Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is map [C]
Identifier: 220917585
GI number: 220917585
Start: 2746556
End: 2747305
Strand: Reverse
Name: map [C]
Synonym: A2cp1_2485
Alternate gene names: 220917585
Gene position: 2747305-2746556 (Counterclockwise)
Preceding gene: 220917587
Following gene: 220917584
Centisome position: 54.63
GC content: 74.0
Gene sequence:
>750_bases ATGGGCATTCCGCTCCTGGGTGGGCCGGCGGTCGAACGGATGAGGCAGGCGGGGAAGGCCGCGGCGGCGACGCTCGCGCA CGTCGGCGAGCGGCTCGCCGCGGGGATCAGCACCGCGGACATCGATCGCTGGGTGCGCGAGGACACGGCGCGCCGCGGCG GCACGCCGAGCCAGCTCGGCTTCCACGGCTTCCCCGCGGCGGTCTGCACGAGCCGGAACGAGGTCGTGTGCCACGGCATC CCGCGCGCCGCGGAGCGGCTGCGTCCCGGCGACATCGTCAACGTGGACGTCACCACGCGCCTGGATGGCTTCCACGGCGA CACCTCGGCCACGTTCTGCATCGGAGACGTCTCCGCCGACGCGCGGCACGTGGTGGACGTCGCCCGCCGCTGCCGGGATG CCGGCATCGCGGTGGTGCGGCACGGCGTCCGGCTCGGGGACGTCGGGGCAGCCATCGAGGAGGTCGCGCGCGCGGAAGGC TGCAGCGTGGTGCGCGACTACGGCGGGCACGGCATCGGGAAGGCGATGCACGGCCCGCCGACCGTGATGCACGTCGGTCC GAGGGGGCAGGGCGTGAGGCTGACGGCGGGGATGGCCATCACCATCGAGCCGATGGTGAACCTGGGCCGGCCGGAGGTGA GGCTGCTGGCCGACGGGTGGACCGTGGTCACCGCGGACGGAAGCCTCTCGGCGCAGTTCGAGCACACGGTGGTCGTGACG CGCGACGGCTGCGAGGTGATGACGGGGTGA
Upstream 100 bases:
>100_bases CAGGTCCCAGCGGCGGCCTGGCCTCGGAGGCCCGCGAGCGGCCTCCCGGATACCGAGACGGTATTGGATCGCCGCTGCGC CGCGCTGGCAGGCTGCAGGC
Downstream 100 bases:
>100_bases GCCTGCGCCAGCGCGCGGGATCCCCTCTCGCGGGGAGGCGTCCCCACTCCAAGCGGTGAGACCGGGGGGCCGATCGTCGC CCTGGCGGCGCGCCGGCGCC
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MGIPLLGGPAVERMRQAGKAAAATLAHVGERLAAGISTADIDRWVREDTARRGGTPSQLGFHGFPAAVCTSRNEVVCHGI PRAAERLRPGDIVNVDVTTRLDGFHGDTSATFCIGDVSADARHVVDVARRCRDAGIAVVRHGVRLGDVGAAIEEVARAEG CSVVRDYGGHGIGKAMHGPPTVMHVGPRGQGVRLTAGMAITIEPMVNLGRPEVRLLADGWTVVTADGSLSAQFEHTVVVT RDGCEVMTG
Sequences:
>Translated_249_residues MGIPLLGGPAVERMRQAGKAAAATLAHVGERLAAGISTADIDRWVREDTARRGGTPSQLGFHGFPAAVCTSRNEVVCHGI PRAAERLRPGDIVNVDVTTRLDGFHGDTSATFCIGDVSADARHVVDVARRCRDAGIAVVRHGVRLGDVGAAIEEVARAEG CSVVRDYGGHGIGKAMHGPPTVMHVGPRGQGVRLTAGMAITIEPMVNLGRPEVRLLADGWTVVTADGSLSAQFEHTVVVT RDGCEVMTG >Mature_248_residues GIPLLGGPAVERMRQAGKAAAATLAHVGERLAAGISTADIDRWVREDTARRGGTPSQLGFHGFPAAVCTSRNEVVCHGIP RAAERLRPGDIVNVDVTTRLDGFHGDTSATFCIGDVSADARHVVDVARRCRDAGIAVVRHGVRLGDVGAAIEEVARAEGC SVVRDYGGHGIGKAMHGPPTVMHVGPRGQGVRLTAGMAITIEPMVNLGRPEVRLLADGWTVVTADGSLSAQFEHTVVVTR DGCEVMTG
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI40385867, Length=238, Percent_Identity=41.5966386554622, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI164420681, Length=246, Percent_Identity=41.869918699187, Blast_Score=186, Evalue=1e-47, Organism=Escherichia coli, GI1786364, Length=249, Percent_Identity=45.7831325301205, Blast_Score=229, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71996291, Length=247, Percent_Identity=41.7004048582996, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6323273, Length=250, Percent_Identity=38, Blast_Score=191, Evalue=1e-49, Organism=Drosophila melanogaster, GI24583427, Length=249, Percent_Identity=37.7510040160643, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI21355531, Length=246, Percent_Identity=39.8373983739837, Blast_Score=186, Evalue=1e-47,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 26021; Mature: 25890
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPLLGGPAVERMRQAGKAAAATLAHVGERLAAGISTADIDRWVREDTARRGGTPSQLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC FHGFPAAVCTSRNEVVCHGIPRAAERLRPGDIVNVDVTTRLDGFHGDTSATFCIGDVSAD CCCCCHHHHCCCCCEEEECCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCC ARHVVDVARRCRDAGIAVVRHGVRLGDVGAAIEEVARAEGCSVVRDYGGHGIGKAMHGPP HHHHHHHHHHHHHCCCHHHHCCCEECHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC TVMHVGPRGQGVRLTAGMAITIEPMVNLGRPEVRLLADGWTVVTADGSLSAQFEHTVVVT CEEEECCCCCCEEEECCEEEEEEHHHCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEE RDGCEVMTG ECCCEECCC >Mature Secondary Structure GIPLLGGPAVERMRQAGKAAAATLAHVGERLAAGISTADIDRWVREDTARRGGTPSQLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC FHGFPAAVCTSRNEVVCHGIPRAAERLRPGDIVNVDVTTRLDGFHGDTSATFCIGDVSAD CCCCCHHHHCCCCCEEEECCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCC ARHVVDVARRCRDAGIAVVRHGVRLGDVGAAIEEVARAEGCSVVRDYGGHGIGKAMHGPP HHHHHHHHHHHHHCCCHHHHCCCEECHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC TVMHVGPRGQGVRLTAGMAITIEPMVNLGRPEVRLLADGWTVVTADGSLSAQFEHTVVVT CEEEECCCCCCEEEECCEEEEEEHHHCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEE RDGCEVMTG ECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]