Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905492
Identifier: 220905492
GI number: 220905492
Start: 2689326
End: 2690030
Strand: Reverse
Name: 220905492
Synonym: Ddes_2230
Alternate gene names: NA
Gene position: 2690030-2689326 (Counterclockwise)
Preceding gene: 220905493
Following gene: 220905488
Centisome position: 93.62
GC content: 36.6
Gene sequence:
>705_bases GTGGCGATACGCGGAAAACCTAAGATAATACTTGATGCCATTGTTAATGTGTTTGAATTATTAAAAAATTCTAACCTTAT TTATTATTACAATCCGCCGCAAATTGACACTACGTTAGAAGAGGTCCTCATCACTTGGCCAAATCACGCACCTGGCCGTC AAAATGCCCCGAGAGAATTCACTCGAATAAACTATTTCCTACATATCCTACGAGCTAGAAGTTTTTCAGCTATTTTATTC GATGGCTCAATCATACGTATTTCCTACAAATTTTATAAGGAAAGTTTGGTCGAATATAATTTTTTATGGTGGCCATCCCC CTTTTGCTTGGATTTTGATGAAACGCAAGGTTTAACCATGGACGAACTCGTGGAATGTTATATCGATTCACATAGTTGGC ATGAGGATATTCAAATGCGCTCACCAATTAGATTCGATTACGATTGTGCTAGAGATGAAGATTTTCATCCGGCAAGTCAT GTCCATATGCAGGATCCAGATTGCAGAATGCGAGTTTCACACCCCATCTGCTTAAATACTTTTTTAAAATTTATTTTCTG TAATTTTTATTCAGAAAAATACCGATCTAATGATTTTTGGGATGACCTAGAGCCGATACGGATGTACAAATTTAATCGTA AGATAGTTGAAGATAAATTTGTTACACTTGGCTGGACTGGAAGTCAGGAATACAAAATCATTTGA
Upstream 100 bases:
>100_bases ATACGCTTCTTAAACAAATTGAATCTGGAAAATACCCTCTTGATAAAATTTCACAGCTCAACAAGGTGGTGGAGGAAATA GCAAAAAAGGGTGAACTCTA
Downstream 100 bases:
>100_bases TTTAGAAGCCACCAATTGCGACAGGATTGGTAATGGTTCCACGAGTTATTTCGAGTGACATCGTGATTTTCATTTTCAAG CGCTCGTAATCATTATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILF DGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASH VHMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII
Sequences:
>Translated_234_residues MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILF DGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASH VHMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII >Mature_233_residues AIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREFTRINYFLHILRARSFSAILFD GSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTMDELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHV HMQDPDCRMRVSHPICLNTFLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII
Specific function: Unknown
COG id: COG5619
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28116; Mature: 27985
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREF CCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHH TRINYFLHILRARSFSAILFDGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTM HHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHEEEEECCCCEEECCCCCCCCCH DELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHVHMQDPDCRMRVSHPICLNT HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH FLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEC >Mature Secondary Structure AIRGKPKIILDAIVNVFELLKNSNLIYYYNPPQIDTTLEEVLITWPNHAPGRQNAPREF CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHH TRINYFLHILRARSFSAILFDGSIIRISYKFYKESLVEYNFLWWPSPFCLDFDETQGLTM HHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHEEEEECCCCEEECCCCCCCCCH DELVECYIDSHSWHEDIQMRSPIRFDYDCARDEDFHPASHVHMQDPDCRMRVSHPICLNT HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH FLKFIFCNFYSEKYRSNDFWDDLEPIRMYKFNRKIVEDKFVTLGWTGSQEYKII HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA