Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905553
Identifier: 220905553
GI number: 220905553
Start: 2760383
End: 2760958
Strand: Reverse
Name: 220905553
Synonym: Ddes_2292
Alternate gene names: NA
Gene position: 2760958-2760383 (Counterclockwise)
Preceding gene: 220905554
Following gene: 220905551
Centisome position: 96.09
GC content: 59.2
Gene sequence:
>576_bases ATGGGCATTTCGTTCAGCCTCACGGATGCGGAGAAAAACTTTTTAAGCCGCCAGGCCAGGATGTCCATTGAAGCCGGTCT GCTGGGCAAGGCTGTACCTTCCATCCCCGAGCCGCCGGATACACTGGACAGACCCCAGGCCCCACTGATGCGGCCTCTTG GCGCCTTTGTAACCATTACCCTCCACCGTGCCCTGCGGGGCTGCATCGGCAATATTGTCGGCCGGGAACCGTTGTACAAG AGCGTCTGGCATCTGGCCGCAGCGGCCGCTTTCAGTGATCCCCGTTTTTCTCCCCTGACGCTGGAAGAGTGGCGTAAGGC CGAACTGGATATTTCGGTGCTGGGCGTGTTGCAGTCCTGCCCGAACCCAGAAAAAATAACGGTGGGGCTTCACGGCCTTG TCCTGCAATGGCAAGGGCACAGTGGCGTTTTTCTGCCGCAGGTTCCTGTGGATCAGGGCTGGGACCGCTTGGAATATCTG GAAAACCTTTGCCTCAAGGCCGGGCTGCCCAAGGGGTGTTGGCGAGCGCCGGGCGTGGACCTGTTTTGTTTTGAGGCGTT TGTTTTTCCGGCCTGA
Upstream 100 bases:
>100_bases GCCTTATAAAAGAAATGCCGCAACAACAGTTGCGGCATTTCTTGCTTTGTACAGTATTATTTTGCACTATATCGCAAAAC TGATACGGCAAGGAGTGAAC
Downstream 100 bases:
>100_bases TATGGAGAAAAACCGGCAGTGATGCGCCTGCAAGGGACGCTGGGGCCATCAATGAAGCGCCTGTTCCGCGGCACACCCTG AAGGTGTGCCGGGGCTGGCC
Product: AMMECR1 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MGISFSLTDAEKNFLSRQARMSIEAGLLGKAVPSIPEPPDTLDRPQAPLMRPLGAFVTITLHRALRGCIGNIVGREPLYK SVWHLAAAAAFSDPRFSPLTLEEWRKAELDISVLGVLQSCPNPEKITVGLHGLVLQWQGHSGVFLPQVPVDQGWDRLEYL ENLCLKAGLPKGCWRAPGVDLFCFEAFVFPA
Sequences:
>Translated_191_residues MGISFSLTDAEKNFLSRQARMSIEAGLLGKAVPSIPEPPDTLDRPQAPLMRPLGAFVTITLHRALRGCIGNIVGREPLYK SVWHLAAAAAFSDPRFSPLTLEEWRKAELDISVLGVLQSCPNPEKITVGLHGLVLQWQGHSGVFLPQVPVDQGWDRLEYL ENLCLKAGLPKGCWRAPGVDLFCFEAFVFPA >Mature_190_residues GISFSLTDAEKNFLSRQARMSIEAGLLGKAVPSIPEPPDTLDRPQAPLMRPLGAFVTITLHRALRGCIGNIVGREPLYKS VWHLAAAAAFSDPRFSPLTLEEWRKAELDISVLGVLQSCPNPEKITVGLHGLVLQWQGHSGVFLPQVPVDQGWDRLEYLE NLCLKAGLPKGCWRAPGVDLFCFEAFVFPA
Specific function: Unknown
COG id: COG2078
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 AMMECR1 domain [H]
Homologues:
Organism=Drosophila melanogaster, GI281362408, Length=138, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI24649478, Length=138, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI24649480, Length=138, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002733 [H]
Pfam domain/function: PF01871 AMMECR1 [H]
EC number: NA
Molecular weight: Translated: 20988; Mature: 20856
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS51112 AMMECR1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISFSLTDAEKNFLSRQARMSIEAGLLGKAVPSIPEPPDTLDRPQAPLMRPLGAFVTIT CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LHRALRGCIGNIVGREPLYKSVWHLAAAAAFSDPRFSPLTLEEWRKAELDISVLGVLQSC HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC PNPEKITVGLHGLVLQWQGHSGVFLPQVPVDQGWDRLEYLENLCLKAGLPKGCWRAPGVD CCCCEEEEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC LFCFEAFVFPA EEEEHHHHCCC >Mature Secondary Structure GISFSLTDAEKNFLSRQARMSIEAGLLGKAVPSIPEPPDTLDRPQAPLMRPLGAFVTIT CCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LHRALRGCIGNIVGREPLYKSVWHLAAAAAFSDPRFSPLTLEEWRKAELDISVLGVLQSC HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC PNPEKITVGLHGLVLQWQGHSGVFLPQVPVDQGWDRLEYLENLCLKAGLPKGCWRAPGVD CCCCEEEEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC LFCFEAFVFPA EEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]