Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915363
Identifier: 220915363
GI number: 220915363
Start: 259892
End: 260788
Strand: Reverse
Name: 220915363
Synonym: A2cp1_0242
Alternate gene names: NA
Gene position: 260788-259892 (Counterclockwise)
Preceding gene: 220915367
Following gene: 220915361
Centisome position: 5.19
GC content: 73.36
Gene sequence:
>897_bases ATGACCGCTCCGCGTCAGGTCCTCCCGGGCGTCACGTACCTCGTGACGCGCCGCTGCTTCCAGCGCATGTTCCTGCTCCG CCCCTCACCCGCGACGAACGCGATCTTCCTGTACGTGCTCGCCGTCGCCGCGCGGCGGTACGGGATCCTGGTGCACGCGT TCTGCGTGATGTCGAACCACTTCCACCTGGTCGTCACCGACGTGAACGCGCGCCTGCCAGAGTTCGAGCAGTACCTGAAC GCGCTCGTGGCCCGGGCGGTGAACGCCTCGCTCGGCCGCTGGGAGTCGTTCTGGGCGCCGGGCAGCTACAGCGCCGTGGC GCTCTCGTCGCCGCAGGACGTGCTCGAGAAGGTCGCCTACGTCCTCACGAACCCGGTGAAGGCCGGGCTGGTCGCCTCCG CCAAGGAGTGGCCAGGGCTCTGGTCGGCGCCGGAGTCGATCGGCGCGGGCGCGTTACGGGTGACGCGACCGGATGGGTTC TTCCGCCGGAGCGGTCCGATGCCGGAAGTCGTCGAGCTCGCGCTCGTGCCGCCGCCTGGGTTCGAGCCTGCGGATGCGTT CCGCTCGCTGCTCGTCGACGCGATCGCGGCGCGGGAGCGCGAGGTCGCCCACGCGCACGCGCTGGCCGGCATCGGGTTCG TGGGCGCGCGGCGGGTGCTCGCGCAGCGACCCACGGCCCGCCCGCCGGAGCCGCCGCCGATGCGCGGCCTCCGCCCACGG GTGGCGGCGCGAGACCGCTGGAAGCGGATCGAGGCGATCGGGCGGCTGGTCGGGTTCCTGCGCGCGTACCGGGAGGCTTG GCGCGCGCGACGCGCCGGGCGCTCCGGCGTGATCTTCCCGGCCGGCACGTACCTGCTGCGCGTCCTGCACGGCGTTCCCT GCGCCAGCTTCGGCTGA
Upstream 100 bases:
>100_bases AGGGGTCCGATCCGCGGACCACGGCACGCCCCGCCCATTGGCTTCGCCCAAGGATCACGGGGCCGGCCGCGCGGCACGCC GCCTGCCTTGCACCCGCGCC
Downstream 100 bases:
>100_bases GCGCCCGCCCTCGTCCCCGTCCGCGCGCTCAGGCGCGGCCCGCAGGCGTGGCGAGCGGCGACCGCCAAGCGAGGTCGGAG CCGCCGAGTGCGCAGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTAPRQVLPGVTYLVTRRCFQRMFLLRPSPATNAIFLYVLAVAARRYGILVHAFCVMSNHFHLVVTDVNARLPEFEQYLN ALVARAVNASLGRWESFWAPGSYSAVALSSPQDVLEKVAYVLTNPVKAGLVASAKEWPGLWSAPESIGAGALRVTRPDGF FRRSGPMPEVVELALVPPPGFEPADAFRSLLVDAIAAREREVAHAHALAGIGFVGARRVLAQRPTARPPEPPPMRGLRPR VAARDRWKRIEAIGRLVGFLRAYREAWRARRAGRSGVIFPAGTYLLRVLHGVPCASFG
Sequences:
>Translated_298_residues MTAPRQVLPGVTYLVTRRCFQRMFLLRPSPATNAIFLYVLAVAARRYGILVHAFCVMSNHFHLVVTDVNARLPEFEQYLN ALVARAVNASLGRWESFWAPGSYSAVALSSPQDVLEKVAYVLTNPVKAGLVASAKEWPGLWSAPESIGAGALRVTRPDGF FRRSGPMPEVVELALVPPPGFEPADAFRSLLVDAIAAREREVAHAHALAGIGFVGARRVLAQRPTARPPEPPPMRGLRPR VAARDRWKRIEAIGRLVGFLRAYREAWRARRAGRSGVIFPAGTYLLRVLHGVPCASFG >Mature_297_residues TAPRQVLPGVTYLVTRRCFQRMFLLRPSPATNAIFLYVLAVAARRYGILVHAFCVMSNHFHLVVTDVNARLPEFEQYLNA LVARAVNASLGRWESFWAPGSYSAVALSSPQDVLEKVAYVLTNPVKAGLVASAKEWPGLWSAPESIGAGALRVTRPDGFF RRSGPMPEVVELALVPPPGFEPADAFRSLLVDAIAAREREVAHAHALAGIGFVGARRVLAQRPTARPPEPPPMRGLRPRV AARDRWKRIEAIGRLVGFLRAYREAWRARRAGRSGVIFPAGTYLLRVLHGVPCASFG
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32737; Mature: 32605
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPRQVLPGVTYLVTRRCFQRMFLLRPSPATNAIFLYVLAVAARRYGILVHAFCVMSNH CCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FHLVVTDVNARLPEFEQYLNALVARAVNASLGRWESFWAPGSYSAVALSSPQDVLEKVAY CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEECCHHHHHHHHHH VLTNPVKAGLVASAKEWPGLWSAPESIGAGALRVTRPDGFFRRSGPMPEVVELALVPPPG HHHCCHHHHHHHCHHHCCCCCCCCHHHCCCCEEEECCCCCHHCCCCCCHHHEEEECCCCC FEPADAFRSLLVDAIAAREREVAHAHALAGIGFVGARRVLAQRPTARPPEPPPMRGLRPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH VAARDRWKRIEAIGRLVGFLRAYREAWRARRAGRSGVIFPAGTYLLRVLHGVPCASFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAPRQVLPGVTYLVTRRCFQRMFLLRPSPATNAIFLYVLAVAARRYGILVHAFCVMSNH CCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FHLVVTDVNARLPEFEQYLNALVARAVNASLGRWESFWAPGSYSAVALSSPQDVLEKVAY CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEECCHHHHHHHHHH VLTNPVKAGLVASAKEWPGLWSAPESIGAGALRVTRPDGFFRRSGPMPEVVELALVPPPG HHHCCHHHHHHHCHHHCCCCCCCCHHHCCCCEEEECCCCCHHCCCCCCHHHEEEECCCCC FEPADAFRSLLVDAIAAREREVAHAHALAGIGFVGARRVLAQRPTARPPEPPPMRGLRPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH VAARDRWKRIEAIGRLVGFLRAYREAWRARRAGRSGVIFPAGTYLLRVLHGVPCASFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA