| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917020
Identifier: 220917020
GI number: 220917020
Start: 2155011
End: 2157449
Strand: Direct
Name: 220917020
Synonym: A2cp1_1916
Alternate gene names: NA
Gene position: 2155011-2157449 (Clockwise)
Preceding gene: 220917018
Following gene: 220917023
Centisome position: 42.85
GC content: 76.22
Gene sequence:
>2439_bases ATGTCCCGCCGCCTGCTCTGCCTCCACGGGCACTTCTACCAGCCGCCGCGCGAGAACCCCTGGATCGAGGCCATCGAGGT GCAGGACTCGGCCGACCCGTTCCACGACTGGAACGAGCGGATCGCGGTGGAGTGCTACGCGCCGAACGGCGCCGCGCGCC TGAAGGACGGGCGCGGGCGGATCCTCGACATCGTCGACAGCTACCTCCACCTCTCGTTCAACTTCGGCCCCACGCTGCTC GCCTGGCTGGAGCGCCACCGGCCCGACGCCTACGCGCGCGTCCTCGACGCCGACGCGCGCAGCCTGGAGCTGCGCGGCCA CGGCAACGCGCTCGCACAGGGCTACAACCACGCCATCCTGCCGCTCGCCTCGCCCCGCGACCGGCTCACGCAGATCCGCT GGGGCCTGGCCGACTTCCGGCGCCGGTTCCACCGCGAGCCGGAGGGCTTCTGGCTGCCCGAGACCGCCGCCGACGCGGCG ACGCTGGAGGCGCTGGCGGGCGAGGGCCTCCGGTACACCATCCTCTCGCCGTACCAGGCGGTGCGGATCCGGGCGCCCGG CGGCGAGTGGGTCGACGCCACCGGCGCGCGCTTCGACCCGACGCGGCCGTACCGCGTGCGCGCCGGCGCCCGCGAGCTCA CCGTGTTCTTCTACGACGGCCACATCGCGCGCGACCTGGCGTTCGGGGACGCGCTCGGCTCCGCCGCGGCGCTCCTCGAC CGGCTGCAGGCCGGGTTCGACCCGGGGCGCGAGCACGACGAGCTGCTCACGGTGGCGGTGGACGGCGAGACGCTCGGCCA CCACAAGAAGGGCGCCGACGAGGTGCTGGCCGGGGCGCTGCGCGAGCTGGCGCGTCGGCCGGGCGTGGAGCTGGTGAACC TGGGCCAGGCGCTGGACTGGATCCCGGTGGAGTGGGAGGCGGAGATCGCCGAGGGATCGTCCTGGAGCTGCGCGCACGGG GTGGAGCGCTGGCGCTCGGACTGCGGGTGCAGCGCGGGCGGCGCGGAGGGCTGGACGCAGGCCTGGCGCGCGCCGCTGCG GAACGCGCTGGACGGGCTGCGCGGGCAGCTCGACGCCGTCTACGAGCGCGAGGCGGCGGGGCTGCTGCCGGACCCGTGGC GGACGCGCGACCGCTACGCCGAGGTGCTGGTGGACCCGGAGCGCCGGGACGCCCCGGACTTCGTTCGGCGCGAGGCGGGG CGGGCGCTCTCGGCGGAGGAGTCGGTCCGCGCGCTCCAGCTGCTGGAGATGCAGCGGCAGGGGCAGCTCATGTTCACGAG CTGCGGCTGGTTCTTCTCCGAGCTGTCGGGGATCGAGACGGTGCAGGTGCTCCGGTACGCGGCGCGCGCGGTGCAGCTCG CCCGCGAGGTCGCCGGCGTGGACCTGCAGCCCGGGCTGGAGCGCGCGCTCGCGGCCGCGCCCTCGAACGACCCGGCGCTG GCGAACGGGCGCGAGGTGTTCCGGCGGCTGGTGGAGCCGAGCGTGGTGTCGCTGGAGGGCGTGGGCGCCCACCTCGCGAT CGCCGCGTCGGTGCGGCCGGTGCCGGACGCGGGCTGGGTGTTCTGCTACGCGTACCGGGTCGAGGGGCGGCGGGCCGCGG CGGCCGGCCCGGTCGCGGTGGCGCTGTGCCGGCTGCAGCTCGAGAGCGCGCTCACCCGCGAGACCCTCGACGCCGTCGCC TGCGTGCTCCACTTCGGCGCGGCCGACTTCCGCTGCGGGCTGGCGCCGTACCGCGGGCCGGAGCAGCTCGCCGAGCTGGA GGAGGCGCTGCTGGCCCGGTCGCCGGCGCAGTCGCTGGCGCAGCTGCTGCGTTCGGTGGACCGCTTCTTCCCCGGGCGCG ACTACGGCCTGCGCGACCTGTTCCTGGACGAGCGCCGCCGCGTGGCGGGCACGCTGCTGGAAGGGACGCTGCGCCGGTAC GAGGACGGCTACCGCGAGATCTTCGAGGACAACCGGCGCCTGATGGAGTTCCTGCGCGAGATCGACTCGCCGGTCCCCGG GCCGCTGCGGGTCACCGCCGACGTGACGCTGACCGCCCGCGTGCTCCGCGTCACCGGCGCGGCGCGGAGGGGGGAGGTGG ACCTCGCCGCCGCCGAGGTGGAGCTGGGGGCCACCGTGGAGCTCGCCCGCCGGCTGGGGGCGCACCTGCACATCGACGCC GTCCGGCGCGACGTGGAGCAGCTCGTGGAGGACCGGGTGGCGGCGCTGGTGGCGGGGCAGGCGCCGGCGGCGCGGGCGGC GGAGCTCGCCGGGATCCTGAGCCTGGCCGAGCGGCTGGGCCTGCGGCTCGACCTGTGGAACGCGCAGAACCGGGTCTGGG CCTGGGCCGGCTCGGCCATGGTCACCCTGGACCGGGAGGCGACCGCGGAGCTGGCCCGGAGGCTCTGGTTCGACGAGGCG ATGCTGCTGGCGCGCGCCGGGTTCGCGACGCCCGCCTGA
Upstream 100 bases:
>100_bases GCCCGCGCGCGGGGGGGCCGAACGAGGGGCCGGCGCAGGAGCGGAACGGCCCCGACGAGCAGTCGCGCCGCGCCGGGGCG CGCCTACCATGGTCGGACCC
Downstream 100 bases:
>100_bases CCCCGGAAGCATCTCCCCCCGACCCAGAGTCGTCCGCGGAACCGCGTTCCGGCGCGGGGGCGCGTCAAGGCTGCCCGGCG CAAGTGCTCGCAGCGCCGGC
Product: glycoside hydrolase family 57
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MSRRLLCLHGHFYQPPRENPWIEAIEVQDSADPFHDWNERIAVECYAPNGAARLKDGRGRILDIVDSYLHLSFNFGPTLL AWLERHRPDAYARVLDADARSLELRGHGNALAQGYNHAILPLASPRDRLTQIRWGLADFRRRFHREPEGFWLPETAADAA TLEALAGEGLRYTILSPYQAVRIRAPGGEWVDATGARFDPTRPYRVRAGARELTVFFYDGHIARDLAFGDALGSAAALLD RLQAGFDPGREHDELLTVAVDGETLGHHKKGADEVLAGALRELARRPGVELVNLGQALDWIPVEWEAEIAEGSSWSCAHG VERWRSDCGCSAGGAEGWTQAWRAPLRNALDGLRGQLDAVYEREAAGLLPDPWRTRDRYAEVLVDPERRDAPDFVRREAG RALSAEESVRALQLLEMQRQGQLMFTSCGWFFSELSGIETVQVLRYAARAVQLAREVAGVDLQPGLERALAAAPSNDPAL ANGREVFRRLVEPSVVSLEGVGAHLAIAASVRPVPDAGWVFCYAYRVEGRRAAAAGPVAVALCRLQLESALTRETLDAVA CVLHFGAADFRCGLAPYRGPEQLAELEEALLARSPAQSLAQLLRSVDRFFPGRDYGLRDLFLDERRRVAGTLLEGTLRRY EDGYREIFEDNRRLMEFLREIDSPVPGPLRVTADVTLTARVLRVTGAARRGEVDLAAAEVELGATVELARRLGAHLHIDA VRRDVEQLVEDRVAALVAGQAPAARAAELAGILSLAERLGLRLDLWNAQNRVWAWAGSAMVTLDREATAELARRLWFDEA MLLARAGFATPA
Sequences:
>Translated_812_residues MSRRLLCLHGHFYQPPRENPWIEAIEVQDSADPFHDWNERIAVECYAPNGAARLKDGRGRILDIVDSYLHLSFNFGPTLL AWLERHRPDAYARVLDADARSLELRGHGNALAQGYNHAILPLASPRDRLTQIRWGLADFRRRFHREPEGFWLPETAADAA TLEALAGEGLRYTILSPYQAVRIRAPGGEWVDATGARFDPTRPYRVRAGARELTVFFYDGHIARDLAFGDALGSAAALLD RLQAGFDPGREHDELLTVAVDGETLGHHKKGADEVLAGALRELARRPGVELVNLGQALDWIPVEWEAEIAEGSSWSCAHG VERWRSDCGCSAGGAEGWTQAWRAPLRNALDGLRGQLDAVYEREAAGLLPDPWRTRDRYAEVLVDPERRDAPDFVRREAG RALSAEESVRALQLLEMQRQGQLMFTSCGWFFSELSGIETVQVLRYAARAVQLAREVAGVDLQPGLERALAAAPSNDPAL ANGREVFRRLVEPSVVSLEGVGAHLAIAASVRPVPDAGWVFCYAYRVEGRRAAAAGPVAVALCRLQLESALTRETLDAVA CVLHFGAADFRCGLAPYRGPEQLAELEEALLARSPAQSLAQLLRSVDRFFPGRDYGLRDLFLDERRRVAGTLLEGTLRRY EDGYREIFEDNRRLMEFLREIDSPVPGPLRVTADVTLTARVLRVTGAARRGEVDLAAAEVELGATVELARRLGAHLHIDA VRRDVEQLVEDRVAALVAGQAPAARAAELAGILSLAERLGLRLDLWNAQNRVWAWAGSAMVTLDREATAELARRLWFDEA MLLARAGFATPA >Mature_811_residues SRRLLCLHGHFYQPPRENPWIEAIEVQDSADPFHDWNERIAVECYAPNGAARLKDGRGRILDIVDSYLHLSFNFGPTLLA WLERHRPDAYARVLDADARSLELRGHGNALAQGYNHAILPLASPRDRLTQIRWGLADFRRRFHREPEGFWLPETAADAAT LEALAGEGLRYTILSPYQAVRIRAPGGEWVDATGARFDPTRPYRVRAGARELTVFFYDGHIARDLAFGDALGSAAALLDR LQAGFDPGREHDELLTVAVDGETLGHHKKGADEVLAGALRELARRPGVELVNLGQALDWIPVEWEAEIAEGSSWSCAHGV ERWRSDCGCSAGGAEGWTQAWRAPLRNALDGLRGQLDAVYEREAAGLLPDPWRTRDRYAEVLVDPERRDAPDFVRREAGR ALSAEESVRALQLLEMQRQGQLMFTSCGWFFSELSGIETVQVLRYAARAVQLAREVAGVDLQPGLERALAAAPSNDPALA NGREVFRRLVEPSVVSLEGVGAHLAIAASVRPVPDAGWVFCYAYRVEGRRAAAAGPVAVALCRLQLESALTRETLDAVAC VLHFGAADFRCGLAPYRGPEQLAELEEALLARSPAQSLAQLLRSVDRFFPGRDYGLRDLFLDERRRVAGTLLEGTLRRYE DGYREIFEDNRRLMEFLREIDSPVPGPLRVTADVTLTARVLRVTGAARRGEVDLAAAEVELGATVELARRLGAHLHIDAV RRDVEQLVEDRVAALVAGQAPAARAAELAGILSLAERLGLRLDLWNAQNRVWAWAGSAMVTLDREATAELARRLWFDEAM LLARAGFATPA
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89738; Mature: 89607
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLLCLHGHFYQPPRENPWIEAIEVQDSADPFHDWNERIAVECYAPNGAARLKDGRGR CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCH ILDIVDSYLHLSFNFGPTLLAWLERHRPDAYARVLDADARSLELRGHGNALAQGYNHAIL HHHHHHHHHEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEE PLASPRDRLTQIRWGLADFRRRFHREPEGFWLPETAADAATLEALAGEGLRYTILSPYQA ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEE VRIRAPGGEWVDATGARFDPTRPYRVRAGARELTVFFYDGHIARDLAFGDALGSAAALLD EEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH RLQAGFDPGREHDELLTVAVDGETLGHHKKGADEVLAGALRELARRPGVELVNLGQALDW HHHCCCCCCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC IPVEWEAEIAEGSSWSCAHGVERWRSDCGCSAGGAEGWTQAWRAPLRNALDGLRGQLDAV CCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEREAAGLLPDPWRTRDRYAEVLVDPERRDAPDFVRREAGRALSAEESVRALQLLEMQRQ HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GQLMFTSCGWFFSELSGIETVQVLRYAARAVQLAREVAGVDLQPGLERALAAAPSNDPAL CCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC ANGREVFRRLVEPSVVSLEGVGAHLAIAASVRPVPDAGWVFCYAYRVEGRRAAAAGPVAV CCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHH ALCRLQLESALTRETLDAVACVLHFGAADFRCGLAPYRGPEQLAELEEALLARSPAQSLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH QLLRSVDRFFPGRDYGLRDLFLDERRRVAGTLLEGTLRRYEDGYREIFEDNRRLMEFLRE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IDSPVPGPLRVTADVTLTARVLRVTGAARRGEVDLAAAEVELGATVELARRLGAHLHIDA HCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCEEEEEHEECCHHHHHHHHHCCCEEHHH VRRDVEQLVEDRVAALVAGQAPAARAAELAGILSLAERLGLRLDLWNAQNRVWAWAGSAM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCEE VTLDREATAELARRLWFDEAMLLARAGFATPA EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRRLLCLHGHFYQPPRENPWIEAIEVQDSADPFHDWNERIAVECYAPNGAARLKDGRGR CCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCH ILDIVDSYLHLSFNFGPTLLAWLERHRPDAYARVLDADARSLELRGHGNALAQGYNHAIL HHHHHHHHHEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEE PLASPRDRLTQIRWGLADFRRRFHREPEGFWLPETAADAATLEALAGEGLRYTILSPYQA ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEE VRIRAPGGEWVDATGARFDPTRPYRVRAGARELTVFFYDGHIARDLAFGDALGSAAALLD EEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH RLQAGFDPGREHDELLTVAVDGETLGHHKKGADEVLAGALRELARRPGVELVNLGQALDW HHHCCCCCCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC IPVEWEAEIAEGSSWSCAHGVERWRSDCGCSAGGAEGWTQAWRAPLRNALDGLRGQLDAV CCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEREAAGLLPDPWRTRDRYAEVLVDPERRDAPDFVRREAGRALSAEESVRALQLLEMQRQ HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GQLMFTSCGWFFSELSGIETVQVLRYAARAVQLAREVAGVDLQPGLERALAAAPSNDPAL CCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC ANGREVFRRLVEPSVVSLEGVGAHLAIAASVRPVPDAGWVFCYAYRVEGRRAAAAGPVAV CCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHH ALCRLQLESALTRETLDAVACVLHFGAADFRCGLAPYRGPEQLAELEEALLARSPAQSLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH QLLRSVDRFFPGRDYGLRDLFLDERRRVAGTLLEGTLRRYEDGYREIFEDNRRLMEFLRE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IDSPVPGPLRVTADVTLTARVLRVTGAARRGEVDLAAAEVELGATVELARRLGAHLHIDA HCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCEEEEEHEECCHHHHHHHHHCCCEEHHH VRRDVEQLVEDRVAALVAGQAPAARAAELAGILSLAERLGLRLDLWNAQNRVWAWAGSAM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCEE VTLDREATAELARRLWFDEAMLLARAGFATPA EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA