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The map label for this gene is 220916727

Identifier: 220916727

GI number: 220916727

Start: 1813557

End: 1813889

Strand: Direct

Name: 220916727

Synonym: A2cp1_1621

Alternate gene names: NA

Gene position: 1813557-1813889 (Clockwise)

Preceding gene: 220916726

Following gene: 220916728

Centisome position: 36.06

GC content: 66.37

Gene sequence:

>333_bases
ATGGCAGTGTCCACCGTGAAGGAAGTCTTCGAGCAGCACATCCCGGCGAAGCTCCAGGCGAAGCCGGACGTCGTCACCCG
GATCGCGGCGGTCTACCAGTTCAACATCAGCGGTCCCGGCGGCGGCACCTGGGGCGTGGACTGCACCGCGCCGGGCGGGA
AGGTGAGCGAGGGCGCGCCCGCCAGCCCGAAGTGCACGGTCGCCGCGACCGAGCAGGACTTCCTGAACATCGTGAACGGC
AAGCTCAACCCGCAGATGGCGTTCATGTCCGGGAAGCTGAAGATCCAGGGCGACATGGGCCTCGCCATGAAGCTGCAGCA
GATCCTGGTCTGA

Upstream 100 bases:

>100_bases
GCCGGGCCGGCTTGACACTCCCGGATCCGCCCAATACGTTGCGCTCTCCCCAGGCTTGATTCTGGAATCAGCGGCCGCCG
AGCGGCTCCGAGGGTCCGAC

Downstream 100 bases:

>100_bases
TCCTGGGCCACGGGCGTGGCGCTCCCGCTCGCCGGCGTCCGCATCCTCGACCTCACCCGGCTCCTGCCCGGGCCGTACGC
GACGCTGGTCCTCGCGGACC

Product: Sterol-binding domain-containing protein

Products: NA

Alternate protein names: SCP-2 Sterol Transfer Family Protein; Scp-2 Sterol Transfer Family Protein; Sterol Carrier Protein

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAVSTVKEVFEQHIPAKLQAKPDVVTRIAAVYQFNISGPGGGTWGVDCTAPGGKVSEGAPASPKCTVAATEQDFLNIVNG
KLNPQMAFMSGKLKIQGDMGLAMKLQQILV

Sequences:

>Translated_110_residues
MAVSTVKEVFEQHIPAKLQAKPDVVTRIAAVYQFNISGPGGGTWGVDCTAPGGKVSEGAPASPKCTVAATEQDFLNIVNG
KLNPQMAFMSGKLKIQGDMGLAMKLQQILV
>Mature_109_residues
AVSTVKEVFEQHIPAKLQAKPDVVTRIAAVYQFNISGPGGGTWGVDCTAPGGKVSEGAPASPKCTVAATEQDFLNIVNGK
LNPQMAFMSGKLKIQGDMGLAMKLQQILV

Specific function: Unknown

COG id: COG3255

COG function: function code I; Putative sterol carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40254986, Length=88, Percent_Identity=46.5909090909091, Blast_Score=86, Evalue=7e-18,
Organism=Homo sapiens, GI55956777, Length=87, Percent_Identity=44.8275862068966, Blast_Score=76, Evalue=6e-15,
Organism=Homo sapiens, GI55956779, Length=87, Percent_Identity=44.8275862068966, Blast_Score=76, Evalue=7e-15,
Organism=Homo sapiens, GI302344767, Length=87, Percent_Identity=44.8275862068966, Blast_Score=76, Evalue=7e-15,
Organism=Homo sapiens, GI302344762, Length=87, Percent_Identity=44.8275862068966, Blast_Score=76, Evalue=7e-15,
Organism=Homo sapiens, GI302344760, Length=87, Percent_Identity=44.8275862068966, Blast_Score=75, Evalue=8e-15,
Organism=Homo sapiens, GI19923233, Length=87, Percent_Identity=44.8275862068966, Blast_Score=75, Evalue=8e-15,
Organism=Homo sapiens, GI4504505, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357673, Length=89, Percent_Identity=40.4494382022472, Blast_Score=76, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24585051, Length=93, Percent_Identity=35.4838709677419, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11545; Mature: 11413

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSTVKEVFEQHIPAKLQAKPDVVTRIAAVYQFNISGPGGGTWGVDCTAPGGKVSEGAP
CCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCCCCCC
ASPKCTVAATEQDFLNIVNGKLNPQMAFMSGKLKIQGDMGLAMKLQQILV
CCCCEEEEECHHHHHHHHCCCCCCEEEEEECEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
AVSTVKEVFEQHIPAKLQAKPDVVTRIAAVYQFNISGPGGGTWGVDCTAPGGKVSEGAP
CHHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCCCCCC
ASPKCTVAATEQDFLNIVNGKLNPQMAFMSGKLKIQGDMGLAMKLQQILV
CCCCEEEEECHHHHHHHHCCCCCCEEEEEECEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA