| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is merA [H]
Identifier: 220916845
GI number: 220916845
Start: 1943737
End: 1945116
Strand: Direct
Name: merA [H]
Synonym: A2cp1_1741
Alternate gene names: 220916845
Gene position: 1943737-1945116 (Clockwise)
Preceding gene: 220916839
Following gene: 220916846
Centisome position: 38.65
GC content: 78.19
Gene sequence:
>1380_bases ATGGCAACGGATCTCGACGTGCTGGTCCTCGGCTCCGGCCAGGCCGGCGTGCCGCTCGCGGCGCGGCTCGCCGCCGCGGG GCGGCGGGTGGCGCTGGTCGAGCGCGGCGACCTGGGTGGCACCTGCGTGAACGCCGGCTGCACGCCGACGAAGACGCTCA TCGCGAGCGCGCGCGCCGCGCACGTGGCGAGGACCGCCGGGCGGCTCGGGATCCGCGCCGGCGAGGTGCAGGTGGACCTC GGGGCGGCGATGGACCGCAAGGACGCGGTGGTGGCGCGCTGGCGCGAGGGCGTGCGCCAGCGGCTGGAGGCCGCCGCGCC GCGGCTGCGGCTGGTGCACGGCCCCGCGCGCTTCGTGGCCCCGCGCGAGGTGGAGGTCGCGGGCGAGCGGCTCGCGGCGC CGGTGGTGATCGTGAACGTGGGCGCGCGGCCGGCGGTGGCGCCCGTCCCCGGGCTGGACCGGGTCCCGTTCCTCACCAGC ACGGGCGCGCTCGCGCTGCGGGCGCTCCCCGCGCACCTGGTGGTGCTCGGCGGCGGCTACGTCGGCTGCGAGCTCGCGCA GCTGTTCCGGCGGTTCGGCGCCGGCGTGACGGTGATCGACCCCTCGCCGCACCTGCTCGCCCGCGAGGACGAGGCGGTGA GCGCCGCGCTGGAGGAGGTGTTCCGGCGCGAGGGCATCCGGCTCGCGCTGGGCGCGGCGGCCGAGGCGGTCGAGGGCGGC GCGGGTGCGGTGCGGGTGCGGCTCGCGGGCGGCGCGGTGGAGGAGGGCTCGCACCTGCTCGTCGCCACCGGACGCCGCCC GAACACCGACGACCTCGGCTGCGACGCGGCCGGCGTGGCGCTGGATCGCCGCGGGTTCGTGGAGGTGGACGCGCGCTACT GCACCAGCGCCGAGGGCGTGTACGCGGTGGGCGACGCGGCCGGCGGCCCGCAGTTCACCCACAGCGCCTGGGACGACCAC CGCATCCTGTTCGACCTCCTGCTCGGCCGCGGCCGGCGGACGCGCGACGACCGGCTGGTGCCGCACGTGGTGTTCACCGA TCCGCAGGTCGGGGTGGTCGGGCTGACCGAGCGGGAGGCGCGGGCGCGCGGCGTCCCGTTCGAGCTCGCCACGCTGCCGT ACTCGGCGGTGGCGCGCGCCGTCGAGGTGGACGAGCCGGACGGGGTCGTGCGCGTGCTGGTGGACCCGCGCGACGAGCGG ATCCTGGGCGCGGCGGTGGTGGGGGCGGAGGGAGGGGAGCTCGTGCACGTCCTCGCCGCGCTGATGCAGGCGGGCGCGAG CGCGCGGGCGCTCGTGGACATGGAGATGGCCCACCCGACGTTCTGCGAGGGGCTCCAGTCCGCGGTGATGACGCTCGAGC GCTTCGCGCTGCGGCCCTGA
Upstream 100 bases:
>100_bases GAGGCGTCTTCTCGGGCGCGCGACACCTGGGAGCGGCCTGGCGCGGGCGCCCCGGCGGCGGCAGATCCGCGGGACGCCCA CGCGGGCGCGGAGGTGGCGC
Downstream 100 bases:
>100_bases TCGGAGCCCCTCGGGCGCGGCCGTTTCGCCCCGCGCAACGATCCGGTGCGCCCCCGGACATTGCGCCGGACCGGGCCGGC CGGCACATCCCGGGGCAGGA
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MATDLDVLVLGSGQAGVPLAARLAAAGRRVALVERGDLGGTCVNAGCTPTKTLIASARAAHVARTAGRLGIRAGEVQVDL GAAMDRKDAVVARWREGVRQRLEAAAPRLRLVHGPARFVAPREVEVAGERLAAPVVIVNVGARPAVAPVPGLDRVPFLTS TGALALRALPAHLVVLGGGYVGCELAQLFRRFGAGVTVIDPSPHLLAREDEAVSAALEEVFRREGIRLALGAAAEAVEGG AGAVRVRLAGGAVEEGSHLLVATGRRPNTDDLGCDAAGVALDRRGFVEVDARYCTSAEGVYAVGDAAGGPQFTHSAWDDH RILFDLLLGRGRRTRDDRLVPHVVFTDPQVGVVGLTEREARARGVPFELATLPYSAVARAVEVDEPDGVVRVLVDPRDER ILGAAVVGAEGGELVHVLAALMQAGASARALVDMEMAHPTFCEGLQSAVMTLERFALRP
Sequences:
>Translated_459_residues MATDLDVLVLGSGQAGVPLAARLAAAGRRVALVERGDLGGTCVNAGCTPTKTLIASARAAHVARTAGRLGIRAGEVQVDL GAAMDRKDAVVARWREGVRQRLEAAAPRLRLVHGPARFVAPREVEVAGERLAAPVVIVNVGARPAVAPVPGLDRVPFLTS TGALALRALPAHLVVLGGGYVGCELAQLFRRFGAGVTVIDPSPHLLAREDEAVSAALEEVFRREGIRLALGAAAEAVEGG AGAVRVRLAGGAVEEGSHLLVATGRRPNTDDLGCDAAGVALDRRGFVEVDARYCTSAEGVYAVGDAAGGPQFTHSAWDDH RILFDLLLGRGRRTRDDRLVPHVVFTDPQVGVVGLTEREARARGVPFELATLPYSAVARAVEVDEPDGVVRVLVDPRDER ILGAAVVGAEGGELVHVLAALMQAGASARALVDMEMAHPTFCEGLQSAVMTLERFALRP >Mature_458_residues ATDLDVLVLGSGQAGVPLAARLAAAGRRVALVERGDLGGTCVNAGCTPTKTLIASARAAHVARTAGRLGIRAGEVQVDLG AAMDRKDAVVARWREGVRQRLEAAAPRLRLVHGPARFVAPREVEVAGERLAAPVVIVNVGARPAVAPVPGLDRVPFLTST GALALRALPAHLVVLGGGYVGCELAQLFRRFGAGVTVIDPSPHLLAREDEAVSAALEEVFRREGIRLALGAAAEAVEGGA GAVRVRLAGGAVEEGSHLLVATGRRPNTDDLGCDAAGVALDRRGFVEVDARYCTSAEGVYAVGDAAGGPQFTHSAWDDHR ILFDLLLGRGRRTRDDRLVPHVVFTDPQVGVVGLTEREARARGVPFELATLPYSAVARAVEVDEPDGVVRVLVDPRDERI LGAAVVGAEGGELVHVLAALMQAGASARALVDMEMAHPTFCEGLQSAVMTLERFALRP
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=462, Percent_Identity=30.3030303030303, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=26.9565217391304, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI291045266, Length=424, Percent_Identity=25, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI33519430, Length=440, Percent_Identity=24.3181818181818, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI33519428, Length=440, Percent_Identity=24.3181818181818, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI33519426, Length=440, Percent_Identity=24.3181818181818, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI148277071, Length=440, Percent_Identity=24.3181818181818, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI148277065, Length=440, Percent_Identity=24.3181818181818, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI22035672, Length=456, Percent_Identity=28.0701754385965, Blast_Score=93, Evalue=5e-19, Organism=Escherichia coli, GI87081717, Length=452, Percent_Identity=35.3982300884956, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1786307, Length=470, Percent_Identity=30, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI87082354, Length=468, Percent_Identity=27.7777777777778, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1789915, Length=434, Percent_Identity=29.4930875576037, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1789065, Length=193, Percent_Identity=30.5699481865285, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI32565766, Length=461, Percent_Identity=31.0195227765727, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17557007, Length=471, Percent_Identity=28.0254777070064, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71983419, Length=448, Percent_Identity=27.2321428571429, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71983429, Length=448, Percent_Identity=27.2321428571429, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71982272, Length=447, Percent_Identity=23.9373601789709, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17559934, Length=205, Percent_Identity=28.2926829268293, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321091, Length=469, Percent_Identity=28.997867803838, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6325240, Length=472, Percent_Identity=26.9067796610169, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6325166, Length=470, Percent_Identity=25.531914893617, Blast_Score=137, Evalue=3e-33, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=33.1154684095861, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24640553, Length=496, Percent_Identity=26.8145161290323, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24640549, Length=496, Percent_Identity=26.8145161290323, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24640551, Length=496, Percent_Identity=26.8145161290323, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17737741, Length=490, Percent_Identity=27.5510204081633, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 47908; Mature: 47776
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDLDVLVLGSGQAGVPLAARLAAAGRRVALVERGDLGGTCVNAGCTPTKTLIASARAA CCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHH HVARTAGRLGIRAGEVQVDLGAAMDRKDAVVARWREGVRQRLEAAAPRLRLVHGPARFVA HHHHHHHHCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCC PREVEVAGERLAAPVVIVNVGARPAVAPVPGLDRVPFLTSTGALALRALPAHLVVLGGGY CCHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHCCEEEEEECCCH VGCELAQLFRRFGAGVTVIDPSPHLLAREDEAVSAALEEVFRREGIRLALGAAAEAVEGG HHHHHHHHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCC AGAVRVRLAGGAVEEGSHLLVATGRRPNTDDLGCDAAGVALDRRGFVEVDARYCTSAEGV CCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEECHHHCCCCCCE YAVGDAAGGPQFTHSAWDDHRILFDLLLGRGRRTRDDRLVPHVVFTDPQVGVVGLTEREA EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCHHH RARGVPFELATLPYSAVARAVEVDEPDGVVRVLVDPRDERILGAAVVGAEGGELVHVLAA HHCCCCEEEECCCHHHHHHEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHH LMQAGASARALVDMEMAHPTFCEGLQSAVMTLERFALRP HHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATDLDVLVLGSGQAGVPLAARLAAAGRRVALVERGDLGGTCVNAGCTPTKTLIASARAA CCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHH HVARTAGRLGIRAGEVQVDLGAAMDRKDAVVARWREGVRQRLEAAAPRLRLVHGPARFVA HHHHHHHHCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCC PREVEVAGERLAAPVVIVNVGARPAVAPVPGLDRVPFLTSTGALALRALPAHLVVLGGGY CCHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHCCEEEEEECCCH VGCELAQLFRRFGAGVTVIDPSPHLLAREDEAVSAALEEVFRREGIRLALGAAAEAVEGG HHHHHHHHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCC AGAVRVRLAGGAVEEGSHLLVATGRRPNTDDLGCDAAGVALDRRGFVEVDARYCTSAEGV CCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEECHHHCCCCCCE YAVGDAAGGPQFTHSAWDDHRILFDLLLGRGRRTRDDRLVPHVVFTDPQVGVVGLTEREA EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCHHH RARGVPFELATLPYSAVARAVEVDEPDGVVRVLVDPRDERILGAAVVGAEGGELVHVLAA HHCCCCEEEECCCHHHHHHEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHH LMQAGASARALVDMEMAHPTFCEGLQSAVMTLERFALRP HHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]