Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is tkt [H]
Identifier: 220915432
GI number: 220915432
Start: 345512
End: 347509
Strand: Reverse
Name: tkt [H]
Synonym: A2cp1_0311
Alternate gene names: 220915432
Gene position: 347509-345512 (Counterclockwise)
Preceding gene: 220915433
Following gene: 220915428
Centisome position: 6.91
GC content: 74.12
Gene sequence:
>1998_bases GTGCCGAACGCTCGCCCCGAGCTCGTCGAGAAGGCCGTGAACACCATCCGCATGCTCGCCGCCGACGGCGTGCAGCAGGC GAACAGCGGCCACCCCGGCATGCCCATGGGCGCCGCGGACATGGCCTTCGTCCTCTGGACGCGCCACCTGCGCTTCGACC CCGCGGAGCCGCGCTGGCTGGGCCGCGACCGGTTCCTCCTCTCGGCCGGCCACGGCTCGATGCTGCTGTACTCGCTGCTC CACCTGGCGGGCTTCGACTGCGCGCTCGAGGACCTGAAGCACTTCCGCCAGCTCCACTCGCGCACGCCCGGGCACCCCGA GTACGGCTTCCTGCCCGGCGTCGAGATCACGAGCGGCCCGCTCGGCCAGGGCTTCGCGAACGGCGTGGGCTTCGCGCTCG GCCACGCCATGCTCGCGGCGAAGCTCGGGCCCGGCAACCCGGTCTCGGACGCGTTCGTCTACGCGATCGTCTCCGACGGC GACCTGATGGAGGGCGTCTCGGCGGAGGCGGCCAGCTTCGCCGGCCACCACAAGCTCGGCCGGCTCGTCTACCTGTACGA CGACAACGGCATCACCATCGACGGCAAGACCAGCATCACCTTCTCCGGCGAGGACGTGACCCGGCGCTTCGAGGCCTACG GCTGGCACGTCCAGTCGGTGGACGGCCGCGACCACGACGGCATCGATCGCGCCCTCCAGGCGGCGAAGGCCGAGCTGGGC CGCCCCAGCCTCATCCGCGTGCACACCACCATCGGCTTCGGCTCCCCCGCGAAGGCCGGCAAGTCGAGCGTGCACGGCGC GCCGCTGGGCGAGGCGGAGCTCGAGGCCACCAAGAAGGCGCTGGGCTGGCCGCTCGAGCCGCGGTTCCTCGTCCCGGACG ACGTCCGCGCCTACTGGGCCGAGGTCCGCGCCGAGAAGGCCGCGCAGAAGCAGGCCTGGCGCGCGGCCGAGCAGGCCTGG CGCGCCGCCAACCCGGAGCAGGCGGCGCTGCTCGACGCGCACGTGGAGCGCTGGGTGCCGGAGCGGATCCTCGACCGCGC CCGCGCCGAGCTGCCCGCGCCCGACGCGACCCGCAAGGTCTCGCAGGCCATCCTGCAGAAGATCGCGCCGCTCGTGCCCT GCCTGGTGGGCGGGTCGGCCGACCTGGCCGAGTCGAACCTCACCGAGATCAAGGGCGCAGGCTCGGTGGCGCCGGGCAGC TTCGCCGGCCGCAACCTCCACTTCGGCATCCGCGAGCACGCCATGGGGGCGATCGCGAACGGCCTCGCGTACGACGGCCT GTTCGTCCCGTTCGTCGGCACGTTCCTGCAGTTCGCCGACTACATGCGCCCGCCGGTCCGGCTCGCCGCGCTCTCGAAGC TCCAGGCCGTCTACGTGTGGACGCACGACTCGATCTTCCTGGGCGAGGACGGCCCCACGCACCAGCCCATCGAGCACCTC ACCGCGCTGCGGGCCATCCCGAACCTGCACGTCTGCCGCCCGGCCGATCCGGAGGAGACCGCCGCCGCCTGGGCGCACGC GCTGCAGCGCCGCGACGGTCCCACCGCGCTCGTCCTCACCCGCCAGAAGCTCGCGCCGGTGAAGCGCTCGGTGCCGCTCG ATCCGGAGGCGATCCTCCGCGGCGGCTACCTGGTGGACGCGCCCGCGGGCGCCACGTTCACGCTCGTCGCCACCGGCTCG GAGGTGCCGCTCGCGCAGGCCGCGCTCGAGGCGCTCGCGAAGCAGGGCGTGGTGGGCCGGCTCGCGTCGATCCCGTGCCT GGAGTGCTTCCTCGCGCAGCCGAAGGCCTGGCGCGACGAGGTGGTGCCGCCCGGCCAGCGGGTGGCGGTGGTGGAGGCGG CGCGCGGCACCGAGTGGTGGCAGCTCGCCGGCCGCGACGGCCTGGTGCTCGGGATCGAGCGCTTCGGCTCGAGCGCGCCG GAGAAGGCGCTCGCCGAGGAGTACGGCTTCACGCCGGCGCAGGTCGCCGCGCGCGTGACGCGCTGGCTGGCGGGGTGA
Upstream 100 bases:
>100_bases CGGGGCTGACGTCGCCGGCGCTCGGGCTGACGCCCCCCTTGATCTCGACGGTGCGGTGGGCGATGTTCCGCACCTCTTCC CACCCCCGCGAGGAGTCCCC
Downstream 100 bases:
>100_bases GCGCTGCAGGGGGGCTCGCGGGGCCGCGCCGCGGAGGCGGGCCGTCGTCGAGGCGTGAGGCGCGCCCGGCGGGCCGCCAC GATGCGGCGGCCCGCCAGAC
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MPNARPELVEKAVNTIRMLAADGVQQANSGHPGMPMGAADMAFVLWTRHLRFDPAEPRWLGRDRFLLSAGHGSMLLYSLL HLAGFDCALEDLKHFRQLHSRTPGHPEYGFLPGVEITSGPLGQGFANGVGFALGHAMLAAKLGPGNPVSDAFVYAIVSDG DLMEGVSAEAASFAGHHKLGRLVYLYDDNGITIDGKTSITFSGEDVTRRFEAYGWHVQSVDGRDHDGIDRALQAAKAELG RPSLIRVHTTIGFGSPAKAGKSSVHGAPLGEAELEATKKALGWPLEPRFLVPDDVRAYWAEVRAEKAAQKQAWRAAEQAW RAANPEQAALLDAHVERWVPERILDRARAELPAPDATRKVSQAILQKIAPLVPCLVGGSADLAESNLTEIKGAGSVAPGS FAGRNLHFGIREHAMGAIANGLAYDGLFVPFVGTFLQFADYMRPPVRLAALSKLQAVYVWTHDSIFLGEDGPTHQPIEHL TALRAIPNLHVCRPADPEETAAAWAHALQRRDGPTALVLTRQKLAPVKRSVPLDPEAILRGGYLVDAPAGATFTLVATGS EVPLAQAALEALAKQGVVGRLASIPCLECFLAQPKAWRDEVVPPGQRVAVVEAARGTEWWQLAGRDGLVLGIERFGSSAP EKALAEEYGFTPAQVAARVTRWLAG
Sequences:
>Translated_665_residues MPNARPELVEKAVNTIRMLAADGVQQANSGHPGMPMGAADMAFVLWTRHLRFDPAEPRWLGRDRFLLSAGHGSMLLYSLL HLAGFDCALEDLKHFRQLHSRTPGHPEYGFLPGVEITSGPLGQGFANGVGFALGHAMLAAKLGPGNPVSDAFVYAIVSDG DLMEGVSAEAASFAGHHKLGRLVYLYDDNGITIDGKTSITFSGEDVTRRFEAYGWHVQSVDGRDHDGIDRALQAAKAELG RPSLIRVHTTIGFGSPAKAGKSSVHGAPLGEAELEATKKALGWPLEPRFLVPDDVRAYWAEVRAEKAAQKQAWRAAEQAW RAANPEQAALLDAHVERWVPERILDRARAELPAPDATRKVSQAILQKIAPLVPCLVGGSADLAESNLTEIKGAGSVAPGS FAGRNLHFGIREHAMGAIANGLAYDGLFVPFVGTFLQFADYMRPPVRLAALSKLQAVYVWTHDSIFLGEDGPTHQPIEHL TALRAIPNLHVCRPADPEETAAAWAHALQRRDGPTALVLTRQKLAPVKRSVPLDPEAILRGGYLVDAPAGATFTLVATGS EVPLAQAALEALAKQGVVGRLASIPCLECFLAQPKAWRDEVVPPGQRVAVVEAARGTEWWQLAGRDGLVLGIERFGSSAP EKALAEEYGFTPAQVAARVTRWLAG >Mature_664_residues PNARPELVEKAVNTIRMLAADGVQQANSGHPGMPMGAADMAFVLWTRHLRFDPAEPRWLGRDRFLLSAGHGSMLLYSLLH LAGFDCALEDLKHFRQLHSRTPGHPEYGFLPGVEITSGPLGQGFANGVGFALGHAMLAAKLGPGNPVSDAFVYAIVSDGD LMEGVSAEAASFAGHHKLGRLVYLYDDNGITIDGKTSITFSGEDVTRRFEAYGWHVQSVDGRDHDGIDRALQAAKAELGR PSLIRVHTTIGFGSPAKAGKSSVHGAPLGEAELEATKKALGWPLEPRFLVPDDVRAYWAEVRAEKAAQKQAWRAAEQAWR AANPEQAALLDAHVERWVPERILDRARAELPAPDATRKVSQAILQKIAPLVPCLVGGSADLAESNLTEIKGAGSVAPGSF AGRNLHFGIREHAMGAIANGLAYDGLFVPFVGTFLQFADYMRPPVRLAALSKLQAVYVWTHDSIFLGEDGPTHQPIEHLT ALRAIPNLHVCRPADPEETAAAWAHALQRRDGPTALVLTRQKLAPVKRSVPLDPEAILRGGYLVDAPAGATFTLVATGSE VPLAQAALEALAKQGVVGRLASIPCLECFLAQPKAWRDEVVPPGQRVAVVEAARGTEWWQLAGRDGLVLGIERFGSSAPE KALAEEYGFTPAQVAARVTRWLAG
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=490, Percent_Identity=26.734693877551, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4507521, Length=490, Percent_Identity=26.734693877551, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI133778974, Length=578, Percent_Identity=23.7024221453287, Blast_Score=121, Evalue=3e-27, Organism=Homo sapiens, GI225637459, Length=589, Percent_Identity=21.2224108658744, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI225637461, Length=499, Percent_Identity=22.2444889779559, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI225637463, Length=499, Percent_Identity=22.2444889779559, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI48994911, Length=672, Percent_Identity=46.875, Blast_Score=585, Evalue=1e-168, Organism=Escherichia coli, GI1788808, Length=662, Percent_Identity=46.9788519637462, Blast_Score=562, Evalue=1e-161, Organism=Caenorhabditis elegans, GI17539652, Length=675, Percent_Identity=25.7777777777778, Blast_Score=144, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6325331, Length=669, Percent_Identity=44.2451420029895, Blast_Score=521, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6319593, Length=665, Percent_Identity=42.7067669172932, Blast_Score=498, Evalue=1e-141, Organism=Drosophila melanogaster, GI45551847, Length=496, Percent_Identity=26.6129032258064, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI45550715, Length=496, Percent_Identity=26.6129032258064, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24645119, Length=468, Percent_Identity=26.7094017094017, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24666278, Length=492, Percent_Identity=25, Blast_Score=129, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 71417; Mature: 71286
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNARPELVEKAVNTIRMLAADGVQQANSGHPGMPMGAADMAFVLWTRHLRFDPAEPRWL CCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GRDRFLLSAGHGSMLLYSLLHLAGFDCALEDLKHFRQLHSRTPGHPEYGFLPGVEITSGP CCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LGQGFANGVGFALGHAMLAAKLGPGNPVSDAFVYAIVSDGDLMEGVSAEAASFAGHHKLG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHCHHCCC RLVYLYDDNGITIDGKTSITFSGEDVTRRFEAYGWHVQSVDGRDHDGIDRALQAAKAELG CEEEEECCCCEEECCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCC RPSLIRVHTTIGFGSPAKAGKSSVHGAPLGEAELEATKKALGWPLEPRFLVPDDVRAYWA CCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHH EVRAEKAAQKQAWRAAEQAWRAANPEQAALLDAHVERWVPERILDRARAELPAPDATRKV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SQAILQKIAPLVPCLVGGSADLAESNLTEIKGAGSVAPGSFAGRNLHFGIREHAMGAIAN HHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHC GLAYDGLFVPFVGTFLQFADYMRPPVRLAALSKLQAVYVWTHDSIFLGEDGPTHQPIEHL CHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEEECCEEEECCCCCCCCHHHHH TALRAIPNLHVCRPADPEETAAAWAHALQRRDGPTALVLTRQKLAPVKRSVPLDPEAILR HHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCHHHHHC GGYLVDAPAGATFTLVATGSEVPLAQAALEALAKQGVVGRLASIPCLECFLAQPKAWRDE CCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCHHHC VVPPGQRVAVVEAARGTEWWQLAGRDGLVLGIERFGSSAPEKALAEEYGFTPAQVAARVT CCCCCCEEEEEEECCCCHHHEECCCCCEEEEHHHHCCCCCHHHHHHHHCCCHHHHHHHHH RWLAG HHHCC >Mature Secondary Structure PNARPELVEKAVNTIRMLAADGVQQANSGHPGMPMGAADMAFVLWTRHLRFDPAEPRWL CCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GRDRFLLSAGHGSMLLYSLLHLAGFDCALEDLKHFRQLHSRTPGHPEYGFLPGVEITSGP CCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LGQGFANGVGFALGHAMLAAKLGPGNPVSDAFVYAIVSDGDLMEGVSAEAASFAGHHKLG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHCHHCCC RLVYLYDDNGITIDGKTSITFSGEDVTRRFEAYGWHVQSVDGRDHDGIDRALQAAKAELG CEEEEECCCCEEECCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCC RPSLIRVHTTIGFGSPAKAGKSSVHGAPLGEAELEATKKALGWPLEPRFLVPDDVRAYWA CCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHH EVRAEKAAQKQAWRAAEQAWRAANPEQAALLDAHVERWVPERILDRARAELPAPDATRKV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SQAILQKIAPLVPCLVGGSADLAESNLTEIKGAGSVAPGSFAGRNLHFGIREHAMGAIAN HHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHC GLAYDGLFVPFVGTFLQFADYMRPPVRLAALSKLQAVYVWTHDSIFLGEDGPTHQPIEHL CHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEEECCEEEECCCCCCCCHHHHH TALRAIPNLHVCRPADPEETAAAWAHALQRRDGPTALVLTRQKLAPVKRSVPLDPEAILR HHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCHHHHHC GGYLVDAPAGATFTLVATGSEVPLAQAALEALAKQGVVGRLASIPCLECFLAQPKAWRDE CCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCHHHC VVPPGQRVAVVEAARGTEWWQLAGRDGLVLGIERFGSSAPEKALAEEYGFTPAQVAARVT CCCCCCEEEEEEECCCCHHHEECCCCCEEEEHHHHCCCCCHHHHHHHHCCCHHHHHHHHH RWLAG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]