Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220915367
Identifier: 220915367
GI number: 220915367
Start: 263961
End: 265130
Strand: Reverse
Name: 220915367
Synonym: A2cp1_0246
Alternate gene names: NA
Gene position: 265130-263961 (Counterclockwise)
Preceding gene: 220915370
Following gene: 220915363
Centisome position: 5.27
GC content: 74.96
Gene sequence:
>1170_bases ATGTCCCGCACGCGCCTGGCCGTCCTTGCGCTCGCCCTGTCCCCGCTCGTCCTGGTCGCCTGCAGCAACGGCGACGGCTC CTCCGCAGCGGCCTCCGACGCGGTCCGTGCCCCGCCCGCCGCGGGTTCACCGAGCGCGCATGGCGCCGGCATGGATCCCC ATTCCATGGCAGGAGGCAAGAAGATCCTGGGCGTGACCACCCGGAACCTGTACCTCGGCGCCGATCTCGGGCCGGTCATG GCCGCCGCCACCCCGGCGGCGTTCGTCGCGGCGACGACCGCGGTGTGGGTCACCGTGCAGGCGAACGACTTCCACGTGCG CGCGGAGGCGATCGCCGACGAGCTGGCCGCCACGCGGCCCGGCCTGGTCGGGCTCCAGGAGGCGTACCTCTGGCGCGTGC AGGACCCGGGCGACTTCCTCGCCGGCGGAACCACCCCCGCCACCACGGTCGCGTACGACTACGTCCAGGACCTCCTCGAC GCGCTCGCCGCGCGCGACCTCCACTACGTGGTCGCGGCCGAGGTGACGCTGTTCGACTTCGAGGCGCCGGTGGCGACCGG GCAGGACGTCCGCATGACGGATCGCGGCGTGATCCTGGCGCGGAGCGATCTCGCCACCGCGCTGCCGACGGGCGGCGTGT ACGCGACGCTCCTGCCCGTGACCGTGCTCGGGAACCCGGTGCAGGTGAAGCGGGGCTGGGTGTCGGTGGACGCGAGGTAC CGCGGCGAGTGGCTGCGCTTCGTCTCGACGCACCTCGAGGCCTACCACGCGGGCGTGCGCACCGCCCAGGCGGCGGAGCT CGCCGGCGCGCTCGCCGCCGAGACGCGCCCGGTGGTGCTGGTCGGCGATCTCAACTCCCAGCCCGGCACCGAGGGCGAGG CCGTGCTGGCCGCCGCCGGGTTCAGCGACGTCTGGGCGGCGGTGAACGGCGACGCGCCCGGGCTCACCTGCTGCTTCCCC GAGGACCTGCGCATCGGCCCGGGCGACCCCGGCTTCGCCGACCTGTCCACGCGCATCGACTACGTGCTCGTGCGCGGCCC GGTGGAGCCGTGGAGCGCGGAGGTGGTGGGCGAGACCGCCGACGAGCGGGTGGGTGGCCTGTGGCCGAGCGATCACGCGG GGGTGGCGGCAGAGGTGCGCGTGACCGACGGGCGGCACGCGGGCGAGTGA
Upstream 100 bases:
>100_bases GGGGCGGCCCGCCCGGCGCGTCGGGCCAGCGCACCGGCGGTGCTACGTTCCCATCCACATTCCACACGCCCGGCTCCTGA CCCCACCGCCGGAGGTGACC
Downstream 100 bases:
>100_bases TCACCGCGGCCCGGGCTGCCGCCGCGGGCGCGCGCCCGAGGCCAGGCGCGGGTCGGCCTGGCCGGCGGCGCGGTCGCGGG CCATGGGCGCGTCCAGGAAC
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSRTRLAVLALALSPLVLVACSNGDGSSAAASDAVRAPPAAGSPSAHGAGMDPHSMAGGKKILGVTTRNLYLGADLGPVM AAATPAAFVAATTAVWVTVQANDFHVRAEAIADELAATRPGLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLD ALAARDLHYVVAAEVTLFDFEAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLPVTVLGNPVQVKRGWVSVDARY RGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVVLVGDLNSQPGTEGEAVLAAAGFSDVWAAVNGDAPGLTCCFP EDLRIGPGDPGFADLSTRIDYVLVRGPVEPWSAEVVGETADERVGGLWPSDHAGVAAEVRVTDGRHAGE
Sequences:
>Translated_389_residues MSRTRLAVLALALSPLVLVACSNGDGSSAAASDAVRAPPAAGSPSAHGAGMDPHSMAGGKKILGVTTRNLYLGADLGPVM AAATPAAFVAATTAVWVTVQANDFHVRAEAIADELAATRPGLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLD ALAARDLHYVVAAEVTLFDFEAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLPVTVLGNPVQVKRGWVSVDARY RGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVVLVGDLNSQPGTEGEAVLAAAGFSDVWAAVNGDAPGLTCCFP EDLRIGPGDPGFADLSTRIDYVLVRGPVEPWSAEVVGETADERVGGLWPSDHAGVAAEVRVTDGRHAGE >Mature_388_residues SRTRLAVLALALSPLVLVACSNGDGSSAAASDAVRAPPAAGSPSAHGAGMDPHSMAGGKKILGVTTRNLYLGADLGPVMA AATPAAFVAATTAVWVTVQANDFHVRAEAIADELAATRPGLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLDA LAARDLHYVVAAEVTLFDFEAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLPVTVLGNPVQVKRGWVSVDARYR GEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVVLVGDLNSQPGTEGEAVLAAAGFSDVWAAVNGDAPGLTCCFPE DLRIGPGDPGFADLSTRIDYVLVRGPVEPWSAEVVGETADERVGGLWPSDHAGVAAEVRVTDGRHAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40182; Mature: 40050
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTRLAVLALALSPLVLVACSNGDGSSAAASDAVRAPPAAGSPSAHGAGMDPHSMAGGK CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC KILGVTTRNLYLGADLGPVMAAATPAAFVAATTAVWVTVQANDFHVRAEAIADELAATRP EEEEEEEEEEEEECCCCHHHHHCCCHHHHEEEEEEEEEEECCCEEEEHHHHHHHHHHCCC GLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLDALAARDLHYVVAAEVTLFDF CCCEECEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEC EAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLPVTVLGNPVQVKRGWVSVDARY CCCCCCCCCEEEECCCEEEEECCCHHHCCCCCCCEEEEEHHHCCCCEEEECCEEEECCHH RGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVVLVGDLNSQPGTEGEAVLAAAG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECC FSDVWAAVNGDAPGLTCCFPEDLRIGPGDPGFADLSTRIDYVLVRGPVEPWSAEVVGETA CHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCH DERVGGLWPSDHAGVAAEVRVTDGRHAGE HHHHCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure SRTRLAVLALALSPLVLVACSNGDGSSAAASDAVRAPPAAGSPSAHGAGMDPHSMAGGK CCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC KILGVTTRNLYLGADLGPVMAAATPAAFVAATTAVWVTVQANDFHVRAEAIADELAATRP EEEEEEEEEEEEECCCCHHHHHCCCHHHHEEEEEEEEEEECCCEEEEHHHHHHHHHHCCC GLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLDALAARDLHYVVAAEVTLFDF CCCEECEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEC EAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLPVTVLGNPVQVKRGWVSVDARY CCCCCCCCCEEEECCCEEEEECCCHHHCCCCCCCEEEEEHHHCCCCEEEECCEEEECCHH RGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVVLVGDLNSQPGTEGEAVLAAAG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECC FSDVWAAVNGDAPGLTCCFPEDLRIGPGDPGFADLSTRIDYVLVRGPVEPWSAEVVGETA CHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCH DERVGGLWPSDHAGVAAEVRVTDGRHAGE HHHHCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA