Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905473
Identifier: 220905473
GI number: 220905473
Start: 2665762
End: 2667393
Strand: Reverse
Name: 220905473
Synonym: Ddes_2211
Alternate gene names: NA
Gene position: 2667393-2665762 (Counterclockwise)
Preceding gene: 220905474
Following gene: 220905472
Centisome position: 92.83
GC content: 59.62
Gene sequence:
>1632_bases GTGAAAGAACGCTGTATTGTCATACCGGCCATCAAAAAAAATGCCGTCATCCCTGATCAGCTTGTCAAAAAGCTGGCTGG GGTGACGCTTGTGCAGCGGGCCATCAATACGGCGCGGGGCGTTCTGCCCGGCGAAGATATCGTGGTGCTTACCGACAGTC AGGAAATATCCCTCATCTGCGAACGCGCGGGCGTGGGCTTTCGTCGCAACAAGGACATGCACTTTACCACGCTGGATATC GTGAGCGAAATGCGTGTGCTGCTGGAAGAACTGGCGGAGCAGTATGAACACTGCATTATCCTGCGCGCTTCCTGTCCGCT CTTGACCTGGGTGGATGTGGAAGACGCCTGGAAAAGATACCGCGAGGCGGACGCCGACAGCCTTGTAACCGTGAAAAGCG TGCGTCAGCGCATCTGGAACATGCAGGGCGACGGCCTTGAAGACCTGCTGGACGATGATGCGGACCACAAGGGCGAAAAA ACCCTTGTGGTCGAGAGCCGCGCACTCATCATGCTGCGCCTGTCACGCCTGCTGGGCCGGAACAGCAACCAGGGGCGCGG GCGCATCATTCCCTATTTTCTCAACGACAGGGCCATTGAAATACAGGGTTATCAGGACTGGTGGATATGCGAACGCCTGC TTGAGCGGCGGCATGTGGTCTTTGTGGTGGCGGGCTGGCCCGCCATCGGCATGGGGCATGTGTTCCGGGCGCTCATGCTG GCGCACGAGATCACAAGCCACCGGGTAAGCTTTGTCTGCACCCGTGAAAGCGAGCTGGCCGTAGAAAGTGTTGCCCGCAA GGATTACCGGATTGTCCGTCAGGGCCAGGAAGACCTGGCAGACACCGTGCTGGCCCTGGGACCTGACCTGGTGGTCAATG ACATTCTCAATACGACCACGGCCTATATGAAGCGCCTTGCCGCGGCAGGGGTGCGCTGCGTGAACTTTGAAGACGAAGGG CCGGGAGCTTCTCTGGCGCGTCTTGTGGTTAATGCCCTGTACGAGGGAGAAAGTACCGACCGCCTGTGCAGCGGGCCGGA TTTTTTCTGCCTGCGTGACGAATTTGTCAATGCGGCCCGCAATCCTTTCCGCCCCGAGGTGAAAACCGTACTCATCACCT TTGGCGGCACAGACCAGCATGACTGCTCGCGCCGGGTGCTGGACATCATCGAGCCTGTCTGCCGCGCCTACGATATTGCC ATCCGGCTGGTTGCCGGACCGGGCTACGCCCACAAGGACGCCATGGAGGCGCATCTGAAAAAACTGGATAATCCGCTGGT GACTTTCACCTGGGCCACCAATGTCATGAGCCGCATGATGGAAGGCGCGGATCTCGCCATCTGTTCCGCCGGGCGCACGG TCTACGAACTGGCCCATATGCGTGTGCCTGCCCTTGTGCTGGCCACGCACGAGCGCGAGGCGCGCCATACCTTTGCCCGG CCGCGTCACGGTTTTGCCTTTGTGGGCATTATGGACCGCGTGGGCGACGGCAGAATTCGCAACACCTTTCTGGCAATGCT GAAAAATCCGCGCCGCGAGCGTTTCTGGCAACGGCAGGACAGCATGGATTTTACGGTCAACAAGAATCGTGTGGTGCGGC GCATGCTGGGCCTGCTCAGCGAGCGGCCCTAG
Upstream 100 bases:
>100_bases GGCGCCATTTTGAACGGGGCGCAGACCTACGCCGCCCGCCGCCGCTGGCGGCCGCTCATGACAGGTGCCGTGCCCAGCGC ATGACATATCCGGAAATATC
Downstream 100 bases:
>100_bases GCAGTGCCCGGAGCAGGCTATTAGTAAAATATCTTGTGGGGGAAGGGGCTTCAGAGCGTGAATGGTTGAAATGCGTTGTG AGGGAGAGACCCTTTTGCAA
Product: cytidine 5'monophosphate N-acetylneuraminic acid synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKERCIVIPAIKKNAVIPDQLVKKLAGVTLVQRAINTARGVLPGEDIVVLTDSQEISLICERAGVGFRRNKDMHFTTLDI VSEMRVLLEELAEQYEHCIILRASCPLLTWVDVEDAWKRYREADADSLVTVKSVRQRIWNMQGDGLEDLLDDDADHKGEK TLVVESRALIMLRLSRLLGRNSNQGRGRIIPYFLNDRAIEIQGYQDWWICERLLERRHVVFVVAGWPAIGMGHVFRALML AHEITSHRVSFVCTRESELAVESVARKDYRIVRQGQEDLADTVLALGPDLVVNDILNTTTAYMKRLAAAGVRCVNFEDEG PGASLARLVVNALYEGESTDRLCSGPDFFCLRDEFVNAARNPFRPEVKTVLITFGGTDQHDCSRRVLDIIEPVCRAYDIA IRLVAGPGYAHKDAMEAHLKKLDNPLVTFTWATNVMSRMMEGADLAICSAGRTVYELAHMRVPALVLATHEREARHTFAR PRHGFAFVGIMDRVGDGRIRNTFLAMLKNPRRERFWQRQDSMDFTVNKNRVVRRMLGLLSERP
Sequences:
>Translated_543_residues MKERCIVIPAIKKNAVIPDQLVKKLAGVTLVQRAINTARGVLPGEDIVVLTDSQEISLICERAGVGFRRNKDMHFTTLDI VSEMRVLLEELAEQYEHCIILRASCPLLTWVDVEDAWKRYREADADSLVTVKSVRQRIWNMQGDGLEDLLDDDADHKGEK TLVVESRALIMLRLSRLLGRNSNQGRGRIIPYFLNDRAIEIQGYQDWWICERLLERRHVVFVVAGWPAIGMGHVFRALML AHEITSHRVSFVCTRESELAVESVARKDYRIVRQGQEDLADTVLALGPDLVVNDILNTTTAYMKRLAAAGVRCVNFEDEG PGASLARLVVNALYEGESTDRLCSGPDFFCLRDEFVNAARNPFRPEVKTVLITFGGTDQHDCSRRVLDIIEPVCRAYDIA IRLVAGPGYAHKDAMEAHLKKLDNPLVTFTWATNVMSRMMEGADLAICSAGRTVYELAHMRVPALVLATHEREARHTFAR PRHGFAFVGIMDRVGDGRIRNTFLAMLKNPRRERFWQRQDSMDFTVNKNRVVRRMLGLLSERP >Mature_543_residues MKERCIVIPAIKKNAVIPDQLVKKLAGVTLVQRAINTARGVLPGEDIVVLTDSQEISLICERAGVGFRRNKDMHFTTLDI VSEMRVLLEELAEQYEHCIILRASCPLLTWVDVEDAWKRYREADADSLVTVKSVRQRIWNMQGDGLEDLLDDDADHKGEK TLVVESRALIMLRLSRLLGRNSNQGRGRIIPYFLNDRAIEIQGYQDWWICERLLERRHVVFVVAGWPAIGMGHVFRALML AHEITSHRVSFVCTRESELAVESVARKDYRIVRQGQEDLADTVLALGPDLVVNDILNTTTAYMKRLAAAGVRCVNFEDEG PGASLARLVVNALYEGESTDRLCSGPDFFCLRDEFVNAARNPFRPEVKTVLITFGGTDQHDCSRRVLDIIEPVCRAYDIA IRLVAGPGYAHKDAMEAHLKKLDNPLVTFTWATNVMSRMMEGADLAICSAGRTVYELAHMRVPALVLATHEREARHTFAR PRHGFAFVGIMDRVGDGRIRNTFLAMLKNPRRERFWQRQDSMDFTVNKNRVVRRMLGLLSERP
Specific function: Unknown
COG id: COG3980
COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR007235 - InterPro: IPR020023 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF04101 Glyco_tran_28_C [H]
EC number: NA
Molecular weight: Translated: 61577; Mature: 61577
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERCIVIPAIKKNAVIPDQLVKKLAGVTLVQRAINTARGVLPGEDIVVLTDSQEISLIC CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH ERAGVGFRRNKDMHFTTLDIVSEMRVLLEELAEQYEHCIILRASCPLLTWVDVEDAWKRY HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECHHHHHHHH READADSLVTVKSVRQRIWNMQGDGLEDLLDDDADHKGEKTLVVESRALIMLRLSRLLGR HHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCC NSNQGRGRIIPYFLNDRAIEIQGYQDWWICERLLERRHVVFVVAGWPAIGMGHVFRALML CCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH AHEITSHRVSFVCTRESELAVESVARKDYRIVRQGQEDLADTVLALGPDLVVNDILNTTT HHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHH AYMKRLAAAGVRCVNFEDEGPGASLARLVVNALYEGESTDRLCSGPDFFCLRDEFVNAAR HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHC NPFRPEVKTVLITFGGTDQHDCSRRVLDIIEPVCRAYDIAIRLVAGPGYAHKDAMEAHLK CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH KLDNPLVTFTWATNVMSRMMEGADLAICSAGRTVYELAHMRVPALVLATHEREARHTFAR HCCCCEEEEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEEEEECCHHHHHHHCC PRHGFAFVGIMDRVGDGRIRNTFLAMLKNPRRERFWQRQDSMDFTVNKNRVVRRMLGLLS CCCCEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHC ERP CCC >Mature Secondary Structure MKERCIVIPAIKKNAVIPDQLVKKLAGVTLVQRAINTARGVLPGEDIVVLTDSQEISLIC CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH ERAGVGFRRNKDMHFTTLDIVSEMRVLLEELAEQYEHCIILRASCPLLTWVDVEDAWKRY HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECHHHHHHHH READADSLVTVKSVRQRIWNMQGDGLEDLLDDDADHKGEKTLVVESRALIMLRLSRLLGR HHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCC NSNQGRGRIIPYFLNDRAIEIQGYQDWWICERLLERRHVVFVVAGWPAIGMGHVFRALML CCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH AHEITSHRVSFVCTRESELAVESVARKDYRIVRQGQEDLADTVLALGPDLVVNDILNTTT HHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHH AYMKRLAAAGVRCVNFEDEGPGASLARLVVNALYEGESTDRLCSGPDFFCLRDEFVNAAR HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHC NPFRPEVKTVLITFGGTDQHDCSRRVLDIIEPVCRAYDIAIRLVAGPGYAHKDAMEAHLK CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH KLDNPLVTFTWATNVMSRMMEGADLAICSAGRTVYELAHMRVPALVLATHEREARHTFAR HCCCCEEEEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEEEEECCHHHHHHHCC PRHGFAFVGIMDRVGDGRIRNTFLAMLKNPRRERFWQRQDSMDFTVNKNRVVRRMLGLLS CCCCEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHC ERP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]