Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915985
Identifier: 220915985
GI number: 220915985
Start: 983493
End: 984152
Strand: Reverse
Name: 220915985
Synonym: A2cp1_0871
Alternate gene names: NA
Gene position: 984152-983493 (Counterclockwise)
Preceding gene: 220915986
Following gene: 220915982
Centisome position: 19.57
GC content: 74.85
Gene sequence:
>660_bases ATGGACGTGAGTCGCGGATTGGGCCTGGCCCTCGGGGCTGCGGCGCTGCTCGTCACCGCGGGCTGCCAGGACAAGGGTGA TCGCACGCAGCAGGGCTCCGCCCCGGGCGCCACGGCGTCGCGGCAGGCCGAGCGCAGCCAGGAGCAGGCGGCGGACGAGT CGAAGAAGGCCGCGAAGCGGCACGACGAGGCGGCCGACGCGCAGAAGGACGTGCGCGAGTCGCAGGAGAAGCTCGCGGAG GCGCAGCAGAAGGCCGGCCAGAAGACCGGCGAGGCGCAGCAGCACGAGCAGGCGGCGCAGCAGCAGTCGCAGACCGCGAC GGCCGAGTCCGAGCAGGCGCGGCGCGAGTCCGCGCAGGCGGCGGGCACCGGCAGCGCCGCGGGCACCGCGGGCGCGACCG CCCAGGCGGGCGAGCAGAAGACCGCCACCGGGCAGGTGGTCAGCGCGAGCAGCCAGGAGCTGGTGCTGCGCGACCAGGCC GGCGGCCAGGAGCTGAAGCTGAAGGTCGGCGCCGACACGCCGGTGATGAAGGACGGGAAGCGGGCCTCCATCTCCGACGT GAAGGAGGGCGCGCAGGTCCGGGCGTCCTACTCGGAGCAGGGTGGGCAGCCGCAGGCCATCCGCATCGAGGTGCAGGGCG GATCGACCGGGACGCGGTAG
Upstream 100 bases:
>100_bases GCGCACGGTGCGCGCGTGCGCGGGCGCCCGCCCGGGCCCTCCGCACTCGCGTCCCGCTCTTGAGCGCCGGTGCCAGCAAC GGCGCCGGGAGGGGTACGAC
Downstream 100 bases:
>100_bases CCGCCGCCGGCGAGCGTGGCCCCGCCCACCCCGGGCGCGTTCCCGGGGCGGGCGGGACCTCGCGTCTCCGGGTCAGGGGG GCAGGACCGTCTCGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDVSRGLGLALGAAALLVTAGCQDKGDRTQQGSAPGATASRQAERSQEQAADESKKAAKRHDEAADAQKDVRESQEKLAE AQQKAGQKTGEAQQHEQAAQQQSQTATAESEQARRESAQAAGTGSAAGTAGATAQAGEQKTATGQVVSASSQELVLRDQA GGQELKLKVGADTPVMKDGKRASISDVKEGAQVRASYSEQGGQPQAIRIEVQGGSTGTR
Sequences:
>Translated_219_residues MDVSRGLGLALGAAALLVTAGCQDKGDRTQQGSAPGATASRQAERSQEQAADESKKAAKRHDEAADAQKDVRESQEKLAE AQQKAGQKTGEAQQHEQAAQQQSQTATAESEQARRESAQAAGTGSAAGTAGATAQAGEQKTATGQVVSASSQELVLRDQA GGQELKLKVGADTPVMKDGKRASISDVKEGAQVRASYSEQGGQPQAIRIEVQGGSTGTR >Mature_219_residues MDVSRGLGLALGAAALLVTAGCQDKGDRTQQGSAPGATASRQAERSQEQAADESKKAAKRHDEAADAQKDVRESQEKLAE AQQKAGQKTGEAQQHEQAAQQQSQTATAESEQARRESAQAAGTGSAAGTAGATAQAGEQKTATGQVVSASSQELVLRDQA GGQELKLKVGADTPVMKDGKRASISDVKEGAQVRASYSEQGGQPQAIRIEVQGGSTGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22456; Mature: 22456
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSRGLGLALGAAALLVTAGCQDKGDRTQQGSAPGATASRQAERSQEQAADESKKAAKR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HDEAADAQKDVRESQEKLAEAQQKAGQKTGEAQQHEQAAQQQSQTATAESEQARRESAQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTGSAAGTAGATAQAGEQKTATGQVVSASSQELVLRDQAGGQELKLKVGADTPVMKDGK CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC RASISDVKEGAQVRASYSEQGGQPQAIRIEVQGGSTGTR CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MDVSRGLGLALGAAALLVTAGCQDKGDRTQQGSAPGATASRQAERSQEQAADESKKAAKR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HDEAADAQKDVRESQEKLAEAQQKAGQKTGEAQQHEQAAQQQSQTATAESEQARRESAQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTGSAAGTAGATAQAGEQKTATGQVVSASSQELVLRDQAGGQELKLKVGADTPVMKDGK CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC RASISDVKEGAQVRASYSEQGGQPQAIRIEVQGGSTGTR CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA