Click here to switch to the map view.

The map label for this gene is nudF [H]

Identifier: 220916357

GI number: 220916357

Start: 1400393

End: 1400815

Strand: Reverse

Name: nudF [H]

Synonym: A2cp1_1251

Alternate gene names: 220916357

Gene position: 1400815-1400393 (Counterclockwise)

Preceding gene: 220916358

Following gene: 220916356

Centisome position: 27.85

GC content: 77.54

Gene sequence:

>423_bases
GTGCCGCCCCCCGCCGGTCCGTCGCCCACCGTGGACGTGGTGATCCTCCTGCCCGGGGACCGGGTGGTGATGGTGCGCCG
CAAGTACCCGCCGCCCGGCTGGGCGCTTCCGGGCGGCTTCGTGGACGCCGGCGAGACGCTCGAGGCGGCCGCGATCCGCG
AGGCGCGCGAGGAGACCGGCCTCGAGGTGACGCTCGAGGACCTCGTCTACGTGTACTCGGACCCGCGCCGCGATCCCCGC
CGCCACACGCTCTCGGCGGTGTTCATCGGGCGCGCCGCCGGCGAGCCGGCCGGCGCCGACGACGCGGAGGAGGCGCGCGC
CTTCGCCTGGGACGCGCTGCCCTCGCCCATCGCCTTCGACCACGGCGAGATCCTCGCCGACGCGCGGCGCCTGCTGCTCA
CCGGCGCCCGGCGCCGCCCATGA

Upstream 100 bases:

>100_bases
GGATCGCCGCTCATCGTGGCGCCGCGGTGAACCGTCGCGCCGAAGCGCCCGGCCCCCCTCGCGAATTGACCCCCGGGGCG
GCCTGCGCTACCTCTGCACC

Downstream 100 bases:

>100_bases
CCCCGCTCTCCGCCACCGACCGCGCCGCCCTGCTCGGCATCGCGCGCGGCGCGATCCTCGCCCACCTCGGCCTGACCCCG
CCGCGCCCGCTGCCGGAGGA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPPPAGPSPTVDVVILLPGDRVVMVRRKYPPPGWALPGGFVDAGETLEAAAIREAREETGLEVTLEDLVYVYSDPRRDPR
RHTLSAVFIGRAAGEPAGADDAEEARAFAWDALPSPIAFDHGEILADARRLLLTGARRRP

Sequences:

>Translated_140_residues
MPPPAGPSPTVDVVILLPGDRVVMVRRKYPPPGWALPGGFVDAGETLEAAAIREAREETGLEVTLEDLVYVYSDPRRDPR
RHTLSAVFIGRAAGEPAGADDAEEARAFAWDALPSPIAFDHGEILADARRLLLTGARRRP
>Mature_139_residues
PPPAGPSPTVDVVILLPGDRVVMVRRKYPPPGWALPGGFVDAGETLEAAAIREAREETGLEVTLEDLVYVYSDPRRDPRR
HTLSAVFIGRAAGEPAGADDAEEARAFAWDALPSPIAFDHGEILADARRLLLTGARRRP

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15132; Mature: 15001

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPAGPSPTVDVVILLPGDRVVMVRRKYPPPGWALPGGFVDAGETLEAAAIREAREETG
CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
LEVTLEDLVYVYSDPRRDPRRHTLSAVFIGRAAGEPAGADDAEEARAFAWDALPSPIAFD
CEEEHHHEEEECCCCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HGEILADARRLLLTGARRRP
CHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PPPAGPSPTVDVVILLPGDRVVMVRRKYPPPGWALPGGFVDAGETLEAAAIREAREETG
CCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
LEVTLEDLVYVYSDPRRDPRRHTLSAVFIGRAAGEPAGADDAEEARAFAWDALPSPIAFD
CEEEHHHEEEECCCCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HGEILADARRLLLTGARRRP
CHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]