Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916505
Identifier: 220916505
GI number: 220916505
Start: 1563526
End: 1564668
Strand: Reverse
Name: 220916505
Synonym: A2cp1_1399
Alternate gene names: NA
Gene position: 1564668-1563526 (Counterclockwise)
Preceding gene: 220916508
Following gene: 220916504
Centisome position: 31.11
GC content: 82.85
Gene sequence:
>1143_bases ATGACCTGCGAAGGCTGCGGCGCGGCGCTCGACGCCACCATGGACCGGTGCCCGGCGTGCGGCCGCGAGCTCGAGTTCGG CCGGCTCACCGGCATCCTCGGCGTGGTCTGCCGCGCCTGCGACGCGTACAACGAGCCGGGCGCCCGGGCCTGCTCCGCCT GCGGCAAGCCGCTCGGGGCGGGCGAGCCGCCGCCGACCGGCGGCCCGAACCCGCCGGCGCCGGCTCCGGTCGCCCCGGCC CCTCGGGCGCGGACCGCCGCACCCGCCCCCGCGCCGGCGGCCCCGGCCCCTGCGCGGGCGAGCGCCCCGCCCGCCCCCGC GCCGCCCGCGCCCGGTTCACCGCTCGTGCACGCCCTCGGTCGCGCCGGCGCCGCCGCCACCCGCTTCATTCCGGCCTCCG CCATCCGGGCCGCGCTCCGGCCCGACCCGCGCCCCGCCGCGGCCCCGCCTCCGCCGTCCCCGGCGGTGCCCCCGCTCGCG CCCGGCCGCGTGGAGCTGGTGCCCGAGCCGAGCCCCGGGCCGGCGCGCGCGCCGTTCCGCCTGGCCCGCCCCACCACCGT GGCCGGCCGCAGCGAGGGCGCGCTCCGCCTCGCCGACGACCCGTCGATCGGCGACCGCCACGCCACGTTCCTGTTCCGCG ACGGCGCGCTGCTGGTCCGCGACGAGGGCGCGCCGGGCGGCGTGCTGGTGCGACTGCGCGGCCACCCCGCCTCGCTCCGC CCCGGCGATCCGTTCGCGGTGGGCGGCCGGCTGCTCCGCTACGCCGGGCCGCTGCCGCCGCCGCCGCTGCCCGCGGCCGA CGGCACCCGGCGCATCGGCTCTCCGCGCCCGCCGCCGCCGGCGGTGGCCGTGGAGGAGCTGCTGGAGGGCGGCGTGCCCG GGCGCACCTGGGTGCGCAGCGGGCCGTCGATCACCGTGGGCCGGGCCGGCGCGGCGGTGTCGCTGGGCGACGACCCGTCG ATCGCGCCGGCGCACGCCGAGCTGCGCATCGAGGCGGACGGGACCGCTCGCCTGCGCGACCTCGGCTCCGCCACCGGGAC GTTCGCGCGCGTCCCGCCGCACGGCGAGCGCGAGCTCCGCGAGGGCGACGCGGTGCGCCTGGGCCGGACGGTGCTGCGCG TGAGCGCGGTCGCGGATCCCTGA
Upstream 100 bases:
>100_bases GGGCGGCAGCGTGGTCTGGACCCGGGCCCGGCCTGCACCGGACGTTGAGGTCCCCCGGCAGCGCGCGGTAACGTCGCGCC GGGCCAGGAGAGGCGACGGG
Downstream 100 bases:
>100_bases GGGCCGCCGAGGAGGAGCGAACCATGGCCGTCGTGTTCGTCGCGATCACCCCGCTCGGCACCGCGACGCCGAGCGTGTCG CGCTGGGTCGCCGGGGTGGA
Product: FHA domain containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTCEGCGAALDATMDRCPACGRELEFGRLTGILGVVCRACDAYNEPGARACSACGKPLGAGEPPPTGGPNPPAPAPVAPA PRARTAAPAPAPAAPAPARASAPPAPAPPAPGSPLVHALGRAGAAATRFIPASAIRAALRPDPRPAAAPPPPSPAVPPLA PGRVELVPEPSPGPARAPFRLARPTTVAGRSEGALRLADDPSIGDRHATFLFRDGALLVRDEGAPGGVLVRLRGHPASLR PGDPFAVGGRLLRYAGPLPPPPLPAADGTRRIGSPRPPPPAVAVEELLEGGVPGRTWVRSGPSITVGRAGAAVSLGDDPS IAPAHAELRIEADGTARLRDLGSATGTFARVPPHGERELREGDAVRLGRTVLRVSAVADP
Sequences:
>Translated_380_residues MTCEGCGAALDATMDRCPACGRELEFGRLTGILGVVCRACDAYNEPGARACSACGKPLGAGEPPPTGGPNPPAPAPVAPA PRARTAAPAPAPAAPAPARASAPPAPAPPAPGSPLVHALGRAGAAATRFIPASAIRAALRPDPRPAAAPPPPSPAVPPLA PGRVELVPEPSPGPARAPFRLARPTTVAGRSEGALRLADDPSIGDRHATFLFRDGALLVRDEGAPGGVLVRLRGHPASLR PGDPFAVGGRLLRYAGPLPPPPLPAADGTRRIGSPRPPPPAVAVEELLEGGVPGRTWVRSGPSITVGRAGAAVSLGDDPS IAPAHAELRIEADGTARLRDLGSATGTFARVPPHGERELREGDAVRLGRTVLRVSAVADP >Mature_379_residues TCEGCGAALDATMDRCPACGRELEFGRLTGILGVVCRACDAYNEPGARACSACGKPLGAGEPPPTGGPNPPAPAPVAPAP RARTAAPAPAPAAPAPARASAPPAPAPPAPGSPLVHALGRAGAAATRFIPASAIRAALRPDPRPAAAPPPPSPAVPPLAP GRVELVPEPSPGPARAPFRLARPTTVAGRSEGALRLADDPSIGDRHATFLFRDGALLVRDEGAPGGVLVRLRGHPASLRP GDPFAVGGRLLRYAGPLPPPPLPAADGTRRIGSPRPPPPAVAVEELLEGGVPGRTWVRSGPSITVGRAGAAVSLGDDPSI APAHAELRIEADGTARLRDLGSATGTFARVPPHGERELREGDAVRLGRTVLRVSAVADP
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38186; Mature: 38055
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCEGCGAALDATMDRCPACGRELEFGRLTGILGVVCRACDAYNEPGARACSACGKPLGA CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC GEPPPTGGPNPPAPAPVAPAPRARTAAPAPAPAAPAPARASAPPAPAPPAPGSPLVHALG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAGAAATRFIPASAIRAALRPDPRPAAAPPPPSPAVPPLAPGRVELVPEPSPGPARAPFR HCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE LARPTTVAGRSEGALRLADDPSIGDRHATFLFRDGALLVRDEGAPGGVLVRLRGHPASLR ECCCCEECCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEECCCCCCCC PGDPFAVGGRLLRYAGPLPPPPLPAADGTRRIGSPRPPPPAVAVEELLEGGVPGRTWVRS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCC GPSITVGRAGAAVSLGDDPSIAPAHAELRIEADGTARLRDLGSATGTFARVPPHGERELR CCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEECCCCCHHHHH EGDAVRLGRTVLRVSAVADP CCCHHHHHHHHHEEECCCCC >Mature Secondary Structure TCEGCGAALDATMDRCPACGRELEFGRLTGILGVVCRACDAYNEPGARACSACGKPLGA CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC GEPPPTGGPNPPAPAPVAPAPRARTAAPAPAPAAPAPARASAPPAPAPPAPGSPLVHALG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAGAAATRFIPASAIRAALRPDPRPAAAPPPPSPAVPPLAPGRVELVPEPSPGPARAPFR HCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE LARPTTVAGRSEGALRLADDPSIGDRHATFLFRDGALLVRDEGAPGGVLVRLRGHPASLR ECCCCEECCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEECCCCCCCC PGDPFAVGGRLLRYAGPLPPPPLPAADGTRRIGSPRPPPPAVAVEELLEGGVPGRTWVRS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCC GPSITVGRAGAAVSLGDDPSIAPAHAELRIEADGTARLRDLGSATGTFARVPPHGERELR CCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEECCCCCHHHHH EGDAVRLGRTVLRVSAVADP CCCHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA