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The map label for this gene is clpS [H]

Identifier: 220915956

GI number: 220915956

Start: 945794

End: 946120

Strand: Reverse

Name: clpS [H]

Synonym: A2cp1_0842

Alternate gene names: 220915956

Gene position: 946120-945794 (Counterclockwise)

Preceding gene: 220915958

Following gene: 220915955

Centisome position: 18.81

GC content: 64.53

Gene sequence:

>327_bases
ATGGCTGAACGAACCCGTCCCGGGGGCGATACGGAGGTCGTCGTCCCCAAGACGCGCGCGGAGCGGGAGACGAAGCGCCC
GCCGCTGTACAGGGTACTGCTGCACAACGACCATTACACGACGCAGGAGTTCGTGGATTTCGTCCTCATGACGGTCTTCA
ACCACGACCCGGAGTCCGCCCACCGGATCATGCTCCACGTTCACATGCACGGGGTGGGGGTCGCCGGTATCTATCCCTAC
GAGATCGCCGAGACGAAGGCGCGGAAGACGATGGACCTGGCGCGCGAGGCGGAATACCCGCTGCTCGTGACGATCGAGCC
GGAGTAG

Upstream 100 bases:

>100_bases
GGCGAGCAGCCGGCTCGGTCCTGCGGGGGAGCCCCGGGTCCGCGCGCAGGGGGCCTGCGGGTGCGCGCCGGGTCCGCCGG
ACGCATTAGAATGGACGGCC

Downstream 100 bases:

>100_bases
CGATGGTGACGGTGTCCAAGGAGCTGCAGCAGACCCTCCAGGCCGCGGTGGGCGAGGCCCGCCGCCGGCGCCACGAGTAC
GTGACGCTGGAGCACCTGCT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESAHRIMLHVHMHGVGVAGIYPY
EIAETKARKTMDLAREAEYPLLVTIEPE

Sequences:

>Translated_108_residues
MAERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESAHRIMLHVHMHGVGVAGIYPY
EIAETKARKTMDLAREAEYPLLVTIEPE
>Mature_107_residues
AERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESAHRIMLHVHMHGVGVAGIYPYE
IAETKARKTMDLAREAEYPLLVTIEPE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=86, Percent_Identity=45.3488372093023, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 12468; Mature: 12337

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESA
CCCCCCCCCCCEEEEECCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
HRIMLHVHMHGVGVAGIYPYEIAETKARKTMDLAREAEYPLLVTIEPE
EEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
AERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESA
CCCCCCCCCCEEEEECCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
HRIMLHVHMHGVGVAGIYPYEIAETKARKTMDLAREAEYPLLVTIEPE
EEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA