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The map label for this gene is 220916940

Identifier: 220916940

GI number: 220916940

Start: 2055182

End: 2055766

Strand: Direct

Name: 220916940

Synonym: A2cp1_1836

Alternate gene names: NA

Gene position: 2055182-2055766 (Clockwise)

Preceding gene: 220916939

Following gene: 220916942

Centisome position: 40.86

GC content: 73.68

Gene sequence:

>585_bases
ATGGACGTCGAGTCCAGGGTCTCCGCGGCGCTGGAGGCGGGCGATCACCGCCTCGCCGCGACCGAGATCATCCGCGGCTA
CGGCCCGCGGATCCTGGGCTACCTGAACGTCCTGCTCCGCGACGAGACCGCCGCCTCCGACGCGTTCGCGCTGTTCGCCG
AGCAGGTGTGGCGCGGCATGCCGGGCTTCCAGCGCCGCTCCAGCGCCCGGACCTGGGCGTTCAAGGCCGCCTGGAGCGCC
GCCATGAAGGTGCGCGACGACGCCTGGCGGCGGCTGGGGCAGCGGCTCGACACCACCGAGGCCACCCGCCTCGCCGCCGA
CGTGCGCACCCGCACCGCGGTCCGCCTCGAGCGCCAGCGGCAGGAGCTGGAGGAGCTGCGCGCGATGCTGGACGACGAGG
AGCAGACGCTGCTCGTGCTCCGGCTCGACCAGCAGCTCTCCTGGGACGAGGTCGCGGAGGTGCTGTCGCAGGAGGGGAAG
CGCGTGGACCCGGCCACGCTGCGCAAGCGCTACGAGCGCATCAAGGACCGCCTCGCCGAGATCATCCGGCGGCGCGCGGT
CGAGGGCAGCCGGGAAGAGTCCTGA

Upstream 100 bases:

>100_bases
CAGCCGATCACCGCCGCGCTCGCCCGGCTGCTGGCGGGCCGGCGCTGACCTACACCGCTCCATCTCGACCACCGCCGCGC
GCTCGTCTAGATTGCCGCGC

Downstream 100 bases:

>100_bases
CGGGCGCCCCTTTCATGGTAAACGTTCTATTGCGCTGAAATGGTGAGTGGTTTCCCCGGGCCGCGCGAGACCCGCGCCCG
AGGCGTCACACGCCGCGGGC

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: Sigma-; RNA Polymerase Sigma-24 Subunit

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDVESRVSAALEAGDHRLAATEIIRGYGPRILGYLNVLLRDETAASDAFALFAEQVWRGMPGFQRRSSARTWAFKAAWSA
AMKVRDDAWRRLGQRLDTTEATRLAADVRTRTAVRLERQRQELEELRAMLDDEEQTLLVLRLDQQLSWDEVAEVLSQEGK
RVDPATLRKRYERIKDRLAEIIRRRAVEGSREES

Sequences:

>Translated_194_residues
MDVESRVSAALEAGDHRLAATEIIRGYGPRILGYLNVLLRDETAASDAFALFAEQVWRGMPGFQRRSSARTWAFKAAWSA
AMKVRDDAWRRLGQRLDTTEATRLAADVRTRTAVRLERQRQELEELRAMLDDEEQTLLVLRLDQQLSWDEVAEVLSQEGK
RVDPATLRKRYERIKDRLAEIIRRRAVEGSREES
>Mature_194_residues
MDVESRVSAALEAGDHRLAATEIIRGYGPRILGYLNVLLRDETAASDAFALFAEQVWRGMPGFQRRSSARTWAFKAAWSA
AMKVRDDAWRRLGQRLDTTEATRLAADVRTRTAVRLERQRQELEELRAMLDDEEQTLLVLRLDQQLSWDEVAEVLSQEGK
RVDPATLRKRYERIKDRLAEIIRRRAVEGSREES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22370; Mature: 22370

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVESRVSAALEAGDHRLAATEIIRGYGPRILGYLNVLLRDETAASDAFALFAEQVWRGM
CCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PGFQRRSSARTWAFKAAWSAAMKVRDDAWRRLGQRLDTTEATRLAADVRTRTAVRLERQR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QELEELRAMLDDEEQTLLVLRLDQQLSWDEVAEVLSQEGKRVDPATLRKRYERIKDRLAE
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IIRRRAVEGSREES
HHHHHHCCCCCCCC
>Mature Secondary Structure
MDVESRVSAALEAGDHRLAATEIIRGYGPRILGYLNVLLRDETAASDAFALFAEQVWRGM
CCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PGFQRRSSARTWAFKAAWSAAMKVRDDAWRRLGQRLDTTEATRLAADVRTRTAVRLERQR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QELEELRAMLDDEEQTLLVLRLDQQLSWDEVAEVLSQEGKRVDPATLRKRYERIKDRLAE
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IIRRRAVEGSREES
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA