| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916679
Identifier: 220916679
GI number: 220916679
Start: 1760815
End: 1761651
Strand: Direct
Name: 220916679
Synonym: A2cp1_1573
Alternate gene names: NA
Gene position: 1760815-1761651 (Clockwise)
Preceding gene: 220916678
Following gene: 220916680
Centisome position: 35.01
GC content: 79.21
Gene sequence:
>837_bases GTGACCGCCCAGGCGACCCCAGCCGCGGCGCCGCGCGGTGCCGCCCCGGCGCGGAGCCTCCTCGACGAGGGCCTCGCCGC CTTCGTCGCGCGCGACGTGGGCGCGGCGCACGCCGCGTTCGAGCGCGCGCACCGCAGGGACCCGCGCGACGCCCGCGCCA TGTCCTGGTACGGCGTGACGCTGGTGCTCGTGGAGAGGAACTCGAACCTGGGCGTCACGCTGTGCGACCAGGCGCTGCGC GCCACCGGGCCGGATCCGGAGCTCCTGCTCAACCAGGCCCGCGTGCACCTCGCGCTCAACCAGCGCGAGCGGGCCGTGCG CGCCATCCTGCGCGGGCTCGAGCTGTGGCCGCGCGACGCGAGCCTCTGCATGGCCCGCGACACGATCGGCATCCGCCGCC CGCCGGTGATCGGCGCCCTGTCGCGCAACAACCCGCTGAACCGCTTCCTCGGGCGGATCCGGCACCGGTGGCAGCGGCGC CACGCGCCGCTCTACGAGATGTCGCCGGTCGCGCTGGGCTTCGCGCCCGCGCCCGCGCAGGCCGCCGGCACGCCGCCGCC CGCGCCCCTGCCGCTGGAGGTGGAGGCGAAGCCGGCCGCGGTCGAGCCGTCCGTCGAGCCGCCGGTGGAGCCGCCGGCGG AGCCCACCCCATCCGACGCGGCCGCCGCCTTACCCGCCGGCGACGGGCCGGCACCGTCCGGGCCCGCCGCCGCTGCGTCC CCCGTATCCGACGAGGCGCCGAGCGCGCCCGCGCCTGCCGACTCCGGGCCCGCCGCGCAGGACGCCACTGCGCCCGCGGC CGCGGAGCCGGACGGGCCTCGAGAGGTCGAACGCTGA
Upstream 100 bases:
>100_bases GCGGGCTCGCGCCGCTCATCGCAGGCGTCTCCCGCAGCATCACCGAGGTGGACGAGCACCTCACGCTGGAGGGGCTGCGG ATCCTCCACGAGCGCAACCG
Downstream 100 bases:
>100_bases TGCCGGACTGTCCGCTCCCGCTGGAGACCCTGCCGAAGCCGCTGCAGAAGCACGCCGATCCGAAGGCCCCGCTGCCGCTC CGCACCATGGGCGCCAAGGG
Product: Tetratricopeptide domain-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Domain Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTAQATPAAAPRGAAPARSLLDEGLAAFVARDVGAAHAAFERAHRRDPRDARAMSWYGVTLVLVERNSNLGVTLCDQALR ATGPDPELLLNQARVHLALNQRERAVRAILRGLELWPRDASLCMARDTIGIRRPPVIGALSRNNPLNRFLGRIRHRWQRR HAPLYEMSPVALGFAPAPAQAAGTPPPAPLPLEVEAKPAAVEPSVEPPVEPPAEPTPSDAAAALPAGDGPAPSGPAAAAS PVSDEAPSAPAPADSGPAAQDATAPAAAEPDGPREVER
Sequences:
>Translated_278_residues MTAQATPAAAPRGAAPARSLLDEGLAAFVARDVGAAHAAFERAHRRDPRDARAMSWYGVTLVLVERNSNLGVTLCDQALR ATGPDPELLLNQARVHLALNQRERAVRAILRGLELWPRDASLCMARDTIGIRRPPVIGALSRNNPLNRFLGRIRHRWQRR HAPLYEMSPVALGFAPAPAQAAGTPPPAPLPLEVEAKPAAVEPSVEPPVEPPAEPTPSDAAAALPAGDGPAPSGPAAAAS PVSDEAPSAPAPADSGPAAQDATAPAAAEPDGPREVER >Mature_277_residues TAQATPAAAPRGAAPARSLLDEGLAAFVARDVGAAHAAFERAHRRDPRDARAMSWYGVTLVLVERNSNLGVTLCDQALRA TGPDPELLLNQARVHLALNQRERAVRAILRGLELWPRDASLCMARDTIGIRRPPVIGALSRNNPLNRFLGRIRHRWQRRH APLYEMSPVALGFAPAPAQAAGTPPPAPLPLEVEAKPAAVEPSVEPPVEPPAEPTPSDAAAALPAGDGPAPSGPAAAASP VSDEAPSAPAPADSGPAAQDATAPAAAEPDGPREVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28957; Mature: 28826
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQATPAAAPRGAAPARSLLDEGLAAFVARDVGAAHAAFERAHRRDPRDARAMSWYGVT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECEE LVLVERNSNLGVTLCDQALRATGPDPELLLNQARVHLALNQRERAVRAILRGLELWPRDA EEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCH SLCMARDTIGIRRPPVIGALSRNNPLNRFLGRIRHRWQRRHAPLYEMSPVALGFAPAPAQ HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC AAGTPPPAPLPLEVEAKPAAVEPSVEPPVEPPAEPTPSDAAAALPAGDGPAPSGPAAAAS CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC PVSDEAPSAPAPADSGPAAQDATAPAAAEPDGPREVER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAQATPAAAPRGAAPARSLLDEGLAAFVARDVGAAHAAFERAHRRDPRDARAMSWYGVT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECEE LVLVERNSNLGVTLCDQALRATGPDPELLLNQARVHLALNQRERAVRAILRGLELWPRDA EEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCH SLCMARDTIGIRRPPVIGALSRNNPLNRFLGRIRHRWQRRHAPLYEMSPVALGFAPAPAQ HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC AAGTPPPAPLPLEVEAKPAAVEPSVEPPVEPPAEPTPSDAAAALPAGDGPAPSGPAAAAS CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC PVSDEAPSAPAPADSGPAAQDATAPAAAEPDGPREVER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA