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The map label for this gene is cheD1 [H]

Identifier: 220915748

GI number: 220915748

Start: 705527

End: 706042

Strand: Reverse

Name: cheD1 [H]

Synonym: A2cp1_0629

Alternate gene names: 220915748

Gene position: 706042-705527 (Counterclockwise)

Preceding gene: 220915749

Following gene: 220915747

Centisome position: 14.04

GC content: 75.78

Gene sequence:

>516_bases
GTGACCCGCACCACCGGCGCAGCGCCGGATCGAGCAGCGCCGGCGGCCGGGGAGACCCCGGGCGGCGGCGGCCGCGCCCA
GGTGTACCTGCACGCGGGCCAGATCGCCGTGGCGACCGAGCCGACCGCGATCGTCACCGTGCTCGGCTCGTGCGTGGCGG
TGTGCCTGCACGATCCGGTCGCGCGGGTGGGCGGGATGAACCACTTCCTGCTGCCGCTGCACGTCGAGCGCGAGCAGTCG
GCGCGCTTCGGCACGGTCGCGGTCCCGCAGCTCGTCGAGGCGGTGGAGCGAGCCGGGGCGCGGCGGGCGAGCCTGGTCGC
GAAGGTCTTCGGCGGCGCCAGCGTCATCGGCGCGTTCCGCGGCGCACGCAACCTCGGCGACGAGAACGTACAGCTGGCCC
TGCGCCTCCTCGAGGAGGCCCACATCCCGGTGCTCGACCGCGACGTGGGCGGCGCGCGGGGGCGCAAGCTCATCTTCCAC
GTGGACGACGGCGCCGCCTGGGTGCGGCAGCTCTAG

Upstream 100 bases:

>100_bases
GCGAGTCCGACCAGGCGGTGTTCGACCTGCTCTCGGCGCACGCGGGCCTGGCGCTCCACCTCCGCGCGCAGGCCGAGCGC
GCCGGCGCGGCGAGCTGACC

Downstream 100 bases:

>100_bases
GGAGCGGTGATGGACGAGCTCGAGATCGATCGCGAGGCGCTGCTCGCCACGTTCCTGGCGGAGGCGGACGAGACGTTCGC
GCACATGGAGCAGCAGCTCC

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVATEPTAIVTVLGSCVAVCLHDPVARVGGMNHFLLPLHVEREQS
ARFGTVAVPQLVEAVERAGARRASLVAKVFGGASVIGAFRGARNLGDENVQLALRLLEEAHIPVLDRDVGGARGRKLIFH
VDDGAAWVRQL

Sequences:

>Translated_171_residues
MTRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVATEPTAIVTVLGSCVAVCLHDPVARVGGMNHFLLPLHVEREQS
ARFGTVAVPQLVEAVERAGARRASLVAKVFGGASVIGAFRGARNLGDENVQLALRLLEEAHIPVLDRDVGGARGRKLIFH
VDDGAAWVRQL
>Mature_170_residues
TRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVATEPTAIVTVLGSCVAVCLHDPVARVGGMNHFLLPLHVEREQSA
RFGTVAVPQLVEAVERAGARRASLVAKVFGGASVIGAFRGARNLGDENVQLALRLLEEAHIPVLDRDVGGARGRKLIFHV
DDGAAWVRQL

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 17810; Mature: 17678

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVATEPTAIVTVLGSCVAVCLHDPV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHCHH
ARVGGMNHFLLPLHVEREQSARFGTVAVPQLVEAVERAGARRASLVAKVFGGASVIGAFR
HHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
GARNLGDENVQLALRLLEEAHIPVLDRDVGGARGRKLIFHVDDGAAWVRQL
HHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHCC
>Mature Secondary Structure 
TRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVATEPTAIVTVLGSCVAVCLHDPV
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHCHH
ARVGGMNHFLLPLHVEREQSARFGTVAVPQLVEAVERAGARRASLVAKVFGGASVIGAFR
HHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
GARNLGDENVQLALRLLEEAHIPVLDRDVGGARGRKLIFHVDDGAAWVRQL
HHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA