| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is hemK [C]
Identifier: 220915946
GI number: 220915946
Start: 930510
End: 931670
Strand: Reverse
Name: hemK [C]
Synonym: A2cp1_0832
Alternate gene names: 220915946
Gene position: 931670-930510 (Counterclockwise)
Preceding gene: 220915949
Following gene: 220915944
Centisome position: 18.52
GC content: 80.79
Gene sequence:
>1161_bases ATGACGCGCACCGAACCGACCGCCGGGACGCCGCCCCGGGAGCTGGTGTGGCGGGATGCCACCGGGGAGCACAGGGCGCG CTGGGCGTCCGGCTCGGCGCCCCCGCCGGCCCGCCTCGGCCCGGCCGGCGACGCCACCCGCGCCGGCGAGGCGCTGGCCC GGGCGCGGCGCGGCGAGGGGCTGGTCTACGCCGGCGACTACCACAACGCCCGCCAGCTCCTCGCGGCCATGGGCCGGCGC CTCGAGCACCCTGCGCCCAGGGGCGCAGGCCTGGGGGCGGCCTTCCGCGCGGAGCGGGAGCGGATGCGGCTCGAGCACGA GGTGCTGGCCCGGCTGCTCGTGCCGGTCGAGCCCGGGTGGCGGATCGCCCTGCGGCGCGCGCCGGACGTGGCGGCGGCCT GCGCCGAGGGACTGGGGCCGCCGCCGGACGGGCCCGCGCTGCTGCCGCTGCGGGAGCTGCTCGGGCTGGTCGCCGCGCAC GAGTGGCGGCGGCGCGGGGTGGAGGTCCCGGCGCTCGGGGCGCGGGTGCACCCGTTTCACGGAGTGTACGCACCCATCCG GGGCGAGTACGTGGACCTGGTCGGCGCCGCGGCCAAGGAGCGGCCGCTGGACGGCAAGCGCGCCTTCGACGTCGGGACCG GCACCGGGGTGCTCGCGCTGGTGCTGGCCCGGGCGGGCGCCCGGGTGATCGCCACCGACCTCGAGCCGCGCGCGGTGGCC TGCGCCCGGGAGAACGCGGCCCGGCTCGGGCTGGCCGGACAGGTCGAGGTGGTGGAGGCGGACCTGTTCCCGGAGGGCCT GGCGGACGTGATCGTGTGCAACCCGCCCTGGATCCCGGGCCCGGCGCGCGGCCCGCTCGAGCGGGCGGTCTACGATCCGG GCGGCGCGTTCCTCGAGCGGCTGGTGCGCGGGCTCCCGGCGCACCTCGCCCCCGGCGGCGAGGCGTGGATCGTCCTCTCC GACCTGGCCGAGCGGCTCGGGCTCCGCCCGCCGGGCGAGGTCGAGCGGCTGGCGCGCGCGGCCGGGCTCGAGGGGGTGGA CGTCCGCGAGGCGCGCCCGGCACACCCGCGCTCGCGCGACCGCGCCGACCCGCTGCACGCGGCGCGCGCCGCCGAGGTGA CGCGGCTCCACCGGCTGCGCCGGGGCCGAGGCCGGGACTGA
Upstream 100 bases:
>100_bases GGGCGCGCTGGGCAGCGCCTGGGGTTCCGGCGGCGATGACATGGCGCGCTCTTCTTAATCCAGACACCCCCCGCCTGGCC GCTCAACCGCACGCGATCCG
Downstream 100 bases:
>100_bases AGAGGAAAGACCCCCTCCTCCCGCTCCCTGGTGCGGGAGGAGGGGGAGCGGCGGACGCACCCGCGCGGCCCGCCCGCCGC CAGCCCTGCTACGCCGGAGG
Product: methyltransferase small
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; Adenine Specific DNA-Methyltransferase; Polypeptide Chain Release Factor Methylase; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTRTEPTAGTPPRELVWRDATGEHRARWASGSAPPPARLGPAGDATRAGEALARARRGEGLVYAGDYHNARQLLAAMGRR LEHPAPRGAGLGAAFRAERERMRLEHEVLARLLVPVEPGWRIALRRAPDVAAACAEGLGPPPDGPALLPLRELLGLVAAH EWRRRGVEVPALGARVHPFHGVYAPIRGEYVDLVGAAAKERPLDGKRAFDVGTGTGVLALVLARAGARVIATDLEPRAVA CARENAARLGLAGQVEVVEADLFPEGLADVIVCNPPWIPGPARGPLERAVYDPGGAFLERLVRGLPAHLAPGGEAWIVLS DLAERLGLRPPGEVERLARAAGLEGVDVREARPAHPRSRDRADPLHAARAAEVTRLHRLRRGRGRD
Sequences:
>Translated_386_residues MTRTEPTAGTPPRELVWRDATGEHRARWASGSAPPPARLGPAGDATRAGEALARARRGEGLVYAGDYHNARQLLAAMGRR LEHPAPRGAGLGAAFRAERERMRLEHEVLARLLVPVEPGWRIALRRAPDVAAACAEGLGPPPDGPALLPLRELLGLVAAH EWRRRGVEVPALGARVHPFHGVYAPIRGEYVDLVGAAAKERPLDGKRAFDVGTGTGVLALVLARAGARVIATDLEPRAVA CARENAARLGLAGQVEVVEADLFPEGLADVIVCNPPWIPGPARGPLERAVYDPGGAFLERLVRGLPAHLAPGGEAWIVLS DLAERLGLRPPGEVERLARAAGLEGVDVREARPAHPRSRDRADPLHAARAAEVTRLHRLRRGRGRD >Mature_385_residues TRTEPTAGTPPRELVWRDATGEHRARWASGSAPPPARLGPAGDATRAGEALARARRGEGLVYAGDYHNARQLLAAMGRRL EHPAPRGAGLGAAFRAERERMRLEHEVLARLLVPVEPGWRIALRRAPDVAAACAEGLGPPPDGPALLPLRELLGLVAAHE WRRRGVEVPALGARVHPFHGVYAPIRGEYVDLVGAAAKERPLDGKRAFDVGTGTGVLALVLARAGARVIATDLEPRAVAC ARENAARLGLAGQVEVVEADLFPEGLADVIVCNPPWIPGPARGPLERAVYDPGGAFLERLVRGLPAHLAPGGEAWIVLSD LAERLGLRPPGEVERLARAAGLEGVDVREARPAHPRSRDRADPLHAARAAEVTRLHRLRRGRGRD
Specific function: Methylates The Translation Termination Release Factor Rf1 On Gln-235 And Rf2 On Gln-252. [C]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 41248; Mature: 41117
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTEPTAGTPPRELVWRDATGEHRARWASGSAPPPARLGPAGDATRAGEALARARRGEG CCCCCCCCCCCHHHHEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC LVYAGDYHNARQLLAAMGRRLEHPAPRGAGLGAAFRAERERMRLEHEVLARLLVPVEPGW CEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC RIALRRAPDVAAACAEGLGPPPDGPALLPLRELLGLVAAHEWRRRGVEVPALGARVHPFH EEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GVYAPIRGEYVDLVGAAAKERPLDGKRAFDVGTGTGVLALVLARAGARVIATDLEPRAVA CCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHH CARENAARLGLAGQVEVVEADLFPEGLADVIVCNPPWIPGPARGPLERAVYDPGGAFLER HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCHHHHHH LVRGLPAHLAPGGEAWIVLSDLAERLGLRPPGEVERLARAAGLEGVDVREARPAHPRSRD HHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RADPLHAARAAEVTRLHRLRRGRGRD CCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRTEPTAGTPPRELVWRDATGEHRARWASGSAPPPARLGPAGDATRAGEALARARRGEG CCCCCCCCCCHHHHEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC LVYAGDYHNARQLLAAMGRRLEHPAPRGAGLGAAFRAERERMRLEHEVLARLLVPVEPGW CEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC RIALRRAPDVAAACAEGLGPPPDGPALLPLRELLGLVAAHEWRRRGVEVPALGARVHPFH EEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GVYAPIRGEYVDLVGAAAKERPLDGKRAFDVGTGTGVLALVLARAGARVIATDLEPRAVA CCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHH CARENAARLGLAGQVEVVEADLFPEGLADVIVCNPPWIPGPARGPLERAVYDPGGAFLER HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCHHHHHH LVRGLPAHLAPGGEAWIVLSDLAERLGLRPPGEVERLARAAGLEGVDVREARPAHPRSRD HHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RADPLHAARAAEVTRLHRLRRGRGRD CCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA