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The map label for this gene is 220916780

Identifier: 220916780

GI number: 220916780

Start: 1866719

End: 1867549

Strand: Direct

Name: 220916780

Synonym: A2cp1_1675

Alternate gene names: NA

Gene position: 1866719-1867549 (Clockwise)

Preceding gene: 220916779

Following gene: 220916781

Centisome position: 37.12

GC content: 75.09

Gene sequence:

>831_bases
GTGACCTCCCTCCCGCGAACCCTCGCGCTCGCGGCGGCCGCCCTCGTCCTCGAGGCCGGCGCCGCCCGCGCGCAGACGCC
CGAGCAGCTCCGCCGCGAGCTCGCCGCCATCGGCGTGGTGGAGCGGCTCGGCGCCGAGGTGCCCCGCGACCTCGCCTTCA
CCGGCGAGGACGGGCGCCCGGTGACGCTCCGGGCGCTGGCCGGCCGCCCGGTGCTGCTCTCGTTCAACTACACGAGCTGC
GCGAAGCTCTGCAGCCTGCAGCTCGCCGGCCTCGCCCGGGCGCTCCGCGACGCGGGCTGGAAGGGCGAGGACTTCTCGGT
CTTCACCCTGAGCATCGACCCCGCCGAGACCCTGCCGCAGATCCGCAAGTACGAGGAGACCTTCGTGCAGCAGGCCGGCG
GCGGGGAGGGCGTCACCCGCGCCTGGCACTTCGCCACCGGCGCGAAGCCGGCCATCGACGCGCTCGCCGAGGCGGTGGGC
TTCCGCTACCGCTACGATCCCAAGACCGGCGAGTTCGCGCACCAGGCCACGCTGGTGGTGCTCACCGGCGACGGCCGGGT
CTCCGGCTACCTGCACGGCGTGAGCTACGAGCCGGACGCGCTGCGCACCGCCGTGCGCCGCGCCGCCGACGGGCGGGTGG
CCACCGCCGCCGAGCAGAAGGCGCTCGGCGGGTTCCTCCTCTCCTGCATCGGGTTCTCCCCCGACGATCCGCTCCCGCTG
GCGCTCAAGGTGATGCGCGCGGCGGGCGGGGTGGTCGGGCTCTTCCTCGTCTCCTTCGTCGGCGTCCACGTCGCGCGCGA
TCGTCGGCGCCGAATCAGGAACGCACCGTGA

Upstream 100 bases:

>100_bases
CGGCCGAGGAGCGCTGGGCGCTCACCTACTACGTGCTCGACCTGCGCGGCGCCAAGTCCGCCAAGGCCAAGAAGTAGCGC
CACCCTCGTCCCCTCCTCCC

Downstream 100 bases:

>100_bases
CCGAGCTGCCCATCCGCACCCTCCACCTCCTCGCCGGGGCAGGCCCCGGCTACCTCCCCGCGCGCGCGTCCAGCGTGGCG
GACGGGGTGGACCAGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTSLPRTLALAAAALVLEAGAARAQTPEQLRRELAAIGVVERLGAEVPRDLAFTGEDGRPVTLRALAGRPVLLSFNYTSC
AKLCSLQLAGLARALRDAGWKGEDFSVFTLSIDPAETLPQIRKYEETFVQQAGGGEGVTRAWHFATGAKPAIDALAEAVG
FRYRYDPKTGEFAHQATLVVLTGDGRVSGYLHGVSYEPDALRTAVRRAADGRVATAAEQKALGGFLLSCIGFSPDDPLPL
ALKVMRAAGGVVGLFLVSFVGVHVARDRRRRIRNAP

Sequences:

>Translated_276_residues
MTSLPRTLALAAAALVLEAGAARAQTPEQLRRELAAIGVVERLGAEVPRDLAFTGEDGRPVTLRALAGRPVLLSFNYTSC
AKLCSLQLAGLARALRDAGWKGEDFSVFTLSIDPAETLPQIRKYEETFVQQAGGGEGVTRAWHFATGAKPAIDALAEAVG
FRYRYDPKTGEFAHQATLVVLTGDGRVSGYLHGVSYEPDALRTAVRRAADGRVATAAEQKALGGFLLSCIGFSPDDPLPL
ALKVMRAAGGVVGLFLVSFVGVHVARDRRRRIRNAP
>Mature_275_residues
TSLPRTLALAAAALVLEAGAARAQTPEQLRRELAAIGVVERLGAEVPRDLAFTGEDGRPVTLRALAGRPVLLSFNYTSCA
KLCSLQLAGLARALRDAGWKGEDFSVFTLSIDPAETLPQIRKYEETFVQQAGGGEGVTRAWHFATGAKPAIDALAEAVGF
RYRYDPKTGEFAHQATLVVLTGDGRVSGYLHGVSYEPDALRTAVRRAADGRVATAAEQKALGGFLLSCIGFSPDDPLPLA
LKVMRAAGGVVGLFLVSFVGVHVARDRRRRIRNAP

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29410; Mature: 29279

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPRTLALAAAALVLEAGAARAQTPEQLRRELAAIGVVERLGAEVPRDLAFTGEDGRP
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC
VTLRALAGRPVLLSFNYTSCAKLCSLQLAGLARALRDAGWKGEDFSVFTLSIDPAETLPQ
EEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHH
IRKYEETFVQQAGGGEGVTRAWHFATGAKPAIDALAEAVGFRYRYDPKTGEFAHQATLVV
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE
LTGDGRVSGYLHGVSYEPDALRTAVRRAADGRVATAAEQKALGGFLLSCIGFSPDDPLPL
EECCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALKVMRAAGGVVGLFLVSFVGVHVARDRRRRIRNAP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSLPRTLALAAAALVLEAGAARAQTPEQLRRELAAIGVVERLGAEVPRDLAFTGEDGRP
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC
VTLRALAGRPVLLSFNYTSCAKLCSLQLAGLARALRDAGWKGEDFSVFTLSIDPAETLPQ
EEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHH
IRKYEETFVQQAGGGEGVTRAWHFATGAKPAIDALAEAVGFRYRYDPKTGEFAHQATLVV
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE
LTGDGRVSGYLHGVSYEPDALRTAVRRAADGRVATAAEQKALGGFLLSCIGFSPDDPLPL
EECCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALKVMRAAGGVVGLFLVSFVGVHVARDRRRRIRNAP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA