Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220905492

Identifier: 220905492

GI number: 220905492

Start: 2689326

End: 2690030

Strand: Reverse

Name: 220905492

Synonym: Ddes_2230

Alternate gene names: NA

Gene position: 2690030-2689326 (Counterclockwise)

Preceding gene: 220905493

Following gene: 220905488

Centisome position: 93.62

GC content: 36.6

Gene sequence:

>705_bases
GTGGCGATACGCGGAAAACCTAAGATAATACTTGATGCCATTGTTAATGTGTTTGAATTATTAAAAAATTCTAACCTTAT
TTATTATTACAATCCGCCGCAAATTGACACTACGTTAGAAGAGGTCCTCATCACTTGGCCAAATCACGCACCTGGCCGTC
AAAATGCCCCGAGAGAATTCACTCGAATAAACTATTTCCTACATATCCTACGAGCTAGAAGTTTTTCAGCTATTTTATTC
GATGGCTCAATCATACGTATTTCCTACAAATTTTATAAGGAAAGTTTGGTCGAATATAATTTTTTATGGTGGCCATCCCC
CTTTTGCTTGGATTTTGATGAAACGCAAGGTTTAACCATGGACGAACTCGTGGAATGTTATATCGATTCACATAGTTGGC
ATGAGGATATTCAAATGCGCTCACCAATTAGATTCGATTACGATTGTGCTAGAGATGAAGATTTTCATCCGGCAAGTCAT
GTCCATATGCAGGATCCAGATTGCAGAATGCGAGTTTCACACCCCATCTGCTTAAATACTTTTTTAAAATTTATTTTCTG
TAATTTTTATTCAGAAAAATACCGATCTAATGATTTTTGGGATGACCTAGAGCCGATACGGATGTACAAATTTAATCGTA
AGATAGTTGAAGATAAATTTGTTACACTTGGCTGGACTGGAAGTCAGGAATACAAAATCATTTGA

Upstream 100 bases:

>100_bases
ATACGCTTCTTAAACAAATTGAATCTGGAAAATACCCTCTTGATAAAATTTCACAGCTCAACAAGGTGGTGGAGGAAATA
GCAAAAAAGGGTGAACTCTA

Downstream 100 bases:

>100_bases
TTTAGAAGCCACCAATTGCGACAGGATTGGTAATGGTTCCACGAGTTATTTCGAGTGACATCGTGATTTTCATTTTCAAG
CGCTCGTAATCATTATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILF
DGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASH
VHMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII

Sequences:

>Translated_234_residues
MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILF
DGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASH
VHMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII
>Mature_233_residues
AIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILFD
GSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHV
HMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII

Specific function: Unknown

COG id: COG5619

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28116; Mature: 27985

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREF
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHH
TRINYFLHILRARSFSAILFDGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTM
HHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHEEEEECCCCEEECCCCCCCCCH
DELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHVHMQDPDCRMRVSHPICLNT
HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH
FLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEC
>Mature Secondary Structure 
AIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREF
CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHH
TRINYFLHILRARSFSAILFDGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTM
HHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHEEEEECCCCEEECCCCCCCCCH
DELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHVHMQDPDCRMRVSHPICLNT
HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH
FLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA