Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915712
Identifier: 220915712
GI number: 220915712
Start: 664814
End: 666052
Strand: Reverse
Name: 220915712
Synonym: A2cp1_0593
Alternate gene names: NA
Gene position: 666052-664814 (Counterclockwise)
Preceding gene: 220915714
Following gene: 220915705
Centisome position: 13.24
GC content: 71.91
Gene sequence:
>1239_bases ATGGCCCGCTACGAGACCCGCTCCTGGCCCGCCGACCCGTCCGCCCCCGGCGGACGCGCGGAGCGGCGTGCGTTCCGCTA CCGCGTGTTCTTTCCGGACCCCATCGCCAAGCTCCAGCCCGCCCTGCCGTCCGGCGTCGCGGCAGCCGTGTCGGTCTCCG AGCGCGCCGTCGATGCGCTGAACCGCGACCCGCCGCGCCTGGCCAGCCTGGAGGTGCTCGCCCGCCGGCTCCTCCGGGCC GAGTCCGTCGCGTCCTCCCGGATCGAAGGTCTGGTCCTGTCGCAGCGGCGCCTCGCGCGCGCCGAGGCCGAGGCACCCGA CGCCCGCGACGAGACCGCCCGATCCGTCCTCGGAAACGTCGCCGCCATGGAGCACGCGGTCGCGCTCGGCGCCGCGGCGA AACCCCTTCGGCTGCATGATCTGCTCGAGATCCACCGCCACTTGATGCTGGCGACCAATACACCCGAGATCGCCGGCAGG ATCCGCGACCGCCAGAACTGGATCGGCGGCAACGCGTTCAATCCCGGACGCGCCGATTTCGTCCCGCCAGCGCCCGAGCG GGTGAAGGCGCTGATGGAGGACCTGGTCGCGTTCATGAACCGCACGGACCTCCCGCCCGTGGTCCAGGCAGCCATCGCCC ACGCGCAGTTCGAGACCATCCACCCGTTCGCCGACGGCAACGGCCGCGTCGGCCGCGCGCTCATCCACGTCATGCTGCGC CGGCGCGGCCTCGCGCCGCGCTACGTTCCGCCCGTCAGCCTCGTCCTCGCTGCCGACGCGAAGGCGTACATCGGCGGGCT GACCGCGTTCCGCGAGGACCGGCCCGCCGACTGGATCCTCTCGTTCGCCGAGGCCATCGAGCGGGCCTCCGCGAAGGCCA GCGACCTCGCGCTACGCCTTGCAGAGCTTCAGGAACGCTGGCGAGAGCGTGCCGGTCGCCCGCGCCGCCATTCCAGCGCC GAGGCGCTCATCGTCGAGCTCCCCGCCCACCCCATCGTCACCGTCGCGACCGCCCAGAAGTTCCTCGACCGCTCCAAGCA GGCCGTGAACGAGGCCATCGCCACGCTCGCCGAGAAGGGCATCCTCCACGCGATCACCCTCGCGAAGCGGAACCGAGCCT GGGAAGCCCGCGACCTTTTCGACCTCATCAACGACTTCGAACACGACCTCGCGATCCCGACCGACGACGACGAGCCCTCC CGGCCGTCACCCCGCCGGAAGACGACCTCCAAGACCTGA
Upstream 100 bases:
>100_bases GGCGACACGGCCGATTCGAAACCCTGACCCGCGGCGCCCGTTGGTCAAGGTTCCGCACGAAACCTTGACTAAGGCTTCGC GCTGGTCAAGGTTTCTGAAG
Downstream 100 bases:
>100_bases CCGTCCTCGGTGTACCAAGACATCGCTGACGGAAATCGTCTCAGGACATCGCTGACAGGTCGGCCTGCCGCCGGGGCTCA CGGTTCCGGTTCGTCGCCCG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Filamentation Induced By Camp Protein Fic; Fic Protein Family; Xin-Antitoxin System Toxin Component Fic Family; Cell Filamentation CAMP-Inducing Protein Fic; Phage Protein Fic Family; Fic Family Protein; Fic-Family Protein; Fic Protein Family Protein
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MARYETRSWPADPSAPGGRAERRAFRYRVFFPDPIAKLQPALPSGVAAAVSVSERAVDALNRDPPRLASLEVLARRLLRA ESVASSRIEGLVLSQRRLARAEAEAPDARDETARSVLGNVAAMEHAVALGAAAKPLRLHDLLEIHRHLMLATNTPEIAGR IRDRQNWIGGNAFNPGRADFVPPAPERVKALMEDLVAFMNRTDLPPVVQAAIAHAQFETIHPFADGNGRVGRALIHVMLR RRGLAPRYVPPVSLVLAADAKAYIGGLTAFREDRPADWILSFAEAIERASAKASDLALRLAELQERWRERAGRPRRHSSA EALIVELPAHPIVTVATAQKFLDRSKQAVNEAIATLAEKGILHAITLAKRNRAWEARDLFDLINDFEHDLAIPTDDDEPS RPSPRRKTTSKT
Sequences:
>Translated_412_residues MARYETRSWPADPSAPGGRAERRAFRYRVFFPDPIAKLQPALPSGVAAAVSVSERAVDALNRDPPRLASLEVLARRLLRA ESVASSRIEGLVLSQRRLARAEAEAPDARDETARSVLGNVAAMEHAVALGAAAKPLRLHDLLEIHRHLMLATNTPEIAGR IRDRQNWIGGNAFNPGRADFVPPAPERVKALMEDLVAFMNRTDLPPVVQAAIAHAQFETIHPFADGNGRVGRALIHVMLR RRGLAPRYVPPVSLVLAADAKAYIGGLTAFREDRPADWILSFAEAIERASAKASDLALRLAELQERWRERAGRPRRHSSA EALIVELPAHPIVTVATAQKFLDRSKQAVNEAIATLAEKGILHAITLAKRNRAWEARDLFDLINDFEHDLAIPTDDDEPS RPSPRRKTTSKT >Mature_411_residues ARYETRSWPADPSAPGGRAERRAFRYRVFFPDPIAKLQPALPSGVAAAVSVSERAVDALNRDPPRLASLEVLARRLLRAE SVASSRIEGLVLSQRRLARAEAEAPDARDETARSVLGNVAAMEHAVALGAAAKPLRLHDLLEIHRHLMLATNTPEIAGRI RDRQNWIGGNAFNPGRADFVPPAPERVKALMEDLVAFMNRTDLPPVVQAAIAHAQFETIHPFADGNGRVGRALIHVMLRR RGLAPRYVPPVSLVLAADAKAYIGGLTAFREDRPADWILSFAEAIERASAKASDLALRLAELQERWRERAGRPRRHSSAE ALIVELPAHPIVTVATAQKFLDRSKQAVNEAIATLAEKGILHAITLAKRNRAWEARDLFDLINDFEHDLAIPTDDDEPSR PSPRRKTTSKT
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=166, Percent_Identity=34.3373493975904, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17544594, Length=171, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582217, Length=213, Percent_Identity=30.0469483568075, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45401; Mature: 45270
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYETRSWPADPSAPGGRAERRAFRYRVFFPDPIAKLQPALPSGVAAAVSVSERAVDAL CCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHH NRDPPRLASLEVLARRLLRAESVASSRIEGLVLSQRRLARAEAEAPDARDETARSVLGNV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAMEHAVALGAAAKPLRLHDLLEIHRHLMLATNTPEIAGRIRDRQNWIGGNAFNPGRADF HHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC VPPAPERVKALMEDLVAFMNRTDLPPVVQAAIAHAQFETIHPFADGNGRVGRALIHVMLR CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RRGLAPRYVPPVSLVLAADAKAYIGGLTAFREDRPADWILSFAEAIERASAKASDLALRL HCCCCCCCCCCHHEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHH AELQERWRERAGRPRRHSSAEALIVELPAHPIVTVATAQKFLDRSKQAVNEAIATLAEKG HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC ILHAITLAKRNRAWEARDLFDLINDFEHDLAIPTDDDEPSRPSPRRKTTSKT HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARYETRSWPADPSAPGGRAERRAFRYRVFFPDPIAKLQPALPSGVAAAVSVSERAVDAL CCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHH NRDPPRLASLEVLARRLLRAESVASSRIEGLVLSQRRLARAEAEAPDARDETARSVLGNV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAMEHAVALGAAAKPLRLHDLLEIHRHLMLATNTPEIAGRIRDRQNWIGGNAFNPGRADF HHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC VPPAPERVKALMEDLVAFMNRTDLPPVVQAAIAHAQFETIHPFADGNGRVGRALIHVMLR CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RRGLAPRYVPPVSLVLAADAKAYIGGLTAFREDRPADWILSFAEAIERASAKASDLALRL HCCCCCCCCCCHHEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHH AELQERWRERAGRPRRHSSAEALIVELPAHPIVTVATAQKFLDRSKQAVNEAIATLAEKG HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC ILHAITLAKRNRAWEARDLFDLINDFEHDLAIPTDDDEPSRPSPRRKTTSKT HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA