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The map label for this gene is fliC [C]

Identifier: 220905541

GI number: 220905541

Start: 2744821

End: 2745708

Strand: Reverse

Name: fliC [C]

Synonym: Ddes_2280

Alternate gene names: 220905541

Gene position: 2745708-2744821 (Counterclockwise)

Preceding gene: 220905542

Following gene: 220905533

Centisome position: 95.55

GC content: 59.35

Gene sequence:

>888_bases
ATGTATATCAATCATAACCAGATGGCCACCCAGGTGGCCAACACGCTGACATCGCACTATGGCAACCTGTCAAATTCGGT
GCAGCGTTTGTCCACGGGCCTGCGCATCAACTCCGCGGCCGACGACGCCGCCGGCCTCGCCATCCGCGAACTGATGCGTA
CCGACATCGCCGCCCTGCAGCAGGGTGTCCGCAACGCCAACGATGCCATTTCCCTCATCCAGACCGCCGACGGCGCTCTG
GCCGTTATTGACGAAAAGCTCATACGCATGAAGGAACTGGCCGAACAGGCAGCCACCGGCACCTATGACTCCACACAGCG
CCTGATGATCGAATCGGAGTACCAGGCCATGGCTTCGGAAATTACCCGAATCGCCAATGCCACGGACTTCAACGGCATCT
ACCTGCTGAACGGCAACCTGTCGAGCGACACGCACAACGGCAGCGATCTTACAGCCACCGGCAAGCTGAAGGTGCACTTC
GGCAGCATGAACGACTCGGCTGAAGACTACTACTACATCAAGATCGGCAACAGCACCGCCTCTGCCCTGGGTGTGGGCAA
TCAGGCCGACAAGACATCTGCCGCCTACACGGTTTCCACGCAGGAAGCCGCGCAGAAGGCCCTTGTGGGCCTCAACGACG
CCGTGATCTCCAAGGACAAGATCCGCGCTCACCTTGGCGCGTTGCAGAACAGGCTGGAAAACACCATTTCCAACCTGACC
ACCCAGTCGCAGAATCTGCAGGCTGCCGAATCCCGCATTTCCGACGTGGACGTGGCCACGGAAATGACGGCGTTCGTACG
CAACCAGATCCTCACCCAGTCCGCTGTGGCCATGCTTTCGCAGGCCAACAGCATGCCCCAGATGGCGCTTTCGCTTATTT
CGAGGTAG

Upstream 100 bases:

>100_bases
TATGGTCGGGAACAGCCGATAGGACAAGCAAAGGCGGTATACGCAAGGACGCGTTGGCATTTCGCGCCGCCTATGACGTA
CAGCATTCATGGAGGAATGT

Downstream 100 bases:

>100_bases
GGCTGAAAACAGGTGGTGGAGGGCGTTTGCCCGGAACAGCCCTGCGGCAGGGGAGTGCTGCGCGGCTATAAAAAGCAGAA
CAGGCCGGTTCGTCAGATGA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MYINHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHF
GSMNDSAEDYYYIKIGNSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVISKDKIRAHLGALQNRLENTISNLT
TQSQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMALSLISR

Sequences:

>Translated_295_residues
MYINHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHF
GSMNDSAEDYYYIKIGNSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVISKDKIRAHLGALQNRLENTISNLT
TQSQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMALSLISR
>Mature_295_residues
MYINHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHF
GSMNDSAEDYYYIKIGNSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVISKDKIRAHLGALQNRLENTISNLT
TQSQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMALSLISR

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=140, Percent_Identity=43.5714285714286, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31628; Mature: 31628

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYINHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHH
QGVRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASE
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITRIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHFGSMNDSAEDYYYIKIGNSTA
HHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCH
SALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVISKDKIRAHLGALQNRLENTISNLT
HHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMALSLISR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MYINHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHH
QGVRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASE
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITRIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHFGSMNDSAEDYYYIKIGNSTA
HHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCH
SALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVISKDKIRAHLGALQNRLENTISNLT
HHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMALSLISR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3045083 [H]