Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220915164
Identifier: 220915164
GI number: 220915164
Start: 43669
End: 44658
Strand: Reverse
Name: 220915164
Synonym: A2cp1_0042
Alternate gene names: NA
Gene position: 44658-43669 (Counterclockwise)
Preceding gene: 220915167
Following gene: 220915163
Centisome position: 0.89
GC content: 79.19
Gene sequence:
>990_bases ATGCCCCGCCCCGATCCGTTCGTCCCCCCCGAGCTGCACGTCGTGTTCGGCGCCGGCCAGGTCGGCCGGCGCCTCGCGCG CGAGCTGCTCGCCCTCGGCCACCGGGTCCGCCTGATCCGGCGCGGCCCGCCCGGACCGGAGCTCCCCGGCCTGCGGTGGC TGAGCGGCGACGCCGCCGACCCGCTGTTCGCGGGCGAGGCGTGCCGCGGCGCCGACGTGGTCTACGACTGCACCAACCCG CCCGACTACCACCGCTGGGACGAGCTGCTCGTCCCGCTCCGGCGAGGGATCCGCGACGCCGCCGCTCGCGCCGGCGCGCG CCTCGTCGCGCTCGACTGCCTGTACATGTACGGGCGGCCGGCCGCCTCGCCGTTCGACGAGGACGCGCCGCTCGCGCCCT GCAGCCACAAGGGCGAGCTGCGCGCGCTCCTGGCGCGCGAGCTGCTCGAGGCCCACGCCCGCGGCGACCTGCGCGCGACC ACCGGCCGGGCCTCCGACTTCTTCGGCCCCGGCGCCGGCGCGGCCGCGCTGCTCGGCGACCGGCTCGCGGCGCGGCTCCG CGCCGGGAAGCCGTTCGAGGCGTTCGGCGACCCCGACCTGCCGCACGCGTACTCCTACGTCGCCGACGTCGCGCGCGGCC TCGCGGTGCTCGGCACGCACGAGGCCGCGCTCGGGAGGGCGTGGCACCTGCCCGTCTCCTGGACCGGCAGCACCCGCGGC CTGGTGGAGGCGGTCGGCGCCGCGCTCGGCCGGCCCGCCCGGCTCCGCATCGTCCCCGACTGGCTGCTGCGGGTGGGCGG CCTCCTCGACCCGACGCTCGGCGCCGCGGTGGAGATGACCTACCAGTGGAAGGTGCCGTACGTCCCCGACGACCGGCGCT TCCGCGCCGCGTTCTCCGTCGAGCCCACCCCCGCCGCCGAGGCGGTGGCCGCGACCGCGCGAGCCATCCTGGGCGCCGAG GCCCCCGCGGGACGGCGCGACGCGGCGTGA
Upstream 100 bases:
>100_bases GGCGGGCGGAGGCCTTTGCATGTCCGCAAGGCTACCCGGCGAATTCGCCGCGTGCACCGCGTTTTCGCGGGCCGTAGGCT TCCGCTCGAGAGGAGCCCGC
Downstream 100 bases:
>100_bases TCGCGCCCGACGACGATGCGTCCCCGCGGCTCCCGCGCCGATGGTAGCGTGCGCGCCCTGGCCGACGCCGCGCCGCCTCG GAGCCTCCGCGATGAACCTC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPRPDPFVPPELHVVFGAGQVGRRLARELLALGHRVRLIRRGPPGPELPGLRWLSGDAADPLFAGEACRGADVVYDCTNP PDYHRWDELLVPLRRGIRDAAARAGARLVALDCLYMYGRPAASPFDEDAPLAPCSHKGELRALLARELLEAHARGDLRAT TGRASDFFGPGAGAAALLGDRLAARLRAGKPFEAFGDPDLPHAYSYVADVARGLAVLGTHEAALGRAWHLPVSWTGSTRG LVEAVGAALGRPARLRIVPDWLLRVGGLLDPTLGAAVEMTYQWKVPYVPDDRRFRAAFSVEPTPAAEAVAATARAILGAE APAGRRDAA
Sequences:
>Translated_329_residues MPRPDPFVPPELHVVFGAGQVGRRLARELLALGHRVRLIRRGPPGPELPGLRWLSGDAADPLFAGEACRGADVVYDCTNP PDYHRWDELLVPLRRGIRDAAARAGARLVALDCLYMYGRPAASPFDEDAPLAPCSHKGELRALLARELLEAHARGDLRAT TGRASDFFGPGAGAAALLGDRLAARLRAGKPFEAFGDPDLPHAYSYVADVARGLAVLGTHEAALGRAWHLPVSWTGSTRG LVEAVGAALGRPARLRIVPDWLLRVGGLLDPTLGAAVEMTYQWKVPYVPDDRRFRAAFSVEPTPAAEAVAATARAILGAE APAGRRDAA >Mature_328_residues PRPDPFVPPELHVVFGAGQVGRRLARELLALGHRVRLIRRGPPGPELPGLRWLSGDAADPLFAGEACRGADVVYDCTNPP DYHRWDELLVPLRRGIRDAAARAGARLVALDCLYMYGRPAASPFDEDAPLAPCSHKGELRALLARELLEAHARGDLRATT GRASDFFGPGAGAAALLGDRLAARLRAGKPFEAFGDPDLPHAYSYVADVARGLAVLGTHEAALGRAWHLPVSWTGSTRGL VEAVGAALGRPARLRIVPDWLLRVGGLLDPTLGAAVEMTYQWKVPYVPDDRRFRAAFSVEPTPAAEAVAATARAILGAEA PAGRRDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35132; Mature: 35000
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPDPFVPPELHVVFGAGQVGRRLARELLALGHRVRLIRRGPPGPELPGLRWLSGDAAD CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCCCC PLFAGEACRGADVVYDCTNPPDYHRWDELLVPLRRGIRDAAARAGARLVALDCLYMYGRP CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC AASPFDEDAPLAPCSHKGELRALLARELLEAHARGDLRATTGRASDFFGPGAGAAALLGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHH RLAARLRAGKPFEAFGDPDLPHAYSYVADVARGLAVLGTHEAALGRAWHLPVSWTGSTRG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEECCEEECCCCHH LVEAVGAALGRPARLRIVPDWLLRVGGLLDPTLGAAVEMTYQWKVPYVPDDRRFRAAFSV HHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEC EPTPAAEAVAATARAILGAEAPAGRRDAA CCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PRPDPFVPPELHVVFGAGQVGRRLARELLALGHRVRLIRRGPPGPELPGLRWLSGDAAD CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCCCC PLFAGEACRGADVVYDCTNPPDYHRWDELLVPLRRGIRDAAARAGARLVALDCLYMYGRP CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC AASPFDEDAPLAPCSHKGELRALLARELLEAHARGDLRATTGRASDFFGPGAGAAALLGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHH RLAARLRAGKPFEAFGDPDLPHAYSYVADVARGLAVLGTHEAALGRAWHLPVSWTGSTRG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEECCEEECCCCHH LVEAVGAALGRPARLRIVPDWLLRVGGLLDPTLGAAVEMTYQWKVPYVPDDRRFRAAFSV HHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEC EPTPAAEAVAATARAILGAEAPAGRRDAA CCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA