGGCGGCCGCGCCGGGGTGGAGGACCGC
CGGGGCGGCGCGGGAGGCGC

Downstream 100 bases:

>100_bases
CCCCCTGGCGGGGATCCGAAGGTCGCCGGGTCCAGGTCGACCCGGCGCCGTCGTCACGGCGCGCGCGCCCGCCGCAGGTG
ACGTAACCGCGCGGAGCGGC

Product: Chloride channel core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MERTGSQDAKALPTAAPPVFFRSLRDFLRVLPGAAQRFWVLVIATGALSGLGSGALLLALSGVQELAWPQAARFVDSVDV
SSPGRRVLVPALAGLLVGVTALLWRKPLGGHGTARILEAIWHRGRELSLGRTLVRGLLSITCVGMGASLGREGALVQAGA
ASGSWLAGRLGVSERQARVLVACGAASGIAAAYDVPIGGALFGLEVLLGSFALELLGPIAVACVVATAVARTLPVPHATY
DIPEYALLHPAELLLGLALAPVLGLASAIYVRVMGWVEVRFDRFPARLRPMLPVLGMGAVGLLAIRFPAVLGNGFDTVHQ
ALLGELPLRLLLVLPLLKLAASAVCAGTGVPGGLFTPSLFFGAAIGGAAGELLARVLPGAPPSGALALVGMAGVLAGTTH
AAVSSVLIVFELTGDYGVILPLMLSAAVAAATSRAIEPDSLYTAPLRRSGVALPELPRPEWLRTTPVAALVERDAERVPP
TLAFDALVKKLLALPPGHDLYVTDAEGALLGVIRLDALKGTISDQADLGMIVAADVVDREIEPITTAMTLAEVAVRFGET
DLERLPVVDGQRRLVGVVAMRDLLARGSF

Sequences:

>Translated_589_residues
MERTGSQDAKALPTAAPPVFFRSLRDFLRVLPGAAQRFWVLVIATGALSGLGSGALLLALSGVQELAWPQAARFVDSVDV
SSPGRRVLVPALAGLLVGVTALLWRKPLGGHGTARILEAIWHRGRELSLGRTLVRGLLSITCVGMGASLGREGALVQAGA
ASGSWLAGRLGVSERQARVLVACGAASGIAAAYDVPIGGALFGLEVLLGSFALELLGPIAVACVVATAVARTLPVPHATY
DIPEYALLHPAELLLGLALAPVLGLASAIYVRVMGWVEVRFDRFPARLRPMLPVLGMGAVGLLAIRFPAVLGNGFDTVHQ
ALLGELPLRLLLVLPLLKLAASAVCAGTGVPGGLFTPSLFFGAAIGGAAGELLARVLPGAPPSGALALVGMAGVLAGTTH
AAVSSVLIVFELTGDYGVILPLMLSAAVAAATSRAIEPDSLYTAPLRRSGVALPELPRPEWLRTTPVAALVERDAERVPP
TLAFDALVKKLLALPPGHDLYVTDAEGALLGVIRLDALKGTISDQADLGMIVAADVVDREIEPITTAMTLAEVAVRFGET
DLERLPVVDGQRRLVGVVAMRDLLARGSF
>Mature_589_residues
MERTGSQDAKALPTAAPPVFFRSLRDFLRVLPGAAQRFWVLVIATGALSGLGSGALLLALSGVQELAWPQAARFVDSVDV
SSPGRRVLVPALAGLLVGVTALLWRKPLGGHGTARILEAIWHRGRELSLGRTLVRGLLSITCVGMGASLGREGALVQAGA
ASGSWLAGRLGVSERQARVLVACGAASGIAAAYDVPIGGALFGLEVLLGSFALELLGPIAVACVVATAVARTLPVPHATY
DIPEYALLHPAELLLGLALAPVLGLASAIYVRVMGWVEVRFDRFPARLRPMLPVLGMGAVGLLAIRFPAVLGNGFDTVHQ
ALLGELPLRLLLVLPLLKLAASAVCAGTGVPGGLFTPSLFFGAAIGGAAGELLARVLPGAPPSGALALVGMAGVLAGTTH
AAVSSVLIVFELTGDYGVILPLMLSAAVAAATSRAIEPDSLYTAPLRRSGVALPELPRPEWLRTTPVAALVERDAERVPP
TLAFDALVKKLLALPPGHDLYVTDAEGALLGVIRLDALKGTISDQADLGMIVAADVVDREIEPITTAMTLAEVAVRFGET
DLERLPVVDGQRRLVGVVAMRDLLARGSF

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Homo sapiens, GI156104869, Length=424, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI283806618, Length=423, Percent_Identity=27.8959810874704, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI283806622, Length=424, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI55770840, Length=416, Percent_Identity=27.4038461538462, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI55770838, Length=416, Percent_Identity=27.4038461538462, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI283806616, Length=415, Percent_Identity=27.710843373494, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI87081943, Length=414, Percent_Identity=34.5410628019324, Blast_Score=142, Evalue=6e-35,
Organism=Escherichia coli, GI1786350, Length=306, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322500, Length=335, Percent_Identity=25.6716417910448, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24665008, Length=390, Percent_Identity=27.9487179487179, Blast_Score=76, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 60899; Mature: 60899

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTGSQDAKALPTAAPPVFFRSLRDFLRVLPGAAQRFWVLVIATGALSGLGSGALLLAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEHHHHHCCCCCHHHHHH
SGVQELAWPQAARFVDSVDVSSPGRRVLVPALAGLLVGVTALLWRKPLGGHGTARILEAI
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
WHRGRELSLGRTLVRGLLSITCVGMGASLGREGALVQAGAASGSWLAGRLGVSERQARVL
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEHHCCCCCCCCEEE
VACGAASGIAAAYDVPIGGALFGLEVLLGSFALELLGPIAVACVVATAVARTLPVPHATY
EEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DIPEYALLHPAELLLGLALAPVLGLASAIYVRVMGWVEVRFDRFPARLRPMLPVLGMGAV
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
GLLAIRFPAVLGNGFDTVHQALLGELPLRLLLVLPLLKLAASAVCAGTGVPGGLFTPSLF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FGAAIGGAAGELLARVLPGAPPSGALALVGMAGVLAGTTHAAVSSVLIVFELTGDYGVIL
HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHEEEEEEECCCCHHHH
PLMLSAAVAAATSRAIEPDSLYTAPLRRSGVALPELPRPEWLRTTPVAALVERDAERVPP
HHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TLAFDALVKKLLALPPGHDLYVTDAEGALLGVIRLDALKGTISDQADLGMIVAADVVDRE
HHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEHHHHHCC
IEPITTAMTLAEVAVRFGETDLERLPVVDGQRRLVGVVAMRDLLARGSF
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERTGSQDAKALPTAAPPVFFRSLRDFLRVLPGAAQRFWVLVIATGALSGLGSGALLLAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEHHHHHCCCCCHHHHHH
SGVQELAWPQAARFVDSVDVSSPGRRVLVPALAGLLVGVTALLWRKPLGGHGTARILEAI
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
WHRGRELSLGRTLVRGLLSITCVGMGASLGREGALVQAGAASGSWLAGRLGVSERQARVL
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEHHCCCCCCCCEEE
VACGAASGIAAAYDVPIGGALFGLEVLLGSFALELLGPIAVACVVATAVARTLPVPHATY
EEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DIPEYALLHPAELLLGLALAPVLGLASAIYVRVMGWVEVRFDRFPARLRPMLPVLGMGAV
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
GLLAIRFPAVLGNGFDTVHQALLGELPLRLLLVLPLLKLAASAVCAGTGVPGGLFTPSLF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FGAAIGGAAGELLARVLPGAPPSGALALVGMAGVLAGTTHAAVSSVLIVFELTGDYGVIL
HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHEEEEEEECCCCHHHH
PLMLSAAVAAATSRAIEPDSLYTAPLRRSGVALPELPRPEWLRTTPVAALVERDAERVPP
HHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TLAFDALVKKLLALPPGHDLYVTDAEGALLGVIRLDALKGTISDQADLGMIVAADVVDRE
HHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEHHHHHCC
IEPITTAMTLAEVAVRFGETDLERLPVVDGQRRLVGVVAMRDLLARGSF
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]