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The map label for this gene is fdoI [C]

Identifier: 220917066

GI number: 220917066

Start: 2216117

End: 2216842

Strand: Direct

Name: fdoI [C]

Synonym: A2cp1_1962

Alternate gene names: 220917066

Gene position: 2216117-2216842 (Clockwise)

Preceding gene: 220917065

Following gene: 220917067

Centisome position: 44.06

GC content: 65.29

Gene sequence:

>726_bases
ATGAGCGCTTACATCGTCCGCTTCAACCTGCAGCAGCGGATCGAGCACTTCATCACGATGCTCGTGTTCGTGCTGCTCTG
CCTCACCGGCCTGCCGCAGAAGTTCTACACGGCCGGCTGGTCGCAGGCGGTGGTCGGCGTGTTCGGCGGCATCGACGTGG
CGCGCTGGGTCCACCGCGTGTGCGGCCTGATCCTGGCGGCGTCCACGGTGATCCACTTCGCGAACGCGATCGCCGCGATG
CTCTCGAAGAAGATCGGCTTCACGATGGTGCCGTCGAAGAAGGACTTCGAGGACGCCATCCTCCAGCTCAAGTACTACCT
GGGCGTGACCGACAAGCACCCGATGTACGATCGGTACACGTACAAGGAGAAGTTCGAGTACTGGGGCCTGGTGTTCGGCA
ACGTCATCATGGTGCTCACCGGCTTCATCCTGTTCTTCCCGGTGACCGTCGCGTCGCTGCTCCCGGGCGAGGTGATCCCC
GCCGCCAAGGTGGCCCACTCGAACGAGGGCCTGATGGCGTTCCTGGTGATCACCATCTGGCACGTGTTCAACGCGCACCT
GAGCCCCGACGTGTTCCCGTTCGACACGTCGATGTTCACCGGCAAGGTCAGCCGCGAGCGCTACGAGCACGAGCACCCGC
TCGAGCTCGCGCGCATCGAGGGGCGGGCGCCGCCCGCGGAGCACGGCGGCCACGCCTCGTCGCATGACGAGCGCCACGTG
GGCTGA

Upstream 100 bases:

>100_bases
TGTGGGGCGTGCAGGTCTTCTACAAGATGCTGATCCCGTTCATGGTGGGCGGGCTCGTGCTCCAGATCGCGCTGCACCTC
TGGCGCGTGGTGGTGAACCG

Downstream 100 bases:

>100_bases
CGTCCTCGCGCAGGCCATCTTCCACACCCTGGTCGCCTCGCTGTTCGTGGAGGCGCTGGTGCGGACCTGGCGAGTGCGCG
ACCCCGGCCAGCGGATCGCC

Product: deca-heme C-type cytochrome-like protein

Products: CO2; NADH2 [C]

Alternate protein names: Cytochrome B Subunit Of Formate Dehydrogenase-Like Protein; Deca-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome-Like Protein; Cytochrome B/B6 Domain; Cytochrome B Subunit Of Formate Dehydrogenase-Like; FfdnI Cytochromesubunit B Of Formate Dehydrogenase; Deca-Heme C-Type Cytochrome-Like; Cytochrome C

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSAYIVRFNLQQRIEHFITMLVFVLLCLTGLPQKFYTAGWSQAVVGVFGGIDVARWVHRVCGLILAASTVIHFANAIAAM
LSKKIGFTMVPSKKDFEDAILQLKYYLGVTDKHPMYDRYTYKEKFEYWGLVFGNVIMVLTGFILFFPVTVASLLPGEVIP
AAKVAHSNEGLMAFLVITIWHVFNAHLSPDVFPFDTSMFTGKVSRERYEHEHPLELARIEGRAPPAEHGGHASSHDERHV
G

Sequences:

>Translated_241_residues
MSAYIVRFNLQQRIEHFITMLVFVLLCLTGLPQKFYTAGWSQAVVGVFGGIDVARWVHRVCGLILAASTVIHFANAIAAM
LSKKIGFTMVPSKKDFEDAILQLKYYLGVTDKHPMYDRYTYKEKFEYWGLVFGNVIMVLTGFILFFPVTVASLLPGEVIP
AAKVAHSNEGLMAFLVITIWHVFNAHLSPDVFPFDTSMFTGKVSRERYEHEHPLELARIEGRAPPAEHGGHASSHDERHV
G
>Mature_240_residues
SAYIVRFNLQQRIEHFITMLVFVLLCLTGLPQKFYTAGWSQAVVGVFGGIDVARWVHRVCGLILAASTVIHFANAIAAML
SKKIGFTMVPSKKDFEDAILQLKYYLGVTDKHPMYDRYTYKEKFEYWGLVFGNVIMVLTGFILFFPVTVASLLPGEVIPA
AKVAHSNEGLMAFLVITIWHVFNAHLSPDVFPFDTSMFTGKVSRERYEHEHPLELARIEGRAPPAEHGGHASSHDERHVG

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27114; Mature: 26983

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYIVRFNLQQRIEHFITMLVFVLLCLTGLPQKFYTAGWSQAVVGVFGGIDVARWVHRV
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHH
CGLILAASTVIHFANAIAAMLSKKIGFTMVPSKKDFEDAILQLKYYLGVTDKHPMYDRYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
YKEKFEYWGLVFGNVIMVLTGFILFFPVTVASLLPGEVIPAAKVAHSNEGLMAFLVITIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHH
HVFNAHLSPDVFPFDTSMFTGKVSRERYEHEHPLELARIEGRAPPAEHGGHASSHDERHV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
G
C
>Mature Secondary Structure 
SAYIVRFNLQQRIEHFITMLVFVLLCLTGLPQKFYTAGWSQAVVGVFGGIDVARWVHRV
CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHH
CGLILAASTVIHFANAIAAMLSKKIGFTMVPSKKDFEDAILQLKYYLGVTDKHPMYDRYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
YKEKFEYWGLVFGNVIMVLTGFILFFPVTVASLLPGEVIPAAKVAHSNEGLMAFLVITIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHH
HVFNAHLSPDVFPFDTSMFTGKVSRERYEHEHPLELARIEGRAPPAEHGGHASSHDERHV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD [C]

Specific reaction: formate + NAD = CO2 + NADH2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA