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The map label for this gene is frc [H]

Identifier: 220916728

GI number: 220916728

Start: 1813905

End: 1815080

Strand: Direct

Name: frc [H]

Synonym: A2cp1_1622

Alternate gene names: 220916728

Gene position: 1813905-1815080 (Clockwise)

Preceding gene: 220916727

Following gene: 220916729

Centisome position: 36.07

GC content: 79.34

Gene sequence:

>1176_bases
GTGGCGCTCCCGCTCGCCGGCGTCCGCATCCTCGACCTCACCCGGCTCCTGCCCGGGCCGTACGCGACGCTGGTCCTCGC
GGACCTCGGCGCCGACGTCGTCAAGGTGGAGGACCCGCAGGGCGGCGACTGGCTGCGCTGGATGCCGCCGCTCGCGGGCG
AGCAGTCCGGCGCATTCCACGCGCTCAACCGCAACAAGCGCTCGCTCGCGATCGACCTCCGCAGGGCCGAGGGCGTCGAG
GCCTTCCTGCGGCTCGCCGCGCGCGCCGACGCCGTCGTCGAGTCCTTCCGGCCCGGCGTGCTCGACCGGCTGGGCGTCGG
CTACGAGGCGCTGCGCGCCCGCGCCCCCGGCCTCGTGCTCTGCTCGATCTCCGGCTACGGGCAGGACGGCCCGTACGCCG
GTCGCGCCGGCCACGACCTCGACTACTGCGCGGTCTCCGGCGTGCTCGCCGCGAACGGCCCGCCGGACGCGCCGCGACCC
CTGGGCGTCCAGGTCGCCGACGTGGCGGGCGGCGCCTGGCCGGCGGTCGCCGGCATCCTGGCGGCGCTGGTGCGGCGCGC
GTCGACCGGCGAGGGCGCGCACGTGGACGTGTCGATGACCGAGGGCGCGCTGGCGCTGCTCGCCATGCCGCTCGGGATGG
CGTGGGCCCGCGGCGCGCCGCTCGCGCGCGGCCGCGAGCTCCTCGACGGCGGCGCGGGCTGCTACGGCGTGTATCGCACC
CGCGACGGCCGCTTCGTCGCGCTCGCCGCGCTCGAGCCCCGGTTCTTCGCCGCGTTCTGCGAGGCCGTGGGCCGGCCGGA
GCTCGCCTCGCGGCAGTGGGACGAGGGCGGCGCCGGGGCGCGCGCCGAGCTCGCGGCGATCTTCGCGGCGCGCACGCGCG
ACGAGTGGGCCGCGTTCGCCGCGGCGCACGACGCGTGCGTGGCGCCGGTGCTGGAAGGCGACGAGCCGCGCGCCGATCCG
CAGCTCGCCGCGCGCGGCGCGTTCCTCGAGGTGGACACGCCGTGGGAGGGCAGGGCGCTCCCCGCGGTGGCGTCGCCGGT
GCGGCTGCGCGGCGAGGCCGCGCCGCGCCGGCCCGCGCCCCGGCTGGGCGAGCACGGCGAGGCGGTGCTGGCCGAGGCCG
GGTTCTCGCCCGCGGAGATCGCGGCCTTGCGCGCGTCGGGTGCGCTCGGAGCGTGA

Upstream 100 bases:

>100_bases
CCCGCAGATGGCGTTCATGTCCGGGAAGCTGAAGATCCAGGGCGACATGGGCCTCGCCATGAAGCTGCAGCAGATCCTGG
TCTGATCCTGGGCCACGGGC

Downstream 100 bases:

>100_bases
ACCCGGGCCCGCGCGCCGCGGCGGGTGCTGGCACTTTCGGTTGACAGGCACCGAGCGGCCGACCAAGTTCGGGGCGGGAT
GCGCGCGCTCCTCGCCGCCG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MALPLAGVRILDLTRLLPGPYATLVLADLGADVVKVEDPQGGDWLRWMPPLAGEQSGAFHALNRNKRSLAIDLRRAEGVE
AFLRLAARADAVVESFRPGVLDRLGVGYEALRARAPGLVLCSISGYGQDGPYAGRAGHDLDYCAVSGVLAANGPPDAPRP
LGVQVADVAGGAWPAVAGILAALVRRASTGEGAHVDVSMTEGALALLAMPLGMAWARGAPLARGRELLDGGAGCYGVYRT
RDGRFVALAALEPRFFAAFCEAVGRPELASRQWDEGGAGARAELAAIFAARTRDEWAAFAAAHDACVAPVLEGDEPRADP
QLAARGAFLEVDTPWEGRALPAVASPVRLRGEAAPRRPAPRLGEHGEAVLAEAGFSPAEIAALRASGALGA

Sequences:

>Translated_391_residues
MALPLAGVRILDLTRLLPGPYATLVLADLGADVVKVEDPQGGDWLRWMPPLAGEQSGAFHALNRNKRSLAIDLRRAEGVE
AFLRLAARADAVVESFRPGVLDRLGVGYEALRARAPGLVLCSISGYGQDGPYAGRAGHDLDYCAVSGVLAANGPPDAPRP
LGVQVADVAGGAWPAVAGILAALVRRASTGEGAHVDVSMTEGALALLAMPLGMAWARGAPLARGRELLDGGAGCYGVYRT
RDGRFVALAALEPRFFAAFCEAVGRPELASRQWDEGGAGARAELAAIFAARTRDEWAAFAAAHDACVAPVLEGDEPRADP
QLAARGAFLEVDTPWEGRALPAVASPVRLRGEAAPRRPAPRLGEHGEAVLAEAGFSPAEIAALRASGALGA
>Mature_390_residues
ALPLAGVRILDLTRLLPGPYATLVLADLGADVVKVEDPQGGDWLRWMPPLAGEQSGAFHALNRNKRSLAIDLRRAEGVEA
FLRLAARADAVVESFRPGVLDRLGVGYEALRARAPGLVLCSISGYGQDGPYAGRAGHDLDYCAVSGVLAANGPPDAPRPL
GVQVADVAGGAWPAVAGILAALVRRASTGEGAHVDVSMTEGALALLAMPLGMAWARGAPLARGRELLDGGAGCYGVYRTR
DGRFVALAALEPRFFAAFCEAVGRPELASRQWDEGGAGARAELAAIFAARTRDEWAAFAAAHDACVAPVLEGDEPRADPQ
LAARGAFLEVDTPWEGRALPAVASPVRLRGEAAPRRPAPRLGEHGEAVLAEAGFSPAEIAALRASGALGA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=383, Percent_Identity=35.2480417754569, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI42794625, Length=394, Percent_Identity=35.5329949238579, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI266456254, Length=394, Percent_Identity=35.5329949238579, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI300863124, Length=409, Percent_Identity=33.9853300733496, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI300863126, Length=381, Percent_Identity=32.2834645669291, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI266458393, Length=289, Percent_Identity=36.3321799307958, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI266458397, Length=258, Percent_Identity=38.3720930232558, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI13376042, Length=409, Percent_Identity=30.3178484107579, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI266458395, Length=145, Percent_Identity=37.9310344827586, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI42822893, Length=145, Percent_Identity=37.9310344827586, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI87082093, Length=381, Percent_Identity=31.2335958005249, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1788717, Length=424, Percent_Identity=29.4811320754717, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1786222, Length=404, Percent_Identity=28.2178217821782, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI115535051, Length=363, Percent_Identity=30.5785123966942, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI32564160, Length=342, Percent_Identity=30.7017543859649, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24585488, Length=333, Percent_Identity=35.1351351351351, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24648431, Length=401, Percent_Identity=34.4139650872818, Blast_Score=189, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 40544; Mature: 40412

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPLAGVRILDLTRLLPGPYATLVLADLGADVVKVEDPQGGDWLRWMPPLAGEQSGAFH
CCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCEE
ALNRNKRSLAIDLRRAEGVEAFLRLAARADAVVESFRPGVLDRLGVGYEALRARAPGLVL
ECCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCEEE
CSISGYGQDGPYAGRAGHDLDYCAVSGVLAANGPPDAPRPLGVQVADVAGGAWPAVAGIL
EEECCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHH
AALVRRASTGEGAHVDVSMTEGALALLAMPLGMAWARGAPLARGRELLDGGAGCYGVYRT
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCEEEEEEE
RDGRFVALAALEPRFFAAFCEAVGRPELASRQWDEGGAGARAELAAIFAARTRDEWAAFA
CCCCEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH
AAHDACVAPVLEGDEPRADPQLAARGAFLEVDTPWEGRALPAVASPVRLRGEAAPRRPAP
HHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCC
RLGEHGEAVLAEAGFSPAEIAALRASGALGA
CCCCCCCEEEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALPLAGVRILDLTRLLPGPYATLVLADLGADVVKVEDPQGGDWLRWMPPLAGEQSGAFH
CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCEE
ALNRNKRSLAIDLRRAEGVEAFLRLAARADAVVESFRPGVLDRLGVGYEALRARAPGLVL
ECCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCEEE
CSISGYGQDGPYAGRAGHDLDYCAVSGVLAANGPPDAPRPLGVQVADVAGGAWPAVAGIL
EEECCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHH
AALVRRASTGEGAHVDVSMTEGALALLAMPLGMAWARGAPLARGRELLDGGAGCYGVYRT
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCEEEEEEE
RDGRFVALAALEPRFFAAFCEAVGRPELASRQWDEGGAGARAELAAIFAARTRDEWAAFA
CCCCEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH
AAHDACVAPVLEGDEPRADPQLAARGAFLEVDTPWEGRALPAVASPVRLRGEAAPRRPAP
HHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCC
RLGEHGEAVLAEAGFSPAEIAALRASGALGA
CCCCCCCEEEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA