Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915163
Identifier: 220915163
GI number: 220915163
Start: 42354
End: 42875
Strand: Reverse
Name: 220915163
Synonym: A2cp1_0040
Alternate gene names: NA
Gene position: 42875-42354 (Counterclockwise)
Preceding gene: 220915164
Following gene: 220915160
Centisome position: 0.85
GC content: 74.33
Gene sequence:
>522_bases TTGCACCTGGCATCCCGAGCCGCACCCGTCGTCCTCGCCGTCTCCCTCGTCACCGCCTGCGCCGGCGCGCGCGAGGCGGG TCGCGATCCGCCGCAGTCGCTCACCGTCCGCGAGCTGACCGTGGTGGACGCCCGCGGCCAGCCGCGCCTGCGCATCGGGG CGCCGCTGCCGCCGCCCAAGGGCGCCGAGCGCCGCGCGGTGGACGCGTTCGGGATCCAGTTCATGGACCAGGACGGCTAC GAGGTGGCGGGCCTCGGCATGCTCGAGCCGGTGGACATCCGCGGCCTCTGCTTCGACATCAAGGACGCGTACGAGGCGAT GTGCGTGGGCCTGGTGAAGGGCGAGCCCAGCATCACGTTCCGGCACGACTGGAAGGAGCGGATCACGCTCGGCGTCGAGA AGGGCGTGGCGAGCATCGTGCTGCGCGATGCGCAGGGGGAGCCGCGCGTCCGCCTCGAGGTGGACCCGGACGGCAAGACG CGGGTGGAGGGGGTCGCGCCCACGGCGCCGGCGCGGCCGTGA
Upstream 100 bases:
>100_bases CGGGAGCGCTGACCTCCGCCGGCCCCGAGCGGCACCGTGACTCCGCGTGAGGTCCGCGGAATGATGCGGCGGCCCACCCC TGGCCTCCGAGGAGCCGCCC
Downstream 100 bases:
>100_bases CCTCGGGTCACGCCGCCCGGACCGCTCGCCCCATCAGTACGACTTCGCCCAGACCACGCGCTTCGGGCTCGGCTGCCCCG TGAACGGGCAGGTGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MHLASRAAPVVLAVSLVTACAGAREAGRDPPQSLTVRELTVVDARGQPRLRIGAPLPPPKGAERRAVDAFGIQFMDQDGY EVAGLGMLEPVDIRGLCFDIKDAYEAMCVGLVKGEPSITFRHDWKERITLGVEKGVASIVLRDAQGEPRVRLEVDPDGKT RVEGVAPTAPARP
Sequences:
>Translated_173_residues MHLASRAAPVVLAVSLVTACAGAREAGRDPPQSLTVRELTVVDARGQPRLRIGAPLPPPKGAERRAVDAFGIQFMDQDGY EVAGLGMLEPVDIRGLCFDIKDAYEAMCVGLVKGEPSITFRHDWKERITLGVEKGVASIVLRDAQGEPRVRLEVDPDGKT RVEGVAPTAPARP >Mature_173_residues MHLASRAAPVVLAVSLVTACAGAREAGRDPPQSLTVRELTVVDARGQPRLRIGAPLPPPKGAERRAVDAFGIQFMDQDGY EVAGLGMLEPVDIRGLCFDIKDAYEAMCVGLVKGEPSITFRHDWKERITLGVEKGVASIVLRDAQGEPRVRLEVDPDGKT RVEGVAPTAPARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18546; Mature: 18546
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLASRAAPVVLAVSLVTACAGAREAGRDPPQSLTVRELTVVDARGQPRLRIGAPLPPPK CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCC GAERRAVDAFGIQFMDQDGYEVAGLGMLEPVDIRGLCFDIKDAYEAMCVGLVKGEPSITF CCCCCEEHHHCEEEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCEEE RHDWKERITLGVEKGVASIVLRDAQGEPRVRLEVDPDGKTRVEGVAPTAPARP ECCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCC >Mature Secondary Structure MHLASRAAPVVLAVSLVTACAGAREAGRDPPQSLTVRELTVVDARGQPRLRIGAPLPPPK CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCC GAERRAVDAFGIQFMDQDGYEVAGLGMLEPVDIRGLCFDIKDAYEAMCVGLVKGEPSITF CCCCCEEHHHCEEEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCEEE RHDWKERITLGVEKGVASIVLRDAQGEPRVRLEVDPDGKTRVEGVAPTAPARP ECCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA