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The map label for this gene is ywbG [H]

Identifier: 220915220

GI number: 220915220

Start: 109623

End: 110297

Strand: Reverse

Name: ywbG [H]

Synonym: A2cp1_0099

Alternate gene names: 220915220

Gene position: 110297-109623 (Counterclockwise)

Preceding gene: 220915221

Following gene: 220915218

Centisome position: 2.19

GC content: 78.81

Gene sequence:

>675_bases
GTGATCGCCGCCGCCTGGATCGCCGTCACCGCCGCGCTGTACGCGGCCGCCCGCGCGCTGCACCGTCGCTTCCCGCGGCC
GTGGCTCACGCCGCTGCTGGTCGTGCCGGGCGCGCTCGCGGCGCTCCTGCTCGCCGCGCGCGTGCCGTACCCGGGCTACA
TGCAGGGCGGGCGGCTCCTGGTGGACCTCCTCGGCCCGGCCACGGTGGCGTTCGCGCTGCCGCTCCACCGGCACGCGGGC
CTCCTGCGCCGGCACGCCGCCGAGCTCTGCGCCGGGATCCTGGCCGGCTGCGCGGTGGCGGTCGGGAGCTCGTTCCTGCT
CGCCCGCGCGCTGGGCCTCGCCCGCCCGCTCGCGCTCAGCCTCGCGCCGCGCTCCATCACCACGCCGTTCGCGATGCAGG
TGGCGGGCGACCTGGGCGGCGTGCCGGCGCTGGCGGCGGTGTTCGTGATCCTCACCGCGGTGGTCGGCCTGGTGGTGGGG
CAGCTCCTGGTGCGCTGGCTGCCGCTCCGGAGCCCGGTGGCGCGCGGCGCGCTGTTCGGCATGGGCGCGCACGCCGCCGG
CACCGCGCAGGCGATGGAGCTGGGGCGCGTCGAGGGCGCCGTCGCCGGGGTGGTGATGATCGTCGCCGGCCTGGGCGTGC
TGGTCGCGACGCCGCTCCTCCGGCTGGCGCTCTAG

Upstream 100 bases:

>100_bases
GGGCCCGCGCGCTCGCGGTGGTGGCGGTGAGCACGGTGCTCGTGATGGCGGTGACCGGGGCCACGGTGGAGTGGCTGGCG
CGCCGCCGCGAGGAGGCGCC

Downstream 100 bases:

>100_bases
CCGCGCCCCGCGGTGGTCGCGGCCCGCCCTCGCGGCGACCGACTCCACGGCGGGGCACCGCACCCCCACGCGCGGAACGT
TCGGGCGGGGGCTTGCTGGC

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIAAAWIAVTAALYAAARALHRRFPRPWLTPLLVVPGALAALLLAARVPYPGYMQGGRLLVDLLGPATVAFALPLHRHAG
LLRRHAAELCAGILAGCAVAVGSSFLLARALGLARPLALSLAPRSITTPFAMQVAGDLGGVPALAAVFVILTAVVGLVVG
QLLVRWLPLRSPVARGALFGMGAHAAGTAQAMELGRVEGAVAGVVMIVAGLGVLVATPLLRLAL

Sequences:

>Translated_224_residues
MIAAAWIAVTAALYAAARALHRRFPRPWLTPLLVVPGALAALLLAARVPYPGYMQGGRLLVDLLGPATVAFALPLHRHAG
LLRRHAAELCAGILAGCAVAVGSSFLLARALGLARPLALSLAPRSITTPFAMQVAGDLGGVPALAAVFVILTAVVGLVVG
QLLVRWLPLRSPVARGALFGMGAHAAGTAQAMELGRVEGAVAGVVMIVAGLGVLVATPLLRLAL
>Mature_224_residues
MIAAAWIAVTAALYAAARALHRRFPRPWLTPLLVVPGALAALLLAARVPYPGYMQGGRLLVDLLGPATVAFALPLHRHAG
LLRRHAAELCAGILAGCAVAVGSSFLLARALGLARPLALSLAPRSITTPFAMQVAGDLGGVPALAAVFVILTAVVGLVVG
QLLVRWLPLRSPVARGALFGMGAHAAGTAQAMELGRVEGAVAGVVMIVAGLGVLVATPLLRLAL

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=222, Percent_Identity=34.6846846846847, Blast_Score=123, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 22806; Mature: 22806

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAAWIAVTAALYAAARALHRRFPRPWLTPLLVVPGALAALLLAARVPYPGYMQGGRLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VDLLGPATVAFALPLHRHAGLLRRHAAELCAGILAGCAVAVGSSFLLARALGLARPLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPRSITTPFAMQVAGDLGGVPALAAVFVILTAVVGLVVGQLLVRWLPLRSPVARGALFG
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
MGAHAAGTAQAMELGRVEGAVAGVVMIVAGLGVLVATPLLRLAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAAAWIAVTAALYAAARALHRRFPRPWLTPLLVVPGALAALLLAARVPYPGYMQGGRLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VDLLGPATVAFALPLHRHAGLLRRHAAELCAGILAGCAVAVGSSFLLARALGLARPLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPRSITTPFAMQVAGDLGGVPALAAVFVILTAVVGLVVGQLLVRWLPLRSPVARGALFG
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
MGAHAAGTAQAMELGRVEGAVAGVVMIVAGLGVLVATPLLRLAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]