Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916358
Identifier: 220916358
GI number: 220916358
Start: 1400886
End: 1402094
Strand: Reverse
Name: 220916358
Synonym: A2cp1_1252
Alternate gene names: NA
Gene position: 1402094-1400886 (Counterclockwise)
Preceding gene: 220916362
Following gene: 220916357
Centisome position: 27.88
GC content: 80.56
Gene sequence:
>1209_bases ATGACGACCCTCGACCCCGACCGCCTGCTGGCCATGCTCCGCGACCCGAACGTGGAGAGCCAGGAGATCGCGGCGCTCGT CGGCGCCCCGCGCGAGGAGGTGGGCCGCGCCGCCCGGCTGGTGCTCGGGCTGGCCCGCGCGAAGCCGGAGGAGGTCGCGA CGCTCCCAGCGCCGCTCGCGCTGGCCCTCTCGCGCGCCGCGCTCGCGGCGCCCCGCGCGGACGTGCTGGCCGCGCTCGCC GGCCACGCCTCCCGCGACGTCGCCAAGGAGGCGAAGCGCGGGCTGCACCTCCTGCGCATCCGAGGGGTCCAGGTCCCGGA GCCGCCGCGGCCCGCGCCGCCGGTCGCCGCGCCCGCGCCGGCCGAGCCGCCCCCGCCCGCCTACGCCTCGGCGGTGGACG GCCGCGGCGAGCGGGCGGTGTGGCTCTCGCGCGCCGTGCCGGGCAAGGGCATCGAGGTCGGGCAGGCGGTGATCTCCGAC GAGCGCGGACTGGTGGAGCTGCAGGTGGCGCTGCTCGGGCGCAAGGAGTGGCGCGCGTTCGCGCGGGGCATCCTCGACCG CGGCGCGGCCATGGGCGTCGGCGAGATCGAGCGCGCCCGCGCCCACGCGCTGGTGGCCGAGGCCCGCGCGCGCAACGAGG TGACCGGCCAGCGCGTACCCGAGGGCAGCGACCTCTGGCTGGCGCAGCTCGGGCCGGCCGCGCCGCTCCCGGATCCGGCG GCGCGCTTCCCCGCGCTCCCGGACGCGGAGGAGGCCGCCGCCCTCGAGGCATCCGGCGCGCTCCACGACCTGCCGCTGCT GCGCGGCTGGCTCGCCGACGAGGGCTACCTGCGCGAGGTCGCGGCGCGGCTCGACGAGGTGGCGGTGTCGCCGCTCTACC TCGACGAGCGGCAGCGCGCCGAGCAGATGGCGCGCGTCCTGGACGAGGCGGTGGTCCGCTACCTCGAGCCGCCGCGGCGC GCGCTGCTGGCGGGCCGCCTCTACTCGGTGGCCGAGCACCTCGACGCCGCCGGCGACGCCGCGAACGCCCGCGCCGCCGC CGCGGCCGCGCGGGCGCTGGTGGCCGGCAGGGCGGCGGGCGAGATCCCGTTCGCCCGGCGGCTCCTCGAGAAGGCGTTCC CCCCCGCCGCGCCGGCCACCGCCGGGCCGGACGCCGGCGCGCCGCCGCCCGGCGAGGCGGGATCGCCGCTCATCGTGGCG CCGCGGTGA
Upstream 100 bases:
>100_bases AACCGGTGCGCCAGGGTGTCAAGCGAAGGACGGTCGCAGCCGGGGCGGCCGGGGGACGTCGTGTGGACCCGCCCCGATCC GGCCGCTAGATTGCCCGGCG
Downstream 100 bases:
>100_bases ACCGTCGCGCCGAAGCGCCCGGCCCCCCTCGCGAATTGACCCCCGGGGCGGCCTGCGCTACCTCTGCACCGTGCCGCCCC CCGCCGGTCCGTCGCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTTLDPDRLLAMLRDPNVESQEIAALVGAPREEVGRAARLVLGLARAKPEEVATLPAPLALALSRAALAAPRADVLAALA GHASRDVAKEAKRGLHLLRIRGVQVPEPPRPAPPVAAPAPAEPPPPAYASAVDGRGERAVWLSRAVPGKGIEVGQAVISD ERGLVELQVALLGRKEWRAFARGILDRGAAMGVGEIERARAHALVAEARARNEVTGQRVPEGSDLWLAQLGPAAPLPDPA ARFPALPDAEEAAALEASGALHDLPLLRGWLADEGYLREVAARLDEVAVSPLYLDERQRAEQMARVLDEAVVRYLEPPRR ALLAGRLYSVAEHLDAAGDAANARAAAAAARALVAGRAAGEIPFARRLLEKAFPPAAPATAGPDAGAPPPGEAGSPLIVA PR
Sequences:
>Translated_402_residues MTTLDPDRLLAMLRDPNVESQEIAALVGAPREEVGRAARLVLGLARAKPEEVATLPAPLALALSRAALAAPRADVLAALA GHASRDVAKEAKRGLHLLRIRGVQVPEPPRPAPPVAAPAPAEPPPPAYASAVDGRGERAVWLSRAVPGKGIEVGQAVISD ERGLVELQVALLGRKEWRAFARGILDRGAAMGVGEIERARAHALVAEARARNEVTGQRVPEGSDLWLAQLGPAAPLPDPA ARFPALPDAEEAAALEASGALHDLPLLRGWLADEGYLREVAARLDEVAVSPLYLDERQRAEQMARVLDEAVVRYLEPPRR ALLAGRLYSVAEHLDAAGDAANARAAAAAARALVAGRAAGEIPFARRLLEKAFPPAAPATAGPDAGAPPPGEAGSPLIVA PR >Mature_401_residues TTLDPDRLLAMLRDPNVESQEIAALVGAPREEVGRAARLVLGLARAKPEEVATLPAPLALALSRAALAAPRADVLAALAG HASRDVAKEAKRGLHLLRIRGVQVPEPPRPAPPVAAPAPAEPPPPAYASAVDGRGERAVWLSRAVPGKGIEVGQAVISDE RGLVELQVALLGRKEWRAFARGILDRGAAMGVGEIERARAHALVAEARARNEVTGQRVPEGSDLWLAQLGPAAPLPDPAA RFPALPDAEEAAALEASGALHDLPLLRGWLADEGYLREVAARLDEVAVSPLYLDERQRAEQMARVLDEAVVRYLEPPRRA LLAGRLYSVAEHLDAAGDAANARAAAAAARALVAGRAAGEIPFARRLLEKAFPPAAPATAGPDAGAPPPGEAGSPLIVAP R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41968; Mature: 41837
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLDPDRLLAMLRDPNVESQEIAALVGAPREEVGRAARLVLGLARAKPEEVATLPAPLA CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH LALSRAALAAPRADVLAALAGHASRDVAKEAKRGLHLLRIRGVQVPEPPRPAPPVAAPAP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCC AEPPPPAYASAVDGRGERAVWLSRAVPGKGIEVGQAVISDERGLVELQVALLGRKEWRAF CCCCCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEHHHHHHCHHHHHHH ARGILDRGAAMGVGEIERARAHALVAEARARNEVTGQRVPEGSDLWLAQLGPAAPLPDPA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCCCCCCH ARFPALPDAEEAAALEASGALHDLPLLRGWLADEGYLREVAARLDEVAVSPLYLDERQRA HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EQMARVLDEAVVRYLEPPRRALLAGRLYSVAEHLDAAGDAANARAAAAAARALVAGRAAG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC EIPFARRLLEKAFPPAAPATAGPDAGAPPPGEAGSPLIVAPR CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TTLDPDRLLAMLRDPNVESQEIAALVGAPREEVGRAARLVLGLARAKPEEVATLPAPLA CCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH LALSRAALAAPRADVLAALAGHASRDVAKEAKRGLHLLRIRGVQVPEPPRPAPPVAAPAP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCC AEPPPPAYASAVDGRGERAVWLSRAVPGKGIEVGQAVISDERGLVELQVALLGRKEWRAF CCCCCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEHHHHHHCHHHHHHH ARGILDRGAAMGVGEIERARAHALVAEARARNEVTGQRVPEGSDLWLAQLGPAAPLPDPA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCCCCCCH ARFPALPDAEEAAALEASGALHDLPLLRGWLADEGYLREVAARLDEVAVSPLYLDERQRA HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EQMARVLDEAVVRYLEPPRRALLAGRLYSVAEHLDAAGDAANARAAAAAARALVAGRAAG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC EIPFARRLLEKAFPPAAPATAGPDAGAPPPGEAGSPLIVAPR CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA